pycom15g29150

No description available

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr15
N/A
Physical Location & Seq
Reverse (-)
25823110 .. 25825683
2574 bp
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UTR
Exon/CDS
Intron
N/A

Sequence Viewer

Length: 375 bp
ATGTTTCCAGGAGAGCAAAAGTCGGTTAACTGTGAATTTGATTGGGAATTGGATGAACTGGAGGAGTTCACTGATAAACTGATAGAAGAGGAGGAATTATCTGCAGACCAGAAGGATGAATTCAAGGAGTTTGTCAAGGAGAAAGTCCATGAACAAAAGAAATCTAATCGAGAGGCCAAGGAAACCCGGAGAAAAGCCATTGAAGAAATGAGTGAAGAAGCTAAAACAGCATTTGAAAATATGAGGTTTTACAAGTTCTACCCTGTACATACACCAGATACTCCTGACATTTCAATTGTTAAGACCATTGCAAAAGTAAAAACAAAGGAGAGGAAAGCTCGTATTGCCTTTTTGTTGGTGGGTTGTAGGGATTAA

Protein Analysis

125

Amino Acids

14.76

Weight (kDa)

5.17

Isoelectric Point (pI)

44.77

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Orthologous Genes

No orthologs found for this gene in the current database.

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AcsI RAATTY 2 cut(s) 35, 119
AfaI GTAC 1 cut(s) 267
AgsI TTSAA 4 cut(s) 124, 203, 236, 294
AjnI CCWGG 1 cut(s) 7
AluBI AGCT 2 cut(s) 221, 338
AluI AGCT 2 cut(s) 221, 338
AoxI GGCC 1 cut(s) 174
ApoI RAATTY 2 cut(s) 35, 119
AsuC2I CCSGG 1 cut(s) 187
BciT130I CCWGG 1 cut(s) 9
BcnI CCSGG 1 cut(s) 187
BfmI CTRYAG 1 cut(s) 102
Bme1390I CCNGG 2 cut(s) 9, 187
BmrFI CCNGG 2 cut(s) 9, 187
BplI GAGNNNNNCTC 2 cut(s) 322, 354
BpmI CTGGAG 1 cut(s) 80
BpuMI CCSGG 1 cut(s) 187
BsaJI CCNNGG 1 cut(s) 177
Bse1I ACTGG 1 cut(s) 63
Bse3DI GCAATG 1 cut(s) 306
BseBI CCWGG 1 cut(s) 9
BseDI CCNNGG 1 cut(s) 177
BseGI GGATG 2 cut(s) 58, 121
BseMI GCAATG 1 cut(s) 306
BseNI ACTGG 1 cut(s) 63
BseRI GAGGAG 2 cut(s) 77, 104
BshFI GGCC 1 cut(s) 176
BsiSI CCGG 1 cut(s) 187
BsnI GGCC 1 cut(s) 176
Bsp1407I TGTACA 1 cut(s) 265
BspANI GGCC 1 cut(s) 176
BspMAI CTGCAG 1 cut(s) 106
BsrDI GCAATG 1 cut(s) 306
BsrGI TGTACA 1 cut(s) 265
BsrI ACTGG 1 cut(s) 63
BssECI CCNNGG 1 cut(s) 177
BssT1I CCWWGG 1 cut(s) 177
Bst2UI CCWGG 1 cut(s) 9
Bst4CI ACNGT 1 cut(s) 32
Bst6I CTCTTC 1 cut(s) 81
BstAUI TGTACA 1 cut(s) 265
BstF5I GGATG 2 cut(s) 58, 121
BstMWI GCNNNNNNNGC 2 cut(s) 227, 344
BstNI CCWGG 1 cut(s) 9
BstSCI CCNGG 2 cut(s) 7, 185
