pycom15g30680

Amino acid permease

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr15
N/A
Physical Location & Seq
Reverse (-)
28522884 .. 28524655
1772 bp
Loading structure...
UTR
Exon/CDS
Intron
N/A

Sequence Viewer

Length: 1173 bp
ATGGGAGACAACACTGCCACGAAAAACCAGCAGCTCCACCACCACCAAGTTTTTGATTTCTCAGTTGATATGCCTCCACAAGGAGGCTCCAAGTGCTTTGATGATGACGGCCGTCTCAAACGAACCGGCACTGTTTGGACTTCAAGTGCACACATAATTACTGCTGTGATTGGTTCTGGGGTTCTGTCCTTGGCTTGGGCCACAGCTCAGCTTGGATGGGTTGCTGGCCCTTCTGTGATGCTCTTGTTCTCTTTTGTGACCTACTACACTTCAACTCTCCTCTCTGCATGCTATCGTTCCGGTGATTCGATCACTGGGAAGAGAAACTATACGTACATGGATGCTGTTAGATCCAACCTTGGTGGAGCTAAGGTTAAAATTTGTGGATATGTTCAGTACTTGAATCTTTTTGGAGTTTCCATTGGCTACACAATTGCATCATCCATAAGCATGATGGCAATAAAGAGGTCTAATTGCTTCCACAAGAGTGGTGGAAAAAATCCATGCCGTATTAACAGCAACCCTTATATGATCGATCTCGGCGTCACAGAGATCATATTTTCTCAGATTCCGGACATCGATCAGTTGTGGTGGCTCTCCATTGTTGCTGCAGTCATGTCTTTCACTTACTCAACCATTGGACTCGGCCTTGGAATTGTTCAAGTTGCAGAAAATGGAAAAATCATGGGAAGTATGACCGGAATAAGCATCGGGACAGTGACTGCAACCCAAAAGATGTGGAGGAGCTTCCAAGCACTTGGTGACATAGCTTTCGCCTACTCGTACTCTCTCATCCTAATCGAAATTCAGGACACAATTAGATCCCCACCATCTGAATCCAAGACAATGAAAAAGGCCACTCGATCAGTGTGGCAGTCACAACCCTTTTCTACATGCTCTGTGGCTGCATGGGATACGCTGCTTTCGGAGACTTATCCCCCGGAAACCTCCTCACTGGCTTTGGTTTCTACAACCCCTATTGGCTCCTTGACATTGCCAACGCTGCCATTGTCATCCACCTTGTTGGTGCATACCAAGTCTACGCACAGCCCCTTTTCGCCTTTGTTGAGAAAACCGCAGCGCAAAAGTTCCCGGACAGCGAATTTATCACGAAAGACATCAAACTCCGAATCCCAGGAATCGGACCCTACAACCTCAATCTCTTCAGAATGA

Protein Analysis

391

Amino Acids

42.35

Weight (kDa)

9.12

Isoelectric Point (pI)

45.36

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Aa_trans PF01490 41 - 287 2.2e-66 Transmembrane amino acid transporter protein
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

Orthologous Genes

No orthologs found for this gene in the current database.

