pycom15g22860

Maf-like protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr15
N/A
Physical Location & Seq
Reverse (-)
16922323 .. 16922948
626 bp
Loading structure...
UTR
Exon/CDS
Intron
N/A

Sequence Viewer

Length: 456 bp
ATGTGCTTTGCAGTTGAGGTTATATCTCACTGCAAAATCTTTATTGATTTTGAGGTTGTGGTGTGTGAAGGGATAATAAGGGAAAAACCATCCAGCAAGGAAGAAGCATGGAATTTTATCGAAGGTTTGGTTAAAAGGAAACCGTCCACCACTTTCCCTTTGTTAAAGTCTCAGATGGATGTGCAGTGGTCAAGTGTTTATGGATGGATTGCAGGCTATTCTGGTGGTCAAGCAGCAGTCATAGGATCTGTACTTGAAACCAACCTTAAAACTGGAAAAAGAAAAGGCGGTTGGCGCAGAGCGGAGGTTTATTTTCATGTCATACCAGGAGGTGATCGACAGCCTGGTAAATTTTGGATACAAATTCACTTTAGGCACTTCGTTGTGAACAATTCTGTGTTGAATATGGTTCATGAGTCTGATGTTCGGCCAGATGGAGGAGGGAATTACGCTTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
Maf

Protein Analysis

152

Amino Acids

17.0

Weight (kDa)

8.81

Isoelectric Point (pI)

33.46

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes

No orthologs found for this gene in the current database.

