pycom15g23330
ERF Family

Major Facilitator Superfamily

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr15
N/A
Physical Location & Seq
Forward (+)
17391981 .. 17393705
1725 bp
Loading structure...
UTR
Exon/CDS
Intron
N/A

Sequence Viewer

Length: 729 bp
ATGTTTAAGGGACTTAAACGCTCATTAATCAGTTTCCCATCATCTTATACTTCGTCTCGGTCGAAATCTGGTTTTTTCAGAAGTTTGCAAGCCATGAGGACGAGAAAGATTTTTGGGATTTCTCTGTCTCTCTTTCTGATCAATTTGGCTGCTATAATGGAGCGTGCTGACGAAAATCTTCTCCCATCTGTTTACAAAGAAGTCAGTGAGGCTTTCAATGCCGGACCATCTGACCTCGGCTATCTGACATTCATTAGGAACTTTATACAGGGATTGGCATCTCCCCTTGCAGGTGTACTTGTTATTAACTATGACCGCCCTTCGGTTCTTGCAATGGGCACTTTTTGCTGGGCCTTGTCAACAGCTGCAGTGGGTGCAAGCCGGATTTTCTCACAAGTTGCATTCTGGAGGGCAGTGAATGGCTTCGGATTGGCAATTGTTATACCAGCACTTCAGTCTTTTATTGCTGATAGTTATAAGGATGGAGTGAGGGGGGCTGGGTTTGGGATGGTAAGCCTCGTTGGTTCCTTGGGCGGCATTGGAGGTGGTGTTCTGGCCACACTTATGGCTGGCGATCAATACTGGAATATACCGGGATGGCGATGTGCTTTCATTCTCATGGCATCACTAAGTTCTCTAATCGGGTTCCTTGTATTTGCTTTTGTGATTGACCCGCGGACGATAGTTTCTGAATTGAGTTCTGATAGATCAGGAAGATTTGAAAATTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0000003 GO:0000323 GO:0002165 GO:0003006 GO:0003376 GO:0003674 GO:0005215 GO:0005319 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005764 GO:0005765 GO:0005768 GO:0005770 GO:0005773 GO:0005774 GO:0006810 GO:0006869 GO:0006897 GO:0006915 GO:0006928 GO:0006950 GO:0006996 GO:0007033 GO:0007034 GO:0007040 GO:0007041 GO:0007154 GO:0007165 GO:0007186 GO:0007275 GO:0007276 GO:0007281 GO:0007292 GO:0007399 GO:0007416 GO:0007417 GO:0007528 GO:0007610 GO:0007617 GO:0007618 GO:0007619 GO:0008150 GO:0008219 GO:0008333 GO:0008347 GO:0008582 GO:0009267 GO:0009605 GO:0009653 GO:0009791 GO:0009886 GO:0009966 GO:0009968 GO:0009987 GO:0009991 GO:0010001 GO:0010008 GO:0010623 GO:0010646 GO:0010648 GO:0010876 GO:0010941 GO:0012501 GO:0012505 GO:0016020 GO:0016043 GO:0016192 GO:0016477 GO:0019098 GO:0019953 GO:0022008 GO:0022412 GO:0022414 GO:0022607 GO:0023051 GO:0023052 GO:0023057 GO:0030154 GO:0031090 GO:0031410 GO:0031667 GO:0031668 GO:0031669 GO:0031902 GO:0031982 GO:0032501 GO:0032502 GO:0032504 GO:0033036 GO:0033554 GO:0035193 GO:0036465 GO:0040007 GO:0040008 GO:0040011 GO:0042063 GO:0042594 GO:0042981 GO:0043067 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043900 GO:0044085 GO:0044087 GO:0044422 GO:0044424 GO:0044433 GO:0044437 GO:0044440 GO:0044444 GO:0044446 GO:0044464 GO:0044703 GO:0045476 GO:0045477 GO:0045595 GO:0045924 GO:0046624 GO:0046907 GO:0048468 GO:0048477 GO:0048488 GO:0048519 GO:0048523 GO:0048583 GO:0048585 GO:0048589 GO:0048609 GO:0048638 GO:0048731 GO:0048856 GO:0048869 GO:0048870 GO:0050789 GO:0050793 GO:0050794 GO:0050803 GO:0050807 GO:0050808 GO:0050896 GO:0051124 GO:0051128 GO:0051179 GO:0051234 GO:0051239 GO:0051641 GO:0051649 GO:0051674 GO:0051704 GO:0051716 GO:0051960 GO:0051963 GO:0060180 GO:0060284 GO:0065007 GO:0065008 GO:0071496 GO:0071702 GO:0071840 GO:0080171 GO:0090092 GO:0090097 GO:0090099 GO:0090101 GO:0090520 GO:0097708 GO:0098588 GO:0098657 GO:0098805 GO:0098852 GO:0099003 GO:0099504 GO:1902742 GO:1904396 GO:1904748 GO:1905879 GO:2000026 GO:2000241
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
MFS_1

Protein Analysis

243

Amino Acids

26.08

Weight (kDa)

9.74

Isoelectric Point (pI)

37.59

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
MFS_1 PF07690 49 - 227 7.8e-24 Major Facilitator Superfamily
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Orthologous Genes

No orthologs found for this gene in the current database.