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccI GTMKAC 1 cut(s) 1040
AccIII TCCGGA 1 cut(s) 571
AciI CCGC 1 cut(s) 1076
AclWI GGATC 2 cut(s) 345, 816
AcoI YGGCCR 1 cut(s) 109
AcsI RAATTY 3 cut(s) 378, 804, 1102
AcuI CTGAAG 1 cut(s) 1149
AcyI GRCGYC 1 cut(s) 543
AdeI CACNNNGTG 1 cut(s) 761
AfaI GTAC 3 cut(s) 335, 398, 785
AfiI CCNNNNNNNGG 4 cut(s) 80, 83, 195, 1141
AgsI TTSAA 4 cut(s) 144, 273, 403, 662
AjnI CCWGG 1 cut(s) 1134
AleI CACNNNNGTG 1 cut(s) 486
AluBI AGCT 6 cut(s) 34, 206, 211, 368, 747, 770
AluI AGCT 6 cut(s) 34, 206, 211, 368, 747, 770
Alw21I GWGCWC 1 cut(s) 151
Alw26I GTCTC 2 cut(s) 119, 923
Alw44I GTGCAC 1 cut(s) 147
AlwI GGATC 2 cut(s) 345, 816
AlwNI CAGNNNCTG 1 cut(s) 722
Aor13HI TCCGGA 1 cut(s) 571
AoxI GGCC 5 cut(s) 109, 198, 226, 646, 855
ApaLI GTGCAC 1 cut(s) 147
ApeKI GCWGC 6 cut(s) 31, 608, 905, 919, 1003, 1078
ApoI RAATTY 3 cut(s) 378, 804, 1102
ArsI GACNNNNNNTTYG 2 cut(s) 755, 787
AspLEI GCGC 1 cut(s) 1083
AspS9I GGNCC 3 cut(s) 198, 227, 1144
AsuC2I CCSGG 2 cut(s) 941, 1093
AsuHPI GGTGA 2 cut(s) 314, 773
AvaII GGWCC 1 cut(s) 1144
BaeGI GKGCMC 1 cut(s) 151
Bbv12I GWGCWC 1 cut(s) 151
BbvI GCAGC 6 cut(s) 43, 595, 892, 906, 990, 1090
BccI CCATC 3 cut(s) 210, 448, 838
BceAI ACGGC 3 cut(s) 96, 124, 492
BciT130I CCWGG 1 cut(s) 1136
BciVI GTATCC 1 cut(s) 907
BcnI CCSGG 2 cut(s) 941, 1093
BcoDI GTCTC 2 cut(s) 119, 923
BfmI CTRYAG 1 cut(s) 609
BfuI GTATCC 1 cut(s) 907
BisI GCNGC 6 cut(s) 32, 609, 906, 920, 1004, 1079
BlpI GCTNAGC 1 cut(s) 207
BlsI GCNGC 6 cut(s) 33, 610, 907, 921, 1005, 1080
BmcAI AGTACT 1 cut(s) 398
Bme1390I CCNGG 3 cut(s) 941, 1093, 1136
Bme18I GGWCC 1 cut(s) 1144
BmgT120I GGNCC 3 cut(s) 198, 227, 1144
BmiI GGNNCC 3 cut(s) 88, 985, 1146
BmrFI CCNGG 3 cut(s) 941, 1093, 1136
BmrI ACTGGG 1 cut(s) 324
BmsI GCATC 4 cut(s) 228, 331, 446, 717
BmuI ACTGGG 1 cut(s) 324
BoxI GACNNNNGTC 1 cut(s) 111
Bpu10I CCTNAGC 1 cut(s) 369
Bpu1102I GCTNAGC 1 cut(s) 207
BpuMI CCSGG 2 cut(s) 941, 1093
Bsa29I ATCGAT 2 cut(s) 534, 579
BsaAI YACGTR 1 cut(s) 333
BsaHI GRCGYC 1 cut(s) 543
BsaJI CCNNGG 5 cut(s) 189, 358, 649, 939, 1134
BsaWI WCCGGW 3 cut(s) 299, 571, 698
