pycom15g19260

ankyrin repeat-containing protein

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr15
N/A
Physical Location & Seq
Forward (+)
13718035 .. 13718220
186 bp
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UTR
Exon/CDS
Intron
N/A

Sequence Viewer

Length: 186 bp
ATGGTGGCATTTGGTGCAACACTTTCGATTGTGCTCAGCAAGAGATTCAACTGGGTTTCCGTCCCAATCACCTTGCTGGCAAGTATTCCGGTGACTCTTTTTGCCCTGCTGCAGCTTCCCTTGTTTATCCAAATGGTCCGATCCACGTTTGGACAGAGTATCTTTCGCCCTAAAAAACATAGGTAA

Protein Analysis

62

Amino Acids

6.89

Weight (kDa)

12.0

Isoelectric Point (pI)

41.84

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Orthologous Genes

No orthologs found for this gene in the current database.

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AclWI GGATC 1 cut(s) 135
AgsI TTSAA 1 cut(s) 49
AluBI AGCT 1 cut(s) 115
AluI AGCT 1 cut(s) 115
Alw21I GWGCWC 1 cut(s) 36
AlwI GGATC 1 cut(s) 135
ApeKI GCWGC 2 cut(s) 109, 112
AspS9I GGNCC 1 cut(s) 136
AsuHPI GGTGA 2 cut(s) 61, 103
AvaII GGWCC 1 cut(s) 136
Bbv12I GWGCWC 1 cut(s) 36
BbvI GCAGC 2 cut(s) 96, 124
BcgI CGANNNNNNTGC 2 cut(s) 6, 40
BfmI CTRYAG 1 cut(s) 110
BisI GCNGC 2 cut(s) 110, 113
BlpI GCTNAGC 1 cut(s) 35
BlsI GCNGC 2 cut(s) 111, 114
Bme18I GGWCC 1 cut(s) 136
BmgT120I GGNCC 1 cut(s) 136
BmrI ACTGGG 1 cut(s) 61
BmuI ACTGGG 1 cut(s) 61
Bpu1102I GCTNAGC 1 cut(s) 35
BsaWI WCCGGW 1 cut(s) 88
Bse1I ACTGG 1 cut(s) 56
BseMII CTCAG 1 cut(s) 49
BseNI ACTGG 1 cut(s) 56
BseXI GCAGC 2 cut(s) 96, 124
BsiHKAI GWGCWC 1 cut(s) 36
BsiSI CCGG 1 cut(s) 89
BslFI GGGAC 1 cut(s) 47
BsmFI GGGAC 1 cut(s) 47
Bsp1286I GDGCHC 1 cut(s) 36
Bsp143I GATC 1 cut(s) 140
Bsp1720I GCTNAGC 1 cut(s) 35
BspCNI CTCAG 1 cut(s) 48
BspMAI CTGCAG 1 cut(s) 114
BspPI GGATC 1 cut(s) 135
BsrI ACTGG 1 cut(s) 56
BssMI GATC 1 cut(s) 140
BstAPI GCANNNNNTGC 1 cut(s) 14
BstC8I GCNNGC 1 cut(s) 78
BstDEI CTNAG 1 cut(s) 35
BstKTI GATC 1 cut(s) 143
BstMBI GATC 1 cut(s) 140
BstMWI GCNNNNNNNGC 1 cut(s) 14
BstSFI CTRYAG 1 cut(s) 110
BstV1I GCAGC 2 cut(s) 96, 124
Cac8I GCNNGC 1 cut(s) 78
Cfr13I GGNCC 1 cut(s) 136
CviJI RGCY 1 cut(s) 115
CviKI_1 RGCY 1 cut(s) 115
DdeI CTNAG 1 cut(s) 35
DpnI GATC 1 cut(s) 142
DpnII GATC 1 cut(s) 140
Eco47I GGWCC 1 cut(s) 136
FaiI YATR 1 cut(s) 180
FaqI GGGAC 1 cut(s) 47
Fnu4HI GCNGC 2 cut(s) 110, 113
Fsp4HI GCNGC 2 cut(s) 110, 113
GluI GCNGC 2 cut(s) 110, 113
HapII CCGG 1 cut(s) 89
HinfI GANTC 2 cut(s) 45, 94
HpaII CCGG 1 cut(s) 89
HphI GGTGA 2 cut(s) 61, 103
Hpy188I TCNGA 1 cut(s) 140
HpyCH4IV ACGT 1 cut(s) 146
HpyCH4V TGCA 2 cut(s) 17, 112
HpyF10VI GCNNNNNNNGC 1 cut(s) 14
HpyF3I CTNAG 1 cut(s) 35
HpySE526I ACGT 1 cut(s) 146
Kzo9I GATC 1 cut(s) 140
LpnPI CCDG 4 cut(s) 37, 62, 102, 119
Lsp1109I GCAGC 2 cut(s) 96, 124
MaeII ACGT 1 cut(s) 146
MaeIII GTNAC 1 cut(s) 91
MalI GATC 1 cut(s) 142
MboI GATC 1 cut(s) 140
MhlI GDGCHC 1 cut(s) 36
MlyI GAGTC 1 cut(s) 88
MspI CCGG 1 cut(s) 89
MwoI GCNNNNNNNGC 1 cut(s) 14
NdeII GATC 1 cut(s) 140
NmuCI GTSAC 1 cut(s) 91
PfeI GAWTC 1 cut(s) 45
PkrI GCNGC 2 cut(s) 111, 114
PleI GAGTC 1 cut(s) 88
PpsI GAGTC 1 cut(s) 88
PspPI GGNCC 1 cut(s) 136
PstI CTGCAG 1 cut(s) 114
SatI GCNGC 2 cut(s) 110, 113
Sau3AI GATC 1 cut(s) 140
Sau96I GGNCC 1 cut(s) 136
SchI GAGTC 1 cut(s) 88
SduI GDGCHC 1 cut(s) 36
SetI ASST 4 cut(s) 74, 117, 149, 185
SfcI CTRYAG 1 cut(s) 110
SgeI CNNG 9 cut(s) 52, 64, 85, 89, 93, 101, 118, 133, 157
SinI GGWCC 1 cut(s) 136
TaiI ACGT 1 cut(s) 149
TaqI TCGA 1 cut(s) 26
TfiI GAWTC 1 cut(s) 45
TseFI GTSAC 1 cut(s) 91
TseI GCWGC 2 cut(s) 109, 112
Tsp45I GTSAC 1 cut(s) 91
TspGWI ACGGA 1 cut(s) 49
VpaK11BI GGWCC 1 cut(s) 136
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.