pycom15g38930

Belongs to the membrane-bound acyltransferase family

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr15
N/A
Physical Location & Seq
Reverse (-)
38624050 .. 38627630
3581 bp
Loading structure...
UTR
Exon/CDS
Intron
N/A

Sequence Viewer

Length: 438 bp
ATGGCTTGTGAGGTATTTGTACATTCCTCTTGGGGGCACTCGGAGGAAGCTTCTCAATGTATGGGTTGTATTCACATTTGTTGCCATTTGGCATCGAAGGATCTAGAATGGAAGCTTCTTTCGTGGGCATGGCTGACATGCTTATTTTTTATTCCGGAAATGATACTGAAATCAGCAACCAATGCATTTCAGGTTAAGAGTACTCATGGGGAATTTGTTGTTCGTGAACTTAGTGTGGTTGCTGGTGCAGTTACTATCACTTGTCTCATGGTAGCAAACCTTGTTGGTTTTGTTATTGGACCATCTGGGATTAGTTGGTTGATTTCTCAATTCCTTCAACGAGAAGGGCTTCCCGTTTTGGCAGGCATGCTTTTGACATTTTATGTAGGGACAAAGCTTATGTTCCACATCCGCGATGCAAAGCAAAGTAGCAGCTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
MBOAT

Protein Analysis

146

Amino Acids

16.03

Weight (kDa)

6.57

Isoelectric Point (pI)

44.03

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes

No orthologs found for this gene in the current database.