BsaXI ACNNNNNCTCC 2 cut(s) 357, 387
Bsc4I CCNNNNNNNGG 4 cut(s) 80, 83, 195, 1141
Bse118I RCCGGY 1 cut(s) 125
Bse1I ACTGG 2 cut(s) 319, 960
Bse3DI GCAATG 1 cut(s) 992
BseAI TCCGGA 1 cut(s) 571
BseBI CCWGG 1 cut(s) 1136
BseCI ATCGAT 2 cut(s) 534, 579
BseDI CCNNGG 5 cut(s) 189, 358, 649, 939, 1134
BseGI GGATG 5 cut(s) 221, 346, 440, 792, 1013
BseLI CCNNNNNNNGG 4 cut(s) 80, 83, 195, 1141
BseMI GCAATG 1 cut(s) 992
BseMII CTCAG 3 cut(s) 75, 221, 578
BseNI ACTGG 2 cut(s) 319, 960
BseRI GAGGAG 3 cut(s) 269, 757, 940
BseSI GKGCMC 1 cut(s) 151
BseX3I CGGCCG 1 cut(s) 109
BseXI GCAGC 6 cut(s) 43, 595, 892, 906, 990, 1090
Bsh1285I CGRYCG 1 cut(s) 112
BshFI GGCC 5 cut(s) 111, 200, 228, 648, 857
BshVI ATCGAT 2 cut(s) 534, 579
BsiEI CGRYCG 1 cut(s) 112
BsiHKAI GWGCWC 1 cut(s) 151
BsiSI CCGG 6 cut(s) 126, 300, 572, 699, 941, 1093
BslFI GGGAC 1 cut(s) 727
BslI CCNNNNNNNGG 4 cut(s) 80, 83, 195, 1141
BsmAI GTCTC 2 cut(s) 119, 923
BsmBI CGTCTC 1 cut(s) 119
BsmFI GGGAC 1 cut(s) 727
BsnI GGCC 5 cut(s) 111, 200, 228, 648, 857
Bsp1286I GDGCHC 1 cut(s) 151
Bsp13I TCCGGA 1 cut(s) 571
Bsp143I GATC 8 cut(s) 309, 350, 531, 535, 552, 580, 821, 863
Bsp1720I GCTNAGC 1 cut(s) 207
BspACI CCGC 1 cut(s) 1076
BspANI GGCC 5 cut(s) 111, 200, 228, 648, 857
BspCNI CTCAG 3 cut(s) 74, 220, 577
BspDI ATCGAT 2 cut(s) 534, 579
BspEI TCCGGA 1 cut(s) 571
BspLI GGNNCC 3 cut(s) 88, 985, 1146
BspMAI CTGCAG 1 cut(s) 613
BspPI GGATC 2 cut(s) 345, 816
BsrDI GCAATG 1 cut(s) 992
BsrFI RCCGGY 1 cut(s) 125
BsrI ACTGG 2 cut(s) 319, 960
BssAI RCCGGY 1 cut(s) 125
BssECI CCNNGG 5 cut(s) 189, 358, 649, 939, 1134
BssMI GATC 8 cut(s) 309, 350, 531, 535, 552, 580, 821, 863
BssNI GRCGYC 1 cut(s) 543
BssT1I CCWWGG 3 cut(s) 189, 358, 649
Bst2UI CCWGG 1 cut(s) 1136
Bst4CI ACNGT 2 cut(s) 133, 718
Bst6I CTCTTC 2 cut(s) 314, 1168
BstACI GRCGYC 1 cut(s) 543
BstBAI YACGTR 1 cut(s) 333
BstC8I GCNNGC 2 cut(s) 226, 289
BstDEI CTNAG 4 cut(s) 61, 207, 369, 564
BstENI CCTNNNNNAGG 1 cut(s) 78
BstF5I GGATG 5 cut(s) 221, 346, 440, 792, 1013
BstHHI GCGC 1 cut(s) 1083
BstKTI GATC 8 cut(s) 312, 353, 534, 538, 555, 583, 824, 866
BstMAI GTCTC 2 cut(s) 119, 923
BstMBI GATC 8 cut(s) 309, 350, 531, 535, 552, 580, 821, 863
