pycom16g06470

Ran guanine nucleotide release

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr16
N/A
Physical Location & Seq
Forward (+)
4144605 .. 4146896
2292 bp
Loading structure...
UTR
Exon/CDS
Intron
N/A

Sequence Viewer

Length: 834 bp
ATGATCGTAGTTACACATTTTGATGAGTTGAAGGACCATTACTCTAATTTAATTAAAATTGAAGGACATTCAACTGCACGCGATAAATACACACAAAAATCAGCGGACAGCAGAATTCGAACTTTCAGAAGCTTCCGCAGAAGAAACCAGAAGCTTCTGCTTCTCAGAGTAACAAAACGACCCCGCTTGCCTCGGTGTTTCCCATCGCCGAAGAAAATGTCCCAAGATATCTACTCCGAGCGCCCCTTGTTCGGCGGCGCCATTACTAGCACCTTCCCTCTCAGATTCGAGGTCAGATGTGAGCAACATTCGGCAAGTTCCCGATCGACCAGGTTCGAGGCTTTTGTGGACCCCGCCCGGGACGAAAGCTTGATCTTTGAGCTCTTGGAGTTGAAGCATGAAGTCGGCGACAATGGAAGCGCCAACTGGTTTCTTCAGGACCTTGCCACTGAGCAAGATGCTGACGGGAGCATGGTGATCGAGCAGTCTGGCGTAATGGAGGCCCCCAGATTGTGTTATAGAAACACACCTGCTGTTGTTACGACTGCTGTTGGCCAAATGGCAATTTCGAAAGGGCGGCAAGGAAGGGAAGCGCAAAATATTGTGAGGGTCTATGTAGCAAATTTGCGCCTTAAGGAAGTTAATACAGATGTGCTGATTACTGCATATGAGCCCGTTCATATAAATCCTTTGAGCGAAAGTGCAAACACCGTGGGGGCTGGTTTTGCTGTTCCTGCAGTACAATCCGGGCATATGCCAGTGGCCGAGGTCTTTAAACTCGCCGTCTCTAGCTTCAGGGTCAATGACTGGAATCTTTTTGGTTCTGTTGTCTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
Mog1

Protein Analysis

278

Amino Acids

31.18

Weight (kDa)

9.15

Isoelectric Point (pI)

51.91

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Mog1 PF04603 81 - 225 1.4e-24 Ran-interacting Mog1 protein
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes

No orthologs found for this gene in the current database.