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccII CGCG 1 cut(s) 414
AccIII TCCGGA 1 cut(s) 154
AciI CCGC 1 cut(s) 412
AclWI GGATC 1 cut(s) 108
AcsI RAATTY 1 cut(s) 212
AfaI GTAC 2 cut(s) 21, 202
AfiI CCNNNNNNNGG 1 cut(s) 33
AgsI TTSAA 1 cut(s) 338
AluBI AGCT 4 cut(s) 50, 115, 397, 435
AluI AGCT 4 cut(s) 50, 115, 397, 435
Alw26I GTCTC 1 cut(s) 269
AlwI GGATC 1 cut(s) 108
Aor13HI TCCGGA 1 cut(s) 154
ApeKI GCWGC 1 cut(s) 432
ApoI RAATTY 1 cut(s) 212
Asp700I GAANNNNTTC 1 cut(s) 348
AspS9I GGNCC 1 cut(s) 299
AvaII GGWCC 1 cut(s) 299
BaeGI GKGCMC 1 cut(s) 39
BccI CCATC 1 cut(s) 310
BcoDI GTCTC 1 cut(s) 269
BfaI CTAG 1 cut(s) 104
BisI GCNGC 1 cut(s) 433
BlsI GCNGC 1 cut(s) 434
BmcAI AGTACT 1 cut(s) 202
Bme18I GGWCC 1 cut(s) 299
BmgT120I GGNCC 1 cut(s) 299
BmsI GCATC 2 cut(s) 101, 406
BsaWI WCCGGW 1 cut(s) 154
Bsc4I CCNNNNNNNGG 1 cut(s) 33
BseAI TCCGGA 1 cut(s) 154
BseGI GGATG 1 cut(s) 408
BseLI CCNNNNNNNGG 1 cut(s) 33
BseSI GKGCMC 1 cut(s) 39
BsgI GTGCAG 1 cut(s) 267
Bsh1236I CGCG 1 cut(s) 414
BsiSI CCGG 1 cut(s) 155
BslFI GGGAC 1 cut(s) 403
BslI CCNNNNNNNGG 1 cut(s) 33
BsmAI GTCTC 1 cut(s) 269
BsmFI GGGAC 1 cut(s) 403
Bsp1286I GDGCHC 1 cut(s) 39
Bsp13I TCCGGA 1 cut(s) 154
Bsp1407I TGTACA 1 cut(s) 19
Bsp143I GATC 1 cut(s) 100
BspACI CCGC 1 cut(s) 412
BspEI TCCGGA 1 cut(s) 154
BspFNI CGCG 1 cut(s) 414
BspPI GGATC 1 cut(s) 108
BsrGI TGTACA 1 cut(s) 19
BssMI GATC 1 cut(s) 100
BstAPI GCANNNNNTGC 1 cut(s) 182
BstAUI TGTACA 1 cut(s) 19
BstC8I GCNNGC 2 cut(s) 364, 368
BstDEI CTNAG 1 cut(s) 230
BstF5I GGATG 1 cut(s) 408
BstFNI CGCG 1 cut(s) 414
BstKTI GATC 1 cut(s) 103
BstMAI GTCTC 1 cut(s) 269
BstMBI GATC 1 cut(s) 100
BstMWI GCNNNNNNNGC 1 cut(s) 182
BstNSI RCATGY 2 cut(s) 141, 370
BstSLI GKGCMC 1 cut(s) 39
BstUI CGCG 1 cut(s) 414
BstX2I RGATCY 1 cut(s) 100
BstYI RGATCY 1 cut(s) 100
BtgZI GCGATG 1 cut(s) 429
BtsCI GGATG 1 cut(s) 408
Cac8I GCNNGC 2 cut(s) 364, 368
Cfr13I GGNCC 1 cut(s) 299
Csp6I GTAC 2 cut(s) 20, 201
CviAII CATG 5 cut(s) 129, 138, 206, 268, 367
CviJI RGCY 7 cut(s) 5, 50, 115, 133, 349, 397, 435
CviKI_1 RGCY 7 cut(s) 5, 50, 115, 133, 349, 397, 435
CviQI GTAC 2 cut(s) 20, 201
DdeI CTNAG 1 cut(s) 230
DpnI GATC 1 cut(s) 102
DpnII GATC 1 cut(s) 100
Eco47I GGWCC 1 cut(s) 299
EcoT22I ATGCAT 1 cut(s) 187
FaeI CATG 5 cut(s) 132, 141, 209, 271, 370
FaiI YATR 8 cut(s) 62, 130, 139, 207, 269, 368, 384, 401
FaqI GGGAC 1 cut(s) 403
FatI CATG 5 cut(s) 128, 137, 205, 267, 366
Fnu4HI GCNGC 1 cut(s) 433
FokI GGATG 1 cut(s) 395
Fsp4HI GCNGC 1 cut(s) 433
FspBI CTAG 1 cut(s) 104
GluI GCNGC 1 cut(s) 433
HapII CCGG 1 cut(s) 155
Hin1II CATG 5 cut(s) 132, 141, 209, 271, 370
HindIII AAGCTT 3 cut(s) 48, 113, 395
HpaII CCGG 1 cut(s) 155
Hpy166II GTNNAC 1 cut(s) 227
Hpy188I TCNGA 1 cut(s) 43
Hpy188III TCNNGA 3 cut(s) 104, 155, 224
Hpy8I GTNNAC 1 cut(s) 227
HpyAV CCTTC 3 cut(s) 91, 338, 344
HpyCH4V TGCA 3 cut(s) 185, 248, 419
HpyF10VI GCNNNNNNNGC 1 cut(s) 182
HpyF3I CTNAG 1 cut(s) 230
Hsp92II CATG 5 cut(s) 132, 141, 209, 271, 370
Kpn2I TCCGGA 1 cut(s) 154
Kzo9I GATC 1 cut(s) 100
LpnPI CCDG 5 cut(s) 168, 176, 228, 291, 348
LweI GCATC 2 cut(s) 101, 406
MaeI CTAG 1 cut(s) 104
MaeIII GTNAC 1 cut(s) 250
MalI GATC 1 cut(s) 102
MboI GATC 1 cut(s) 100
MflI RGATCY 1 cut(s) 100
MhlI GDGCHC 1 cut(s) 39
MluCI AATT 2 cut(s) 212, 329
MnlI CCTC 3 cut(s) 4, 37, 37
Mph1103I ATGCAT 1 cut(s) 187
MroI TCCGGA 1 cut(s) 154
MroXI GAANNNNTTC 1 cut(s) 348
MseI TTAA 1 cut(s) 195
MspI CCGG 1 cut(s) 155
MvnI CGCG 1 cut(s) 414
MwoI GCNNNNNNNGC 1 cut(s) 182
NdeII GATC 1 cut(s) 100
NlaIII CATG 5 cut(s) 132, 141, 209, 271, 370
NsiI ATGCAT 1 cut(s) 187
NspI RCATGY 2 cut(s) 141, 370
PaeI GCATGC 1 cut(s) 370
PdmI GAANNNNTTC 1 cut(s) 348
PkrI GCNGC 1 cut(s) 434
PspPI GGNCC 1 cut(s) 299
PsuI RGATCY 1 cut(s) 100
RsaI GTAC 2 cut(s) 21, 202
RsaNI GTAC 2 cut(s) 20, 201
SaqAI TTAA 1 cut(s) 195
SatI GCNGC 1 cut(s) 433
Sau3AI GATC 1 cut(s) 100
Sau96I GGNCC 1 cut(s) 299
ScaI AGTACT 1 cut(s) 202
SduI GDGCHC 1 cut(s) 39
SetI ASST 7 cut(s) 15, 52, 117, 195, 282, 399, 437
SfaNI GCATC 2 cut(s) 101, 406
SinI GGWCC 1 cut(s) 299
SphI GCATGC 1 cut(s) 370
Sse9I AATT 2 cut(s) 212, 329
SsiI CCGC 1 cut(s) 412
SspMI CTAG 1 cut(s) 104
TaqI TCGA 1 cut(s) 95
TasI AATT 2 cut(s) 212, 329
TatI WGTACW 2 cut(s) 19, 200
Tru1I TTAA 1 cut(s) 195
Tru9I TTAA 1 cut(s) 195
TseI GCWGC 1 cut(s) 432
VpaK11BI GGWCC 1 cut(s) 299
XapI RAATTY 1 cut(s) 212
XbaI TCTAGA 1 cut(s) 103
XceI RCATGY 2 cut(s) 141, 370
XmnI GAANNNNTTC 1 cut(s) 348
XspI CTAG 1 cut(s) 104
ZrmI AGTACT 1 cut(s) 202
Zsp2I ATGCAT 1 cut(s) 187
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.