pycom16g03570

Universal stress protein A-like

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr16
N/A
Physical Location & Seq
Forward (+)
2208872 .. 2209517
646 bp
Loading structure...
UTR
Exon/CDS
Intron
N/A

Sequence Viewer

Length: 501 bp
ATGGGAGAAGAAGCAATTGCGAGAGGAGAAGAAAGAATGGGAGAAGCGATTGCAAGAGGAGCTGAGAAGAGGGTGATGGTGGCCATTGACGAGAGCGAGTGCAGTCATTACGCGCTCATGTGGGTTCTCGACAACCTCAAAGATTCCATAACCAAGTCGCCCTTGATCATCTTCACGGCTCAGACTCCCTCCGCTGGCAACGTCATCTTCTCGGCATCGCTCGGCAGTGCTCGCATGTACTATCCTATGTCTTCCAGTCAGGAGCTTGTTAACTCCTCCCAGGAAAATCACAGGAAGTTTGCGTTGGGGCTGTTGGAGAAAGCTAAAGAGATCTGTGCTAATCATGGGGTAGGGCCAAAGTTCTTCGTTCTTCAATCACAAAACTTTATGTGTGCGTATATATATACTTGTATTTGTTTGTATATAGTATATACTATTCGTATAAGTACTTCTTTTGAGACTGCTTTTGGTAGATTCCCTACTTATATGTGTTTTTACTAG

Protein Analysis

167

Amino Acids

18.62

Weight (kDa)

6.3

Isoelectric Point (pI)

48.47

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Orthologous Genes

No orthologs found for this gene in the current database.