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 477
AarI CACCTGC 1 cut(s) 281
Acc36I ACCTGC 1 cut(s) 281
AccII CGCG 1 cut(s) 676
AciI CCGC 4 cut(s) 316, 534, 674, 676
AcoI YGGCCR 1 cut(s) 555
AcuI CTGAAG 1 cut(s) 437
AfaI GTAC 1 cut(s) 297
AfiI CCNNNNNNNGG 2 cut(s) 290, 322
AgsI TTSAA 2 cut(s) 217, 722
AloI GAACNNNNNNTCC 2 cut(s) 534, 566
AluBI AGCT 1 cut(s) 365
AluI AGCT 1 cut(s) 365
Alw26I GTCTC 2 cut(s) 60, 132
AoxI GGCC 2 cut(s) 351, 555
ApeKI GCWGC 2 cut(s) 149, 365
AseI ATTAAT 1 cut(s) 26
Asp700I GAANNNNTTC 2 cut(s) 177, 422
AspS9I GGNCC 2 cut(s) 224, 351
AsuC2I CCSGG 1 cut(s) 594
AvaII GGWCC 1 cut(s) 224
BaeGI GKGCMC 1 cut(s) 341
BalI TGGCCA 1 cut(s) 557
BbvI GCAGC 2 cut(s) 136, 352
BccI CCATC 6 cut(s) 46, 193, 235, 476, 502, 591
BclI TGATCA 1 cut(s) 138
BcnI CCSGG 1 cut(s) 594
BcoDI GTCTC 2 cut(s) 60, 132
BfmI CTRYAG 1 cut(s) 366
BfuAI ACCTGC 1 cut(s) 281
BisI GCNGC 3 cut(s) 150, 366, 535
BlsI GCNGC 3 cut(s) 151, 367, 536
Bme1390I CCNGG 1 cut(s) 594
Bme18I GGWCC 1 cut(s) 224
BmgT120I GGNCC 2 cut(s) 224, 351
BmiI GGNNCC 2 cut(s) 526, 647
BmrFI CCNGG 1 cut(s) 594
BmsI GCATC 2 cut(s) 287, 632
BpmI CTGGAG 1 cut(s) 427
BpuMI CCSGG 1 cut(s) 594
BsaBI GATNNNNATC 1 cut(s) 277
BsaJI CCNNGG 3 cut(s) 235, 528, 674
BsaXI ACNNNNNCTCC 2 cut(s) 534, 564
Bsc4I CCNNNNNNNGG 2 cut(s) 290, 322
Bse1I ACTGG 1 cut(s) 587
Bse3DI GCAATG 1 cut(s) 339
Bse8I GATNNNNATC 1 cut(s) 277
BseDI CCNNGG 3 cut(s) 235, 528, 674
BseGI GGATG 3 cut(s) 487, 513, 602
BseJI GATNNNNATC 1 cut(s) 277
BseLI CCNNNNNNNGG 2 cut(s) 290, 322
BseMI GCAATG 1 cut(s) 339
BseNI ACTGG 1 cut(s) 587
BseSI GKGCMC 1 cut(s) 341
BseXI GCAGC 2 cut(s) 136, 352
BseYI CCCAGC 2 cut(s) 348, 497
Bsh1236I CGCG 1 cut(s) 676
Bsh1285I CGRYCG 1 cut(s) 62
BshFI GGCC 2 cut(s) 353, 557
BsiEI CGRYCG 1 cut(s) 62
BsiSI CCGG 3 cut(s) 222, 382, 593
BslFI GGGAC 1 cut(s) 24
BslI CCNNNNNNNGG 2 cut(s) 290, 322
BsmAI GTCTC 2 cut(s) 60, 132
BsmBI CGTCTC 1 cut(s) 60
BsmFI GGGAC 1 cut(s) 24
BsmI GAATGC 1 cut(s) 401
BsnI GGCC 2 cut(s) 353, 557
Bsp1286I GDGCHC 1 cut(s) 341
Bsp143I GATC 3 cut(s) 138, 574, 707
BspACI CCGC 4 cut(s) 316, 534, 674, 676
BspANI GGCC 2 cut(s) 353, 557
BspFNI CGCG 1 cut(s) 676
BspLI GGNNCC 2 cut(s) 526, 647
BspMAI CTGCAG 1 cut(s) 370
BspMI ACCTGC 1 cut(s) 281
BsrDI GCAATG 1 cut(s) 339
BsrI ACTGG 1 cut(s) 587