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 538
Acc36I ACCTGC 1 cut(s) 538
AccB1I GGYRCC 1 cut(s) 257
AccII CGCG 1 cut(s) 81
AciI CCGC 6 cut(s) 104, 136, 184, 255, 354, 577
AcoI YGGCCR 2 cut(s) 553, 762
AcsI RAATTY 2 cut(s) 114, 622
AcuI CTGAAG 2 cut(s) 419, 778
AcyI GRCGYC 1 cut(s) 258
AfaI GTAC 1 cut(s) 741
AfiI CCNNNNNNNGG 2 cut(s) 251, 358
AflII CTTAAG 1 cut(s) 632
AgsI TTSAA 4 cut(s) 31, 62, 72, 394
AjnI CCWGG 1 cut(s) 329
AluBI AGCT 5 cut(s) 132, 154, 369, 382, 792
AluI AGCT 5 cut(s) 132, 154, 369, 382, 792
Alw21I GWGCWC 1 cut(s) 384
Alw26I GTCTC 1 cut(s) 790
Ama87I CYCGRG 1 cut(s) 357
AoxI GGCC 3 cut(s) 501, 553, 762
ApoI RAATTY 2 cut(s) 114, 622
ArsI GACNNNNNNTTYG 2 cut(s) 203, 235
AspLEI GCGC 5 cut(s) 243, 260, 422, 595, 630
AspS9I GGNCC 4 cut(s) 34, 349, 439, 502
AsuC2I CCSGG 3 cut(s) 358, 359, 748
AsuHPI GGTGA 1 cut(s) 487
AsuII TTCGAA 2 cut(s) 118, 569
AvaI CYCGRG 1 cut(s) 357
AvaII GGWCC 3 cut(s) 34, 349, 439
BalI TGGCCA 1 cut(s) 555
BanI GGYRCC 1 cut(s) 257
BanII GRGCYC 2 cut(s) 384, 675
BarI GAAGNNNNNNTAC 2 cut(s) 23, 55
Bbv12I GWGCWC 1 cut(s) 384
BccI CCATC 1 cut(s) 211
BceAI ACGGC 1 cut(s) 767
BcgI CGANNNNNNTGC 2 cut(s) 460, 494
BciT130I CCWGG 1 cut(s) 331
BcnI CCSGG 3 cut(s) 358, 359, 748
BcoDI GTCTC 1 cut(s) 790
BfaI CTAG 2 cut(s) 267, 789
BfmI CTRYAG 1 cut(s) 735
BfoI RGCGCY 3 cut(s) 244, 261, 423
BfrI CTTAAG 1 cut(s) 632
BfuAI ACCTGC 1 cut(s) 538
BisI GCNGC 2 cut(s) 256, 578
BlsI GCNGC 2 cut(s) 257, 579
Bme1390I CCNGG 4 cut(s) 331, 358, 359, 748
Bme18I GGWCC 3 cut(s) 34, 349, 439
BmeT110I CYCGRG 1 cut(s) 357
BmgT120I GGNCC 4 cut(s) 34, 349, 439, 502
BmiI GGNNCC 3 cut(s) 259, 351, 504
BmrFI CCNGG 4 cut(s) 331, 358, 359, 748
BmsI GCATC 1 cut(s) 448
Bpu14I TTCGAA 2 cut(s) 118, 569
BpuMI CCSGG 3 cut(s) 358, 359, 748
BsaHI GRCGYC 1 cut(s) 258
BsaJI CCNNGG 4 cut(s) 191, 357, 711, 765
Bsc4I CCNNNNNNNGG 2 cut(s) 251, 358
Bse1I ACTGG 3 cut(s) 431, 758, 812
BseBI CCWGG 1 cut(s) 331
BseDI CCNNGG 4 cut(s) 191, 357, 711, 765
BseLI CCNNNNNNNGG 2 cut(s) 251, 358
BseMII CTCAG 3 cut(s) 178, 295, 441
BseNI ACTGG 3 cut(s) 431, 758, 812
BsgI GTGCAG 1 cut(s) 60
Bsh1236I CGCG 1 cut(s) 81
Bsh1285I CGRYCG 1 cut(s) 326
BshFI GGCC 3 cut(s) 503, 555, 764
BshNI GGYRCC 1 cut(s) 257
BsiEI CGRYCG 1 cut(s) 326
BsiHKAI GWGCWC 1 cut(s) 384
BsiHKCI CYCGRG 1 cut(s) 357
BsiSI CCGG 2 cut(s) 358, 747
BslFI GGGAC 2 cut(s) 205, 374
BslI CCNNNNNNNGG 2 cut(s) 251, 358
BsmAI GTCTC 1 cut(s) 790
BsmBI CGTCTC 1 cut(s) 790
BsmFI GGGAC 2 cut(s) 205, 374
BsnI GGCC 3 cut(s) 503, 555, 764
BsoBI CYCGRG 1 cut(s) 357
Bsp119I TTCGAA 2 cut(s) 118, 569
Bsp1286I GDGCHC 2 cut(s) 384, 675
Bsp143I GATC 4 cut(s) 3, 323, 372, 477
BspACI CCGC 6 cut(s) 104, 136, 184, 255, 354, 577
BspANI GGCC 3 cut(s) 503, 555, 764
BspCNI CTCAG 3 cut(s) 177, 294, 442
BspFNI CGCG 1 cut(s) 81
BspLI GGNNCC 3 cut(s) 259, 351, 504
BspMAI CTGCAG 1 cut(s) 739
BspMI ACCTGC 1 cut(s) 538
BspT104I TTCGAA 2 cut(s) 118, 569
BspT107I GGYRCC 1 cut(s) 257
BspTI CTTAAG 1 cut(s) 632
BsrI ACTGG 3 cut(s) 431, 758, 812
BssECI CCNNGG 4 cut(s) 191, 357, 711, 765
BssMI GATC 4 cut(s) 3, 323, 372, 477
BssNI GRCGYC 1 cut(s) 258
Bst2UI CCWGG 1 cut(s) 331
Bst4CI ACNGT 1 cut(s) 712
BstACI GRCGYC 1 cut(s) 258
BstAFI CTTAAG 1 cut(s) 632
BstBI TTCGAA 2 cut(s) 118, 569
BstC8I GCNNGC 2 cut(s) 79, 188
BstDEI CTNAG 3 cut(s) 164, 281, 450
BstDSI CCRYGG 1 cut(s) 711