BstMCI CGRYCG 1 cut(s) 112
BstMWI GCNNNNNNNGC 2 cut(s) 93, 1003
BstNI CCWGG 1 cut(s) 1136
BstNSI RCATGY 2 cut(s) 291, 897
BstPAI GACNNNNGTC 1 cut(s) 111
BstSCI CCNGG 3 cut(s) 939, 1091, 1134
BstSFI CTRYAG 1 cut(s) 609
BstSLI GKGCMC 1 cut(s) 151
BstSNI TACGTA 1 cut(s) 333
BstV1I GCAGC 6 cut(s) 43, 595, 892, 906, 990, 1090
BstX2I RGATCY 2 cut(s) 350, 821
BstXI CCANNNNNNTGG 3 cut(s) 488, 758, 1024
BstYI RGATCY 2 cut(s) 350, 821
BstZI CGGCCG 1 cut(s) 109
Bsu15I ATCGAT 2 cut(s) 534, 579
BsuI GTATCC 1 cut(s) 907
BsuRI GGCC 5 cut(s) 111, 200, 228, 648, 857
BsuTUI ATCGAT 2 cut(s) 534, 579
BtsCI GGATG 5 cut(s) 221, 346, 440, 792, 1013
BtsI GCAGTG 1 cut(s) 12
BtsIMutI CAGTG 6 cut(s) 12, 129, 312, 723, 873, 953
Cac8I GCNNGC 2 cut(s) 226, 289
CaiI CAGNNNCTG 1 cut(s) 722
CfoI GCGC 1 cut(s) 1083
Cfr10I RCCGGY 1 cut(s) 125
Cfr13I GGNCC 3 cut(s) 198, 227, 1144
ClaI ATCGAT 2 cut(s) 534, 579
CseI GACGC 1 cut(s) 532
Csp6I GTAC 3 cut(s) 334, 397, 784
CspCI CAANNNNNGTGG 6 cut(s) 343, 378, 472, 507, 719, 754
CviAII CATG 8 cut(s) 288, 337, 451, 504, 616, 685, 894, 909
CviQI GTAC 3 cut(s) 334, 397, 784
DdeI CTNAG 4 cut(s) 61, 207, 369, 564
DpnI GATC 8 cut(s) 311, 352, 533, 537, 554, 582, 823, 865
DpnII GATC 8 cut(s) 309, 350, 531, 535, 552, 580, 821, 863
DraIII CACNNNGTG 1 cut(s) 761
EaeI YGGCCR 1 cut(s) 109
EagI CGGCCG 1 cut(s) 109
Eam1104I CTCTTC 2 cut(s) 314, 1168
EarI CTCTTC 2 cut(s) 314, 1168
EclXI CGGCCG 1 cut(s) 109
Eco105I TACGTA 1 cut(s) 333
Eco130I CCWWGG 3 cut(s) 189, 358, 649
Eco47I GGWCC 1 cut(s) 1144
Eco52I CGGCCG 1 cut(s) 109
Eco57I CTGAAG 1 cut(s) 1149
EcoNI CCTNNNNNAGG 1 cut(s) 78
EcoRII CCWGG 1 cut(s) 1134
EcoT14I CCWWGG 3 cut(s) 189, 358, 649
ErhI CCWWGG 3 cut(s) 189, 358, 649
Esp3I CGTCTC 1 cut(s) 119
FaeI CATG 8 cut(s) 291, 340, 454, 507, 619, 688, 897, 912
FaqI GGGAC 1 cut(s) 727
FatI CATG 8 cut(s) 287, 336, 450, 503, 615, 684, 893, 908
FblI GTMKAC 1 cut(s) 1040
Fnu4HI GCNGC 6 cut(s) 32, 609, 906, 920, 1004, 1079
FokI GGATG 5 cut(s) 228, 353, 427, 779, 1000
Fsp4HI GCNGC 6 cut(s) 32, 609, 906, 920, 1004, 1079
GlaI GCGC 1 cut(s) 1082
GluI GCNGC 6 cut(s) 32, 609, 906, 920, 1004, 1079