BssECI CCNNGG 3 cut(s) 235, 528, 674
BssMI GATC 3 cut(s) 138, 574, 707
BssT1I CCWWGG 1 cut(s) 528
BstAPI GCANNNNNTGC 2 cut(s) 345, 374
BstC8I GCNNGC 4 cut(s) 90, 165, 379, 571
BstDEI CTNAG 1 cut(s) 629
BstDSI CCRYGG 1 cut(s) 674
BstF5I GGATG 3 cut(s) 487, 513, 602
BstFNI CGCG 1 cut(s) 676
BstKTI GATC 3 cut(s) 141, 577, 710
BstMAI GTCTC 2 cut(s) 60, 132
BstMBI GATC 3 cut(s) 138, 574, 707
BstMCI CGRYCG 1 cut(s) 62
BstMWI GCNNNNNNNGC 3 cut(s) 218, 345, 374
BstSCI CCNGG 1 cut(s) 592
BstSFI CTRYAG 1 cut(s) 366
BstSLI GKGCMC 1 cut(s) 341
BstUI CGCG 1 cut(s) 676
BstV1I GCAGC 2 cut(s) 136, 352
BstXI CCANNNNNNTGG 1 cut(s) 565
BsuRI GGCC 2 cut(s) 353, 557
BtgI CCRYGG 1 cut(s) 674
BtgZI GCGATG 1 cut(s) 616
BtsCI GGATG 3 cut(s) 487, 513, 602
BtsI GCAGTG 2 cut(s) 375, 420
BtsIMutI CAGTG 3 cut(s) 211, 375, 420
BveI ACCTGC 1 cut(s) 281
Cac8I GCNNGC 4 cut(s) 90, 165, 379, 571
Cfr13I GGNCC 2 cut(s) 224, 351
Cfr42I CCGCGG 1 cut(s) 677
Csp6I GTAC 1 cut(s) 296
CviAII CATG 2 cut(s) 94, 619
CviQI GTAC 1 cut(s) 296
DdeI CTNAG 1 cut(s) 629
DpnI GATC 3 cut(s) 140, 576, 709
DpnII GATC 3 cut(s) 138, 574, 707
EaeI YGGCCR 1 cut(s) 555
Eco130I CCWWGG 1 cut(s) 528
Eco47I GGWCC 1 cut(s) 224
Eco57I CTGAAG 1 cut(s) 437
EcoT14I CCWWGG 1 cut(s) 528
ErhI CCWWGG 1 cut(s) 528
Esp3I CGTCTC 1 cut(s) 60
FaeI CATG 2 cut(s) 97, 622
FaqI GGGAC 1 cut(s) 24
FatI CATG 2 cut(s) 93, 618
FauI CCCGC 1 cut(s) 681
FbaI TGATCA 1 cut(s) 138
Fnu4HI GCNGC 3 cut(s) 150, 366, 535
FokI GGATG 3 cut(s) 494, 520, 609
Fsp4HI GCNGC 3 cut(s) 150, 366, 535
GluI GCNGC 3 cut(s) 150, 366, 535
GsaI CCCAGC 2 cut(s) 352, 501
GsuI CTGGAG 1 cut(s) 427
HaeIII GGCC 2 cut(s) 353, 557
HapII CCGG 3 cut(s) 222, 382, 593
Hin1II CATG 2 cut(s) 97, 622
HincII GTYRAC 1 cut(s) 360
HindII GTYRAC 1 cut(s) 360
HpaII CCGG 3 cut(s) 222, 382, 593
Hpy166II GTNNAC 3 cut(s) 193, 296, 360
Hpy188I TCNGA 7 cut(s) 80, 138, 232, 246, 428, 691, 703
Hpy188III TCNNGA 2 cut(s) 406, 711
Hpy8I GTNNAC 3 cut(s) 193, 296, 360
HpyAV CCTTC 1 cut(s) 330
HpyCH4V TGCA 6 cut(s) 88, 290, 332, 368, 377, 401
HpyF10VI GCNNNNNNNGC 3 cut(s) 218, 345, 374
HpyF3I CTNAG 1 cut(s) 629
Hsp92II CATG 2 cut(s) 97, 622
Ksp22I TGATCA 1 cut(s) 138
KspI CCGCGG 1 cut(s) 677
Kzo9I GATC 3 cut(s) 138, 574, 707
LmnI GCTCC 1 cut(s) 160
Lsp1109I GCAGC 2 cut(s) 136, 352
LweI GCATC 2 cut(s) 287, 632
