pycom15g19710

The pyruvate dehydrogenase complex catalyzes the overall conversion of pyruvate to acetyl-CoA and CO(2)

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr15
N/A
Physical Location & Seq
Forward (+)
14137482 .. 14138177
696 bp
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UTR
Exon/CDS
Intron
N/A

Sequence Viewer

Length: 624 bp
ATGTCATACCTCTATCATAAAAAATTATTAAATATATTTTTAATAATTAAAAATAATTTTTTTATATTAAATCTCTCTCTCGCCTGTCGCATCCCCAAACCCCTTCCCCCCCCCCCCCCCCCCCCCGACCCCTTCCCACCCGTCCCCCCCAACCTTCCTCCACCACCCTCTTTATTGCCTCTCTCTCTCTCTTCTTTCTCTTTGGACAAGTATCGGGGATCCACCCCTAACCCACCTAAAGTCTACTTCCTCCCCACTTCTCTCTCTCGCCGTGCCCAAAACCCCCCAAACCCACCTGGATTTTTTCATCCGCCCTCCTTTCTCGGATCTACCTGTAAGCTCCAACCCGTTTCCCTCTCCCACTCCATTGCCCATCGCCGATCCGCCGTCGTTGCCGTCTCCAAAGCTGTCAAGGAGAAAGGGAGAGAGGGAGAGCTGTCAAGGTCGGGGCCGACGAGGCTTCTGTTACAGCATGAAAGGGTGAAAGGGAGAGAGAATACGAGAGGAAAGAGGACGGCGGATGAAAAAACCCAGGTGGGTTTGGGGGGTTCTGGGCACAGCGAGAGAGAAGTGGGGAGGAAGGAGACTACGGTGGAGAGGAGAGGGAGAGACGATGGAAGATAG

Protein Analysis

208

Amino Acids

22.91

Weight (kDa)

10.59

Isoelectric Point (pI)

54.44

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Orthologous Genes

No orthologs found for this gene in the current database.