BstFNI CGCG 1 cut(s) 81
BstH2I RGCGCY 3 cut(s) 244, 261, 423
BstHHI GCGC 5 cut(s) 243, 260, 422, 595, 630
BstKTI GATC 4 cut(s) 6, 326, 375, 480
BstMAI GTCTC 1 cut(s) 790
BstMBI GATC 4 cut(s) 3, 323, 372, 477
BstMCI CGRYCG 1 cut(s) 326
BstMWI GCNNNNNNNGC 2 cut(s) 725, 734
BstNI CCWGG 1 cut(s) 331
BstSCI CCNGG 4 cut(s) 329, 356, 357, 746
BstSFI CTRYAG 1 cut(s) 735
BstUI CGCG 1 cut(s) 81
BsuRI GGCC 3 cut(s) 503, 555, 764
BtgI CCRYGG 1 cut(s) 711
BtgZI GCGATG 1 cut(s) 189
BtsIMutI CAGTG 2 cut(s) 447, 765
BveI ACCTGC 1 cut(s) 538
Cac8I GCNNGC 2 cut(s) 79, 188
CfoI GCGC 5 cut(s) 243, 260, 422, 595, 630
Cfr13I GGNCC 4 cut(s) 34, 349, 439, 502
Cfr9I CCCGGG 1 cut(s) 357
CsiI ACCWGGT 1 cut(s) 329
Csp6I GTAC 1 cut(s) 740
CspCI CAANNNNNGTGG 2 cut(s) 693, 728
CviAII CATG 2 cut(s) 398, 472
CviQI GTAC 1 cut(s) 740
DdeI CTNAG 3 cut(s) 164, 281, 450
DinI GGCGCC 1 cut(s) 259
DpnI GATC 4 cut(s) 5, 325, 374, 479
DpnII GATC 4 cut(s) 3, 323, 372, 477
DraI TTTAAA 1 cut(s) 775
EaeI YGGCCR 2 cut(s) 553, 762
Ecl136II GAGCTC 1 cut(s) 382
Eco24I GRGCYC 2 cut(s) 384, 675
Eco32I GATATC 1 cut(s) 229
Eco47I GGWCC 3 cut(s) 34, 349, 439
Eco53kI GAGCTC 1 cut(s) 382
Eco57I CTGAAG 2 cut(s) 419, 778
Eco88I CYCGRG 1 cut(s) 357
EcoICRI GAGCTC 1 cut(s) 382
EcoO109I RGGNCCY 2 cut(s) 439, 502
EcoRI GAATTC 1 cut(s) 114
EcoRII CCWGG 1 cut(s) 329
EcoRV GATATC 1 cut(s) 229
EcoT38I GRGCYC 2 cut(s) 384, 675
EgeI GGCGCC 1 cut(s) 259
EheI GGCGCC 1 cut(s) 259
Esp3I CGTCTC 1 cut(s) 790
FaeI CATG 2 cut(s) 401, 475
FaqI GGGAC 2 cut(s) 205, 374
FatI CATG 2 cut(s) 397, 471
FauI CCCGC 2 cut(s) 191, 361
FauNDI CATATG 2 cut(s) 667, 753
Fnu4HI GCNGC 2 cut(s) 256, 578
FriOI GRGCYC 2 cut(s) 384, 675
Fsp4HI GCNGC 2 cut(s) 256, 578
FspBI CTAG 2 cut(s) 267, 789
GlaI GCGC 5 cut(s) 242, 259, 421, 594, 629
GluI GCNGC 2 cut(s) 256, 578
HaeII RGCGCY 3 cut(s) 244, 261, 423
HaeIII GGCC 3 cut(s) 503, 555, 764
HapII CCGG 2 cut(s) 358, 747
HhaI GCGC 5 cut(s) 243, 260, 422, 595, 630
Hin1I GRCGYC 1 cut(s) 258
Hin1II CATG 2 cut(s) 401, 475
Hin6I GCGC 5 cut(s) 241, 258, 420, 593, 628
HinP1I GCGC 5 cut(s) 241, 258, 420, 593, 628
HindIII AAGCTT 3 cut(s) 130, 152, 367
HinfI GANTC 2 cut(s) 285, 811
HpaII CCGG 2 cut(s) 358, 747
HphI GGTGA 1 cut(s) 487
Hpy166II GTNNAC 1 cut(s) 349
Hpy188I TCNGA 6 cut(s) 128, 167, 238, 284, 296, 833
Hpy188III TCNNGA 2 cut(s) 321, 437
Hpy8I GTNNAC 1 cut(s) 349
HpyAV CCTTC 4 cut(s) 25, 56, 283, 579
HpyCH4III ACNGT 1 cut(s) 712
HpyCH4V TGCA 4 cut(s) 77, 665, 704, 737
HpyF10VI GCNNNNNNNGC 2 cut(s) 725, 734
HpyF3I CTNAG 3 cut(s) 164, 281, 450
Hsp92I GRCGYC 1 cut(s) 258
Hsp92II CATG 2 cut(s) 401, 475
HspAI GCGC 5 cut(s) 241, 258, 420, 593, 628
KasI GGCGCC 1 cut(s) 257
Kzo9I GATC 4 cut(s) 3, 323, 372, 477
LmnI GCTCC 1 cut(s) 468
LweI GCATC 1 cut(s) 448
MabI ACCWGGT 1 cut(s) 329
MaeI CTAG 2 cut(s) 267, 789
MaeIII GTNAC 3 cut(s) 10, 169, 538
MalI GATC 4 cut(s) 5, 325, 374, 479
MboI GATC 4 cut(s) 3, 323, 372, 477
MboII GAAGA 3 cut(s) 153, 223, 425
MhlI GDGCHC 2 cut(s) 384, 675
MlsI TGGCCA 1 cut(s) 555
MluCI AATT 6 cut(s) 46, 51, 57, 114, 564, 622
MluNI TGGCCA 1 cut(s) 555
Mly113I GGCGCC 1 cut(s) 258
MnlI CCTC 7 cut(s) 201, 283, 288, 331, 493, 600, 760
Mox20I TGGCCA 1 cut(s) 555
MscI TGGCCA 1 cut(s) 555
MseI TTAA 5 cut(s) 50, 54, 633, 642, 774
MslI CAYNNNNRTG 1 cut(s) 21
Msp20I TGGCCA 1 cut(s) 555
MspA1I CMGCKG 1 cut(s) 104
MspCI CTTAAG 1 