BstSFI CTRYAG 1 cut(s) 102
BsuRI GGCC 1 cut(s) 176
BtsCI GGATG 2 cut(s) 58, 121
BtsIMutI CAGTG 1 cut(s) 69
Csp6I GTAC 1 cut(s) 266
CviAII CATG 1 cut(s) 149
CviJI RGCY 4 cut(s) 176, 197, 221, 338
CviKI_1 RGCY 4 cut(s) 176, 197, 221, 338
CviQI GTAC 1 cut(s) 266
Eam1104I CTCTTC 1 cut(s) 81
EarI CTCTTC 1 cut(s) 81
Eco130I CCWWGG 1 cut(s) 177
EcoRI GAATTC 1 cut(s) 119
EcoRII CCWGG 1 cut(s) 7
EcoT14I CCWWGG 1 cut(s) 177
ErhI CCWWGG 1 cut(s) 177
FaeI CATG 1 cut(s) 152
FaiI YATR 3 cut(s) 150, 242, 270
FatI CATG 1 cut(s) 148
FokI GGATG 2 cut(s) 65, 128
GsuI CTGGAG 1 cut(s) 80
HaeIII GGCC 1 cut(s) 176
HapII CCGG 1 cut(s) 187
Hin1II CATG 1 cut(s) 152
HincII GTYRAC 1 cut(s) 28
HindII GTYRAC 1 cut(s) 28
HpaI GTTAAC 1 cut(s) 28
HpaII CCGG 1 cut(s) 187
Hpy166II GTNNAC 2 cut(s) 28, 69
Hpy188III TCNNGA 2 cut(s) 170, 284
Hpy8I GTNNAC 2 cut(s) 28, 69
HpyAV CCTTC 1 cut(s) 106
HpyCH4III ACNGT 1 cut(s) 32
HpyCH4V TGCA 2 cut(s) 104, 311
HpyF10VI GCNNNNNNNGC 2 cut(s) 227, 344
Hsp92II CATG 1 cut(s) 152
KspAI GTTAAC 1 cut(s) 28
LpnPI CCDG 7 cut(s) 21, 44, 122, 200, 276, 288, 297
MboII GAAGA 3 cut(s) 98, 215, 227
MfeI CAATTG 1 cut(s) 294
MluCI AATT 5 cut(s) 35, 47, 95, 119, 294
MnlI CCTC 6 cut(s) 55, 82, 85, 166, 237, 324
MseI TTAA 3 cut(s) 27, 300, 373
MspI CCGG 1 cut(s) 187
MspR9I CCNGG 2 cut(s) 9, 187
MunI CAATTG 1 cut(s) 294
MvaI CCWGG 1 cut(s) 9
MwoI GCNNNNNNNGC 2 cut(s) 227, 344
NciI CCSGG 1 cut(s) 187
NlaIII CATG 1 cut(s) 152
PfoI TCCNGGA 1 cut(s) 7
Psp6I CCWGG 1 cut(s) 7
PspGI CCWGG 1 cut(s) 7
PstI CTGCAG 1 cut(s) 106
RsaI GTAC 1 cut(s) 267
RsaNI GTAC 1 cut(s) 266
SaqAI TTAA 3 cut(s) 27, 300, 373
ScrFI CCNGG 2 cut(s) 9, 187
SetI ASST 3 cut(s) 223, 248, 340
SfcI CTRYAG 1 cut(s) 102
Sse9I AATT 5 cut(s) 35, 47, 95, 119, 294
StyD4I CCNGG 2 cut(s) 7, 185
StyI CCWWGG 1 cut(s) 177
TaaI ACNGT 1 cut(s) 32
TaqI TCGA 1 cut(s) 169
TasI AATT 5 cut(s) 35, 47, 95, 119, 294
TatI WGTACW 1 cut(s) 265
Tru1I TTAA 3 cut(s) 27, 300, 373
Tru9I TTAA 3 cut(s) 27, 300, 373
TscAI CASTG 1 cut(s) 76
TspDTI ATGAA 3 cut(s) 69, 132, 165
TspRI CASTG 1 cut(s) 76
XapI RAATTY 2 cut(s) 35, 119
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.