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccI GTMKAC 1 cut(s) 243
AciI CCGC 3 cut(s) 311, 384, 518
AclWI GGATC 4 cut(s) 213, 226, 334, 375
AjnI CCWGG 2 cut(s) 295, 531
AluBI AGCT 3 cut(s) 340, 407, 436
AluI AGCT 3 cut(s) 340, 407, 436
Alw26I GTCTC 3 cut(s) 403, 578, 603
AlwI GGATC 4 cut(s) 213, 226, 334, 375
AoxI GGCC 1 cut(s) 449
AspS9I GGNCC 1 cut(s) 449
AsuHPI GGTGA 1 cut(s) 493
BaeGI GKGCMC 2 cut(s) 277, 558
BamHI GGATCC 1 cut(s) 218
BccI CCATC 2 cut(s) 381, 608
BceAI ACGGC 4 cut(s) 255, 371, 380, 531
BciT130I CCWGG 2 cut(s) 297, 533
BcoDI GTCTC 3 cut(s) 403, 578, 603
BglI GCCNNNNNGGC 1 cut(s) 457
Bme1390I CCNGG 2 cut(s) 297, 533
BmgT120I GGNCC 1 cut(s) 449
BmiI GGNNCC 2 cut(s) 220, 450
BmrFI CCNGG 2 cut(s) 297, 533
BmsI GCATC 1 cut(s) 99
BsaJI CCNNGG 1 cut(s) 531
Bse3DI GCAATG 1 cut(s) 366
BseBI CCWGG 2 cut(s) 297, 533
BseDI CCNNGG 1 cut(s) 531
BseGI GGATG 3 cut(s) 90, 307, 526
BseMI GCAATG 1 cut(s) 366
BseRI GAGGAG 1 cut(s) 613
BseSI GKGCMC 2 cut(s) 277, 558
BshFI GGCC 1 cut(s) 451
BslFI GGGAC 1 cut(s) 128
BsmAI GTCTC 3 cut(s) 403, 578, 603
BsmBI CGTCTC 2 cut(s) 403, 603
BsmFI GGGAC 1 cut(s) 128
BsnI GGCC 1 cut(s) 451
Bsp1286I GDGCHC 2 cut(s) 277, 558
Bsp143I GATC 3 cut(s) 218, 326, 380
BspACI CCGC 3 cut(s) 311, 384, 518
BspANI GGCC 1 cut(s) 451
BspLI GGNNCC 2 cut(s) 220, 450
BspPI GGATC 4 cut(s) 213, 226, 334, 375
BsrDI GCAATG 1 cut(s) 366
BssECI CCNNGG 1 cut(s) 531
BssMI GATC 3 cut(s) 218, 326, 380
Bst2UI CCWGG 2 cut(s) 297, 533
Bst4CI ACNGT 1 cut(s) 592
Bst6I CTCTTC 1 cut(s) 196
BstF5I GGATG 3 cut(s) 90, 307, 526
BstKTI GATC 3 cut(s) 221, 329, 383
BstMAI GTCTC 3 cut(s) 403, 578, 603
BstMBI GATC 3 cut(s) 218, 326, 380
BstMWI GCNNNNNNNGC 2 cut(s) 392, 457
BstNI CCWGG 2 cut(s) 297, 533
BstSCI CCNGG 2 cut(s) 295, 531
BstSLI GKGCMC 2 cut(s) 277, 558
BstX2I RGATCY 2 cut(s) 218, 326
BstYI RGATCY 2 cut(s) 218, 326
BsuRI GGCC 1 cut(s) 451
BtgZI GCGATG 1 cut(s) 359
BtsCI GGATG 3 cut(s) 90, 307, 526
Cfr13I GGNCC 1 cut(s) 449
CviAII CATG 1 cut(s) 473
CviJI RGCY 5 cut(s) 340, 407, 436, 451, 460
CviKI_1 RGCY 5 cut(s) 340, 407, 436, 451, 460
DpnI GATC 3 cut(s) 220, 328, 382
DpnII GATC 3 cut(s) 218, 326, 380
Eam1104I CTCTTC 1 cut(s) 196
EarI CTCTTC 1 cut(s) 196
EciI GGCGGA 3 cut(s) 300, 373, 533
EcoRII CCWGG 2 cut(s) 295, 531
Esp3I CGTCTC 2 cut(s) 403, 603
FaeI CATG 1 cut(s) 476
FaiI YATR 5 cut(s) 7, 18, 35, 65, 474
FaqI GGGAC 1 cut(s) 128
FatI CATG 1 cut(s) 472
FblI GTMKAC 1 cut(s) 243
FokI GGATG 3 cut(s) 77, 294, 533
HaeIII GGCC 1 cut(s) 451
Hin1II CATG 1 cut(s) 476
HphI GGTGA 1 cut(s) 493
Hpy166II GTNNAC 1 cut(s) 244
Hpy188I TCNGA 1 cut(s) 326
Hpy8I GTNNAC 1 cut(s) 244
Hpy99I CGWCG 2 cut(s) 392, 457
HpyAV CCTTC 4 cut(s) 113, 142, 164, 574
HpyCH4III ACNGT 1 cut(s) 592
HpyF10VI GCNNNNNNNGC 2 cut(s) 392, 457
Hsp92II CATG 1 cut(s) 476
Kzo9I GATC 3 cut(s) 218, 326, 380
LmnI GCTCC 1 cut(s) 345
LpnPI CCDG 7 cut(s) 97, 282, 309, 346, 518, 537, 545
LweI GCATC 1 cut(s) 99
MaeIII GTNAC 1 cut(s) 465
MalI GATC 3 cut(s) 220, 328, 382
MboI GATC 3 cut(s) 218, 326, 380
MboII GAAGA 1 cut(s) 183
MflI RGATCY 2 cut(s) 218, 326
MhlI GDGCHC 2 cut(s) 277, 558
MluCI AATT 3 cut(s) 23, 45, 55
MmeI TCCRAC 1 cut(s) 367
MseI TTAA 4 cut(s) 29, 41, 48, 68
MspR9I CCNGG 2 cut(s) 297, 533
MvaI CCWGG 2 cut(s) 297, 533
MwoI GCNNNNNNNGC 2 cut(s) 392, 457
NdeII GATC 3 cut(s) 218, 326, 380
NlaIII CATG 1 cut(s) 476
NlaIV GGNNCC 2 cut(s) 220, 450
PcsI WCGNNNNNNNCGW 1 cut(s) 452
Psp6I CCWGG 2 cut(s) 295, 531
PspGI CCWGG 2 cut(s) 295, 531
PspN4I GGNNCC 2 cut(s) 220, 450
PspPI GGNCC 1 cut(s) 449
PsuI RGATCY 2 cut(s) 218, 326
SaqAI TTAA 4 cut(s) 29, 41, 48, 68
Sau3AI GATC 3 cut(s) 218, 326, 380
Sau96I GGNCC 1 cut(s) 449
ScrFI CCNGG 2 cut(s) 297, 533
SduI GDGCHC 2 cut(s) 277, 558
SfaNI GCATC 1 cut(s) 99
Sse9I AATT 3 cut(s) 23, 45, 55
SsiI CCGC 3 cut(s) 311, 384, 518
StyD4I CCNGG 2 cut(s) 295, 531
TaaI ACNGT 1 cut(s) 592
TasI AATT 3 cut(s) 23, 45, 55
Tru1I TTAA 4 cut(s) 29, 41, 48, 68
Tru9I TTAA 4 cut(s) 29, 41, 48, 68
TspDTI ATGAA 3 cut(s) 296, 489, 537
XmiI GTMKAC 1 cut(s) 243
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.