HaeIII GGCC 5 cut(s) 111, 200, 228, 648, 857
HapII CCGG 6 cut(s) 126, 300, 572, 699, 941, 1093
HgaI GACGC 1 cut(s) 532
HhaI GCGC 1 cut(s) 1083
Hin1I GRCGYC 1 cut(s) 543
Hin1II CATG 8 cut(s) 291, 340, 454, 507, 619, 688, 897, 912
Hin6I GCGC 1 cut(s) 1081
HinP1I GCGC 1 cut(s) 1081
HinfI GANTC 7 cut(s) 305, 403, 568, 642, 836, 1130, 1139
HpaII CCGG 6 cut(s) 126, 300, 572, 699, 941, 1093
HphI GGTGA 2 cut(s) 314, 773
Hpy166II GTNNAC 2 cut(s) 149, 1041
Hpy188I TCNGA 6 cut(s) 567, 835, 928, 1129, 1144, 1168
Hpy188III TCNNGA 4 cut(s) 572, 712, 809, 1110
Hpy8I GTNNAC 2 cut(s) 149, 1041
HpyAV CCTTC 1 cut(s) 240
HpyCH4III ACNGT 2 cut(s) 133, 718
HpyCH4IV ACGT 1 cut(s) 332
HpyCH4V TGCA 8 cut(s) 149, 287, 437, 611, 668, 725, 908, 1030
HpyF10VI GCNNNNNNNGC 2 cut(s) 93, 1003
HpyF3I CTNAG 4 cut(s) 61, 207, 369, 564
HpySE526I ACGT 1 cut(s) 332
Hsp92I GRCGYC 1 cut(s) 543
Hsp92II CATG 8 cut(s) 291, 340, 454, 507, 619, 688, 897, 912
HspAI GCGC 1 cut(s) 1081
Kpn2I TCCGGA 1 cut(s) 571
Kzo9I GATC 8 cut(s) 309, 350, 531, 535, 552, 580, 821, 863
LmnI GCTCC 5 cut(s) 39, 92, 365, 744, 989
Lsp1109I GCAGC 6 cut(s) 43, 595, 892, 906, 990, 1090
LweI GCATC 4 cut(s) 228, 331, 446, 717
MaeII ACGT 1 cut(s) 332
MaeIII GTNAC 5 cut(s) 256, 544, 718, 761, 876
MalI GATC 8 cut(s) 311, 352, 533, 537, 554, 582, 823, 865
MboI GATC 8 cut(s) 309, 350, 531, 535, 552, 580, 821, 863
MboII GAAGA 2 cut(s) 331, 1155
MfeI CAATTG 1 cut(s) 432
MflI RGATCY 2 cut(s) 350, 821
MhlI GDGCHC 1 cut(s) 151
MluCI AATT 8 cut(s) 156, 378, 432, 472, 654, 804, 816, 1102
MlyI GAGTC 1 cut(s) 636
MmeI TCCRAC 1 cut(s) 378
MnlI CCTC 8 cut(s) 77, 84, 290, 459, 735, 958, 961, 1165
MroI TCCGGA 1 cut(s) 571
MseI TTAA 2 cut(s) 375, 513
MslI CAYNNNNRTG 2 cut(s) 449, 486
MspI CCGG 6 cut(s) 126, 300, 572, 699, 941, 1093
MspR9I CCNGG 3 cut(s) 941, 1093, 1136
MunI CAATTG 1 cut(s) 432
MvaI CCWGG 1 cut(s) 1136
MwoI GCNNNNNNNGC 2 cut(s) 93, 1003
NciI CCSGG 2 cut(s) 941, 1093
NdeII GATC 8 cut(s) 309, 350, 531, 535, 552, 580, 821, 863
NlaIII CATG 8 cut(s) 291, 340, 454, 507, 619, 688, 897, 912
NlaIV GGNNCC 3 cut(s) 88, 985, 1146
NmeAIII GCCGAG 2 cut(s) 519, 624
NmuCI GTSAC 5 cut(s) 256, 544, 718, 761, 876
