pycom16g01280

Purple acid phosphatase

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr16
N/A
Physical Location & Seq
Forward (+)
814813 .. 815061
249 bp
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UTR
Exon/CDS
Intron
N/A

Sequence Viewer

Length: 204 bp
ATGGAGTCAAATTCAGTTCCTTACAAGTGGAGGTGGATGAAAGTTGTATTACGAATTTACGACGGCCAAGGCTTTATGTCGTTTCAAATGACCAAGGCCACTGCTGCCGTTGCGTACTATGATGACTCTGGCAATGTTTTGCACAAATGGAGCCTCTCCAAAGAGATCGACTCAGCCACTCACAGAACATTCACCTATTCTTAA

Protein Analysis

68

Amino Acids

7.83

Weight (kDa)

9.05

Isoelectric Point (pI)

57.06

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Orthologous Genes

No orthologs found for this gene in the current database.

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AcoI YGGCCR 1 cut(s) 64
AcsI RAATTY 2 cut(s) 10, 54
AfaI GTAC 1 cut(s) 116
AgsI TTSAA 1 cut(s) 86
AoxI GGCC 2 cut(s) 64, 96
ApeKI GCWGC 1 cut(s) 104
ApoI RAATTY 2 cut(s) 10, 54
AsuHPI GGTGA 1 cut(s) 184
BbvI GCAGC 1 cut(s) 91
BceAI ACGGC 2 cut(s) 79, 92
BisI GCNGC 1 cut(s) 105
BlsI GCNGC 1 cut(s) 106
BmiI GGNNCC 1 cut(s) 152
BplI GAGNNNNNCTC 2 cut(s) 155, 187
BsaJI CCNNGG 2 cut(s) 67, 93
Bse3DI GCAATG 1 cut(s) 139
BseDI CCNNGG 2 cut(s) 67, 93
BseGI GGATG 1 cut(s) 42
BseMI GCAATG 1 cut(s) 139
BseMII CTCAG 1 cut(s) 186
BseXI GCAGC 1 cut(s) 91
BshFI GGCC 2 cut(s) 66, 98
BsnI GGCC 2 cut(s) 66, 98
Bsp143I GATC 1 cut(s) 165
BspANI GGCC 2 cut(s) 66, 98
BspCNI CTCAG 1 cut(s) 185
BspLI GGNNCC 1 cut(s) 152
BsrDI GCAATG 1 cut(s) 139
BssECI CCNNGG 2 cut(s) 67, 93
BssMI GATC 1 cut(s) 165
BssT1I CCWWGG 2 cut(s) 67, 93
BstDEI CTNAG 1 cut(s) 172
BstF5I GGATG 1 cut(s) 42
BstKTI GATC 1 cut(s) 168
BstMBI GATC 1 cut(s) 165
BstMWI GCNNNNNNNGC 2 cut(s) 104, 110
BstV1I GCAGC 1 cut(s) 91
BsuRI GGCC 2 cut(s) 66, 98
BtsCI GGATG 1 cut(s) 42
BtsI GCAGTG 1 cut(s) 99
BtsIMutI CAGTG 1 cut(s) 99
Csp6I GTAC 1 cut(s) 115
CviJI RGCY 5 cut(s) 66, 72, 98, 153, 176
CviKI_1 RGCY 5 cut(s) 66, 72, 98, 153, 176
CviQI GTAC 1 cut(s) 115
DdeI CTNAG 1 cut(s) 172
DpnI GATC 1 cut(s) 167
DpnII GATC 1 cut(s) 165
EaeI YGGCCR 1 cut(s) 64
Eco130I CCWWGG 2 cut(s) 67, 93
EcoT14I CCWWGG 2 cut(s) 67, 93
ErhI CCWWGG 2 cut(s) 67, 93
FaiI YATR 2 cut(s) 77, 120
Fnu4HI GCNGC 1 cut(s) 105
FokI GGATG 1 cut(s) 49
Fsp4HI GCNGC 1 cut(s) 105
GluI GCNGC 1 cut(s) 105
HaeIII GGCC 2 cut(s) 66, 98
HinfI GANTC 3 cut(s) 5, 125, 170
HphI GGTGA 1 cut(s) 184
Hpy99I CGWCG 1 cut(s) 65
HpyCH4V TGCA 1 cut(s) 142
HpyF10VI GCNNNNNNNGC 2 cut(s) 104, 110
HpyF3I CTNAG 1 cut(s) 172
Kzo9I GATC 1 cut(s) 165
LmnI GCTCC 1 cut(s) 150
LpnPI CCDG 1 cut(s) 114
Lsp1109I GCAGC 1 cut(s) 91
MalI GATC 1 cut(s) 167
MboI GATC 1 cut(s) 165
MluCI AATT 2 cut(s) 10, 54
MlyI GAGTC 3 cut(s) 14, 119, 164
MnlI CCTC 2 cut(s) 24, 164
MseI TTAA 1 cut(s) 202
MwoI GCNNNNNNNGC 2 cut(s) 104, 110
NdeII GATC 1 cut(s) 165
NlaIV GGNNCC 1 cut(s) 152
PkrI GCNGC 1 cut(s) 106
PleI GAGTC 3 cut(s) 13, 119, 164
PpsI GAGTC 3 cut(s) 13, 119, 164
PspN4I GGNNCC 1 cut(s) 152
RsaI GTAC 1 cut(s) 116
RsaNI GTAC 1 cut(s) 115
SaqAI TTAA 1 cut(s) 202
SatI GCNGC 1 cut(s) 105
Sau3AI GATC 1 cut(s) 165
SchI GAGTC 3 cut(s) 14, 119, 164
SetI ASST 2 cut(s) 35, 197
SgeI CNNG 4 cut(s) 37, 80, 106, 141
Sse9I AATT 2 cut(s) 10, 54
StyI CCWWGG 2 cut(s) 67, 93
TaqI TCGA 1 cut(s) 168
TasI AATT 2 cut(s) 10, 54
Tru1I TTAA 1 cut(s) 202
Tru9I TTAA 1 cut(s) 202
TscAI CASTG 1 cut(s) 106
TseI GCWGC 1 cut(s) 104
TspDTI ATGAA 1 cut(s) 53
TspRI CASTG 1 cut(s) 106
XapI RAATTY 2 cut(s) 10, 54
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.