MalI GATC 3 cut(s) 140, 576, 709
MboI GATC 3 cut(s) 138, 574, 707
MboII GAAGA 2 cut(s) 170, 726
MfeI CAATTG 1 cut(s) 435
MhlI GDGCHC 1 cut(s) 341
MlsI TGGCCA 1 cut(s) 557
MluCI AATT 4 cut(s) 142, 435, 692, 724
MluNI TGGCCA 1 cut(s) 557
MnlI CCTC 7 cut(s) 90, 202, 245, 402, 483, 527, 536
Mox20I TGGCCA 1 cut(s) 557
MroXI GAANNNNTTC 2 cut(s) 177, 422
MscI TGGCCA 1 cut(s) 557
MseI TTAA 5 cut(s) 6, 15, 26, 306, 727
MslI CAYNNNNRTG 2 cut(s) 563, 617
Msp20I TGGCCA 1 cut(s) 557
MspA1I CMGCKG 2 cut(s) 365, 676
MspI CCGG 3 cut(s) 222, 382, 593
MspR9I CCNGG 1 cut(s) 594
MunI CAATTG 1 cut(s) 435
Mva1269I GAATGC 1 cut(s) 401
MvnI CGCG 1 cut(s) 676
MwoI GCNNNNNNNGC 3 cut(s) 218, 345, 374
NciI CCSGG 1 cut(s) 594
NdeII GATC 3 cut(s) 138, 574, 707
NlaIII CATG 2 cut(s) 97, 622
NlaIV GGNNCC 2 cut(s) 526, 647
NmeAIII GCCGAG 1 cut(s) 216
PaqCI CACCTGC 1 cut(s) 281
PcsI WCGNNNNNNNCGW 1 cut(s) 59
PctI GAATGC 1 cut(s) 401
PdmI GAANNNNTTC 2 cut(s) 177, 422
PkrI GCNGC 3 cut(s) 151, 367, 536
PshBI ATTAAT 1 cut(s) 26
PsiI TTATAA 1 cut(s) 477
PspFI CCCAGC 2 cut(s) 348, 497
PspN4I GGNNCC 2 cut(s) 526, 647
PspPI GGNCC 2 cut(s) 224, 351
PstI CTGCAG 1 cut(s) 370
PvuII CAGCTG 1 cut(s) 365
RsaI GTAC 1 cut(s) 297
RsaNI GTAC 1 cut(s) 296
RseI CAYNNNNRTG 2 cut(s) 563, 617
SacII CCGCGG 1 cut(s) 677
SaqAI TTAA 5 cut(s) 6, 15, 26, 306, 727
SatI GCNGC 3 cut(s) 150, 366, 535
Sau3AI GATC 3 cut(s) 138, 574, 707
Sau96I GGNCC 2 cut(s) 224, 351
ScrFI CCNGG 1 cut(s) 594
SduI GDGCHC 1 cut(s) 341
SetI ASST 4 cut(s) 237, 295, 367, 547
SfaNI GCATC 2 cut(s) 287, 632
SfcI CTRYAG 1 cut(s) 366
Sfr303I CCGCGG 1 cut(s) 677
SgrBI CCGCGG 1 cut(s) 677
SinI GGWCC 1 cut(s) 224
SmiMI CAYNNNNRTG 2 cut(s) 563, 617
Sse9I AATT 4 cut(s) 142, 435, 692, 724
SsiI CCGC 4 cut(s) 316, 534, 674, 676
StyD4I CCNGG 1 cut(s) 592
StyI CCWWGG 1 cut(s) 528
TaqI TCGA 1 cut(s) 62
TaqII GACCGA 1 cut(s) 48
TasI AATT 4 cut(s) 142, 435, 692, 724
TatI WGTACW 1 cut(s) 295
TauI GCSGC 1 cut(s) 537
Tru1I TTAA 5 cut(s) 6, 15, 26, 306, 727
Tru9I TTAA 5 cut(s) 6, 15, 26, 306, 727
TscAI CASTG 3 cut(s) 211, 375, 420
TseI GCWGC 2 cut(s) 149, 365
TspDTI ATGAA 2 cut(s) 241, 601
TspRI CASTG 3 cut(s) 211, 375, 420
VpaK11BI GGWCC 1 cut(s) 224
VspI ATTAAT 1 cut(s) 26
XmnI GAANNNNTTC 2 cut(s) 177, 422
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.