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccII CGCG 1 cut(s) 113
AciI CCGC 1 cut(s) 192
AcoI YGGCCR 1 cut(s) 81
AfaI GTAC 2 cut(s) 239, 448
AfiI CCNNNNNNNGG 1 cut(s) 194
AgsI TTSAA 1 cut(s) 374
AjnI CCWGG 1 cut(s) 279
AjuI GAANNNNNNNTTGG 2 cut(s) 287, 319
AluBI AGCT 3 cut(s) 62, 265, 323
AluI AGCT 3 cut(s) 62, 265, 323
Alw21I GWGCWC 1 cut(s) 232
Alw26I GTCTC 1 cut(s) 452
AoxI GGCC 2 cut(s) 81, 353
AspLEI GCGC 1 cut(s) 115
AspS9I GGNCC 1 cut(s) 353
AsuHPI GGTGA 1 cut(s) 85
BalI TGGCCA 1 cut(s) 83
BarI GAAGNNNNNNTAC 2 cut(s) 433, 465
BbsI GAAGAC 1 cut(s) 243
Bbv12I GWGCWC 1 cut(s) 232
BccI CCATC 1 cut(s) 70
BceAI ACGGC 1 cut(s) 192
BciT130I CCWGG 1 cut(s) 281
BclI TGATCA 1 cut(s) 165
BcoDI GTCTC 1 cut(s) 452
BfaI CTAG 1 cut(s) 499
BglII AGATCT 1 cut(s) 330
BmcAI AGTACT 1 cut(s) 448
Bme1390I CCNGG 1 cut(s) 281
BmgT120I GGNCC 1 cut(s) 353
BmrFI CCNGG 1 cut(s) 281
BmsI GCATC 1 cut(s) 224
BpiI GAAGAC 1 cut(s) 243
BsaJI CCNNGG 1 cut(s) 279
Bsc4I CCNNNNNNNGG 1 cut(s) 194
Bse1I ACTGG 1 cut(s) 255
BseBI CCWGG 1 cut(s) 281
BseDI CCNNGG 1 cut(s) 279
BseLI CCNNNNNNNGG 1 cut(s) 194
BseMII CTCAG 2 cut(s) 54, 194
BseNI ACTGG 1 cut(s) 255
BseRI GAGGAG 3 cut(s) 39, 72, 265
BsgI GTGCAG 1 cut(s) 121
Bsh1236I CGCG 1 cut(s) 113
BshFI GGCC 2 cut(s) 83, 355
BsiHKAI GWGCWC 1 cut(s) 232
BslI CCNNNNNNNGG 1 cut(s) 194
BsmAI GTCTC 1 cut(s) 452
BsnI GGCC 2 cut(s) 83, 355
Bsp1286I GDGCHC 1 cut(s) 232
Bsp143I GATC 2 cut(s) 165, 330
BspACI CCGC 1 cut(s) 192
BspANI GGCC 2 cut(s) 83, 355
BspCNI CTCAG 2 cut(s) 55, 193
BspFNI CGCG 1 cut(s) 113
BsrI ACTGG 1 cut(s) 255
BssECI CCNNGG 1 cut(s) 279
BssMI GATC 2 cut(s) 165, 330
Bst2UI CCWGG 1 cut(s) 281
Bst6I CTCTTC 1 cut(s) 62
BstC8I GCNNGC 2 cut(s) 196, 232
BstDEI CTNAG 2 cut(s) 63, 180
BstFNI CGCG 1 cut(s) 113
BstHHI GCGC 1 cut(s) 115
BstKTI GATC 2 cut(s) 168, 333
BstMAI GTCTC 1 cut(s) 452
BstMBI GATC 2 cut(s) 165, 330
BstMWI GCNNNNNNNGC 2 cut(s) 59, 231
BstNI CCWGG 1 cut(s) 281
BstNSI RCATGY 1 cut(s) 238
BstSCI CCNGG 1 cut(s) 279
BstUI CGCG 1 cut(s) 113
BstV2I GAAGAC 1 cut(s) 243
BstX2I RGATCY 1 cut(s) 330
BstYI RGATCY 1 cut(s) 330
BsuRI GGCC 2 cut(s) 83, 355
BtgZI GCGATG 1 cut(s) 201
BtsI GCAGTG 1 cut(s) 232
BtsIMutI CAGTG 1 cut(s) 232
Cac8I GCNNGC 2 cut(s) 196, 232
CfoI GCGC 1 cut(s) 115
Cfr13I GGNCC 1 cut(s) 353
Csp6I GTAC 2 cut(s) 238, 447
CviAII CATG 3 cut(s) 118, 235, 344
CviJI RGCY 7 cut(s) 62, 83, 179, 265, 310, 323, 355
CviKI_1 RGCY 7 cut(s) 62, 83, 179, 265, 310, 323, 355
CviQI GTAC 2 cut(s) 238, 447
DdeI CTNAG 2 cut(s) 63, 180
DpnI GATC 2 cut(s) 167, 332
DpnII GATC 2 cut(s) 165, 330
EaeI YGGCCR 1 cut(s) 81
Eam1104I CTCTTC 1 cut(s) 62
EarI CTCTTC 1 cut(s) 62
EcoRII CCWGG 1 cut(s) 279