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccBSI CCGCTC 1 cut(s) 302
AciI CCGC 2 cut(s) 288, 302
AclWI GGATC 1 cut(s) 253
AcoI YGGCCR 1 cut(s) 428
AcsI RAATTY 3 cut(s) 112, 350, 363
AfaI GTAC 1 cut(s) 252
AfiI CCNNNNNNNGG 1 cut(s) 437
AgsI TTSAA 2 cut(s) 257, 403
AjnI CCWGG 2 cut(s) 325, 343
AjuI GAANNNNNNNTTGG 2 cut(s) 274, 306
Alw26I GTCTC 1 cut(s) 174
AlwI GGATC 1 cut(s) 253
AoxI GGCC 1 cut(s) 428
ApeKI GCWGC 1 cut(s) 233
ApoI RAATTY 3 cut(s) 112, 350, 363
AspLEI GCGC 1 cut(s) 297
AsuHPI GGTGA 1 cut(s) 344
BbvI GCAGC 1 cut(s) 245
BccI CCATC 4 cut(s) 97, 169, 198, 428
BciT130I CCWGG 2 cut(s) 327, 345
BciVI GTATCC 1 cut(s) 351
BcoDI GTCTC 1 cut(s) 174
BfuI GTATCC 1 cut(s) 351
BisI GCNGC 1 cut(s) 234
BlsI GCNGC 1 cut(s) 235
Bme1390I CCNGG 2 cut(s) 327, 345
BmrFI CCNGG 2 cut(s) 327, 345
Bsc4I CCNNNNNNNGG 1 cut(s) 437
Bse1I ACTGG 1 cut(s) 277
BseBI CCWGG 2 cut(s) 327, 345
BseGI GGATG 3 cut(s) 89, 184, 209
BseLI CCNNNNNNNGG 1 cut(s) 437
BseMII CTCAG 1 cut(s) 185
BseNI ACTGG 1 cut(s) 277
BseRI GAGGAG 1 cut(s) 453
BseXI GCAGC 1 cut(s) 245
BsgI GTGCAG 1 cut(s) 203
BshFI GGCC 1 cut(s) 430
BslI CCNNNNNNNGG 1 cut(s) 437
BsmAI GTCTC 1 cut(s) 174
BsnI GGCC 1 cut(s) 430
Bsp143I GATC 2 cut(s) 245, 334
BspACI CCGC 2 cut(s) 288, 302
BspANI GGCC 1 cut(s) 430
BspCNI CTCAG 1 cut(s) 184
BspHI TCATGA 1 cut(s) 412
BspPI GGATC 1 cut(s) 253
BsrBI CCGCTC 1 cut(s) 302
BsrI ACTGG 1 cut(s) 277
BssMI GATC 2 cut(s) 245, 334
Bst2UI CCWGG 2 cut(s) 327, 345
Bst4CI ACNGT 1 cut(s) 144
BstC8I GCNNGC 1 cut(s) 214
BstDEI CTNAG 1 cut(s) 171
BstF5I GGATG 3 cut(s) 89, 184, 209
BstHHI GCGC 1 cut(s) 297
BstKTI GATC 2 cut(s) 248, 337
BstMAI GTCTC 1 cut(s) 174
BstMBI GATC 2 cut(s) 245, 334
BstMWI GCNNNNNNNGC 1 cut(s) 294
BstNI CCWGG 2 cut(s) 327, 345
BstSCI CCNGG 2 cut(s) 325, 343
BstV1I GCAGC 1 cut(s) 245
BstX2I RGATCY 1 cut(s) 245
BstYI RGATCY 1 cut(s) 245
BsuI GTATCC 1 cut(s) 351
BsuRI GGCC 1 cut(s) 430
BtsCI GGATG 3 cut(s) 89, 184, 209
BtsI GCAGTG 2 cut(s) 28, 191
BtsIMutI CAGTG 2 cut(s) 28, 191
Cac8I GCNNGC 1 cut(s) 214
CciI TCATGA 1 cut(s) 412
CfoI GCGC 1 cut(s) 297
Csp6I GTAC 1 cut(s) 251
CviAII CATG 3 cut(s) 108, 317, 413
CviJI RGCY 3 cut(s) 216, 343, 430
CviKI_1 RGCY 3 cut(s) 216, 343, 430
CviQI GTAC 1 cut(s) 251
DdeI CTNAG 1 cut(s) 171
DpnI GATC 2 cut(s) 247, 336
DpnII GATC 2 cut(s) 245, 334
EaeI YGGCCR 1 cut(s) 428
EcoRII CCWGG 2 cut(s) 325, 343
FaeI CATG 3 cut(s) 111, 320, 416
FaiI YATR 8 cut(s) 23, 109, 201, 242, 318, 323, 407, 414
FatI CATG 3 cut(s) 107, 316, 412
Fnu4HI GCNGC 1 cut(s) 234
FokI GGATG 3 cut(s) 76, 191, 216
Fsp4HI GCNGC 1 cut(s) 234
GlaI GCGC 1 cut(s) 296
GluI GCNGC 1 cut(s) 234
HaeIII GGCC 1 cut(s) 430
HhaI GCGC 1 cut(s) 297
Hin1II CATG 3 cut(s) 111, 320, 416
Hin6I GCGC 1 cut(s) 295
HinP1I GCGC 1 cut(s) 295
HinfI GANTC 1 cut(s) 416
HphI GGTGA 1 cut(s) 344
Hpy166II GTNNAC 2 cut(s) 147, 388
Hpy188I TCNGA 2 cut(s) 174, 421
Hpy188III TCNNGA 1 cut(s) 413
Hpy8I GTNNAC 2 cut(s) 147, 388
HpyAV CCTTC 2 cut(s) 62, 116
HpyCH4III ACNGT 1 cut(s) 144
HpyCH4V TGCA 4 cut(s) 11, 33, 184, 212
HpyF10VI GCNNNNNNNGC 1 cut(s) 294
HpyF3I CTNAG 1 cut(s) 171
Hsp92II CATG 3 cut(s) 111, 320, 416
HspAI GCGC 1 cut(s) 295
Kzo9I GATC 2 cut(s) 245, 334
LpnPI CCDG 9 cut(s) 106, 198, 207, 258, 312, 330, 339, 357, 444
Lsp1109I GCAGC 1 cut(s) 245
MalI GATC 2 cut(s) 247, 336
MbiI CCGCTC 1 cut(s) 302
MboI GATC 2 cut(s) 245, 334
MboII GAAGA 1 cut(s) 113
MflI RGATCY 1 cut(s) 245
MluCI AATT 5 cut(s) 112, 350, 363, 391, 445
MlyI GAGTC 1 cut(s) 425
MnlI CCTC 6 cut(s) 10, 46, 298, 323, 431, 434
MseI TTAA 4 cut(s) 132, 164, 267, 454
MspR9I CCNGG 2 cut(s) 327, 345
MvaI CCWGG 2 cut(s) 327, 345
MwoI GCNNNNNNNGC 1 cut(s) 294
NdeII GATC 2 cut(s) 245, 334
NlaIII CATG 3 cut(s) 111, 320, 416
PagI TCATGA 1 cut(s) 412
PkrI GCNGC 1 cut(s) 235
PleI GAGTC 1 cut(s) 424
PpsI GAGTC 1 cut(s) 424
Psp6I CCWGG 2 cut(s) 325, 343
PspGI CCWGG 2 cut(s) 325, 343
PsuI RGATCY 1 cut(s) 245
RsaI GTAC 1 cut(s) 252
RsaNI GTAC 1 cut(s) 251
SaqAI TTAA 4 cut(s) 132, 164, 267, 454
SatI GCNGC 1 cut(s) 234
Sau3AI GATC 2 cut(s) 245, 334
SchI GAGTC 1 cut(s) 425
ScrFI CCNGG 2 cut(s) 327, 345
SetI ASST 6 cut(s) 21, 57, 127, 267, 309, 334
Sse9I AATT 5 cut(s) 112, 350, 363, 391, 445
SsiI CCGC 2 cut(s) 288, 302
StyD4I CCNGG 2 cut(s) 325, 343
TaaI ACNGT 1 cut(s) 144
TaqI TCGA 2 cut(s) 120, 337
TasI AATT 5 cut(s) 112, 350, 363, 391, 445
TatI WGTACW 1 cut(s) 250
Tru1I TTAA 4 cut(s) 132, 164, 267, 454
Tru9I TTAA 4 cut(s) 132, 164, 267, 454
TscAI CASTG 2 cut(s) 35, 191
TseI GCWGC 1 cut(s) 233
TspDTI ATGAA 2 cut(s) 305, 401
TspRI CASTG 2 cut(s) 35, 191
XapI RAATTY 3 cut(s) 112, 350, 363
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.