NspI RCATGY 2 cut(s) 291, 897
OliI CACNNNNGTG 1 cut(s) 486
PaeI GCATGC 1 cut(s) 291
PcsI WCGNNNNNNNCGW 1 cut(s) 540
PfeI GAWTC 6 cut(s) 305, 403, 568, 836, 1130, 1139
PfoI TCCNGGA 1 cut(s) 1091
PkrI GCNGC 6 cut(s) 33, 610, 907, 921, 1005, 1080
PleI GAGTC 1 cut(s) 636
PpsI GAGTC 1 cut(s) 636
Ppu21I YACGTR 1 cut(s) 333
PshAI GACNNNNGTC 1 cut(s) 111
Psp6I CCWGG 1 cut(s) 1134
PspGI CCWGG 1 cut(s) 1134
PspN4I GGNNCC 3 cut(s) 88, 985, 1146
PspPI GGNCC 3 cut(s) 198, 227, 1144
PstI CTGCAG 1 cut(s) 613
PstNI CAGNNNCTG 1 cut(s) 722
PsuI RGATCY 2 cut(s) 350, 821
RsaI GTAC 3 cut(s) 335, 398, 785
RsaNI GTAC 3 cut(s) 334, 397, 784
RseI CAYNNNNRTG 2 cut(s) 449, 486
SaqAI TTAA 2 cut(s) 375, 513
SatI GCNGC 6 cut(s) 32, 609, 906, 920, 1004, 1079
Sau3AI GATC 8 cut(s) 309, 350, 531, 535, 552, 580, 821, 863
Sau96I GGNCC 3 cut(s) 198, 227, 1144
ScaI AGTACT 1 cut(s) 398
SchI GAGTC 1 cut(s) 636
ScrFI CCNGG 3 cut(s) 941, 1093, 1136
SduI GDGCHC 1 cut(s) 151
SfaNI GCATC 4 cut(s) 228, 331, 446, 717
SfcI CTRYAG 1 cut(s) 609
SinI GGWCC 1 cut(s) 1144
SmiMI CAYNNNNRTG 2 cut(s) 449, 486
SnaBI TACGTA 1 cut(s) 333
SphI GCATGC 1 cut(s) 291
Sse9I AATT 8 cut(s) 156, 378, 432, 472, 654, 804, 816, 1102
SsiI CCGC 1 cut(s) 1076
StyD4I CCNGG 3 cut(s) 939, 1091, 1134
StyI CCWWGG 3 cut(s) 189, 358, 649
TaaI ACNGT 2 cut(s) 133, 718
TaiI ACGT 1 cut(s) 335
TaqI TCGA 5 cut(s) 308, 534, 579, 801, 862
TasI AATT 8 cut(s) 156, 378, 432, 472, 654, 804, 816, 1102
TatI WGTACW 1 cut(s) 396
TfiI GAWTC 6 cut(s) 305, 403, 568, 836, 1130, 1139
Tru1I TTAA 2 cut(s) 375, 513
Tru9I TTAA 2 cut(s) 375, 513
TscAI CASTG 6 cut(s) 19, 136, 319, 723, 873, 960
TseFI GTSAC 5 cut(s) 256, 544, 718, 761, 876
TseI GCWGC 6 cut(s) 31, 608, 905, 919, 1003, 1078
Tsp45I GTSAC 5 cut(s) 256, 544, 718, 761, 876
TspDTI ATGAA 1 cut(s) 863
TspRI CASTG 6 cut(s) 19, 136, 319, 723, 873, 960
VneI GTGCAC 1 cut(s) 147
VpaK11BI GGWCC 1 cut(s) 1144
XagI CCTNNNNNAGG 1 cut(s) 78
XapI RAATTY 3 cut(s) 378, 804, 1102
XceI RCATGY 2 cut(s) 291, 897
XcmI CCANNNNNNNNNTGG 2 cut(s) 451, 488
XmiI GTMKAC 1 cut(s) 1040
ZrmI AGTACT 1 cut(s) 398
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.