FaeI CATG 3 cut(s) 121, 238, 347
FalI AAGNNNNNCTT 4 cut(s) 146, 178, 436, 468
FatI CATG 3 cut(s) 117, 234, 343
FbaI TGATCA 1 cut(s) 165
FspBI CTAG 1 cut(s) 499
GlaI GCGC 1 cut(s) 114
HaeIII GGCC 2 cut(s) 83, 355
HhaI GCGC 1 cut(s) 115
Hin1II CATG 3 cut(s) 121, 238, 347
Hin6I GCGC 1 cut(s) 113
HinP1I GCGC 1 cut(s) 113
HincII GTYRAC 1 cut(s) 271
HindII GTYRAC 1 cut(s) 271
HinfI GANTC 3 cut(s) 143, 184, 474
HpaI GTTAAC 1 cut(s) 271
HphI GGTGA 1 cut(s) 85
Hpy166II GTNNAC 1 cut(s) 271
Hpy188I TCNGA 1 cut(s) 183
Hpy188III TCNNGA 2 cut(s) 128, 260
Hpy8I GTNNAC 1 cut(s) 271
HpyCH4IV ACGT 1 cut(s) 201
HpyCH4V TGCA 2 cut(s) 53, 102
HpyF10VI GCNNNNNNNGC 2 cut(s) 59, 231
HpyF3I CTNAG 2 cut(s) 63, 180
HpySE526I ACGT 1 cut(s) 201
Hsp92II CATG 3 cut(s) 121, 238, 347
HspAI GCGC 1 cut(s) 113
Ksp22I TGATCA 1 cut(s) 165
KspAI GTTAAC 1 cut(s) 271
Kzo9I GATC 2 cut(s) 165, 330
LmnI GCTCC 2 cut(s) 59, 262
LpnPI CCDG 6 cut(s) 180, 245, 266, 268, 277, 293
LweI GCATC 1 cut(s) 224
MaeI CTAG 1 cut(s) 499
MaeII ACGT 1 cut(s) 201
MalI GATC 2 cut(s) 167, 332
MboI GATC 2 cut(s) 165, 330
MboII GAAGA 8 cut(s) 20, 41, 79, 163, 199, 243, 355, 362
MfeI CAATTG 1 cut(s) 15
MflI RGATCY 1 cut(s) 330
MhlI GDGCHC 1 cut(s) 232
MlsI TGGCCA 1 cut(s) 83
MluCI AATT 1 cut(s) 15
MluNI TGGCCA 1 cut(s) 83
MlyI GAGTC 1 cut(s) 178
MmeI TCCRAC 1 cut(s) 294
MnlI CCTC 6 cut(s) 17, 50, 63, 146, 199, 286
Mox20I TGGCCA 1 cut(s) 83
MscI TGGCCA 1 cut(s) 83
MseI TTAA 1 cut(s) 270
Msp20I TGGCCA 1 cut(s) 83
MspA1I CMGCKG 1 cut(s) 194
MspR9I CCNGG 1 cut(s) 281
MunI CAATTG 1 cut(s) 15
MvaI CCWGG 1 cut(s) 281
MvnI CGCG 1 cut(s) 113
MwoI GCNNNNNNNGC 2 cut(s) 59, 231
NdeII GATC 2 cut(s) 165, 330
NlaIII CATG 3 cut(s) 121, 238, 347
NmeAIII GCCGAG 2 cut(s) 191, 201
NspI RCATGY 1 cut(s) 238
PfeI GAWTC 2 cut(s) 143, 474
PleI GAGTC 1 cut(s) 178
PpsI GAGTC 1 cut(s) 178
Psp6I CCWGG 1 cut(s) 279
PspGI CCWGG 1 cut(s) 279
PspPI GGNCC 1 cut(s) 353
PsuI RGATCY 1 cut(s) 330
RsaI GTAC 2 cut(s) 239, 448
RsaNI GTAC 2 cut(s) 238, 447
SaqAI TTAA 1 cut(s) 270
Sau3AI GATC 2 cut(s) 165, 330
Sau96I GGNCC 1 cut(s) 353
ScaI AGTACT 1 cut(s) 448
SchI GAGTC 1 cut(s) 178
ScrFI CCNGG 1 cut(s) 281
SduI GDGCHC 1 cut(s) 232
SetI ASST 5 cut(s) 64, 138, 204, 267, 325
SfaNI GCATC 1 cut(s) 224
Sse9I AATT 1 cut(s) 15
SsiI CCGC 1 cut(s) 192
SspMI CTAG 1 cut(s) 499
StyD4I CCNGG 1 cut(s) 279
TaiI ACGT 1 cut(s) 204
TaqI TCGA 1 cut(s) 129
TasI AATT 1 cut(s) 15
TatI WGTACW 2 cut(s) 237, 446
TfiI GAWTC 2 cut(s) 143, 474
Tru1I TTAA 1 cut(s) 270
Tru9I TTAA 1 cut(s) 270
TscAI CASTG 1 cut(s) 232
TspRI CASTG 1 cut(s) 232
XceI RCATGY 1 cut(s) 238
XspI CTAG 1 cut(s) 499
ZrmI AGTACT 1 cut(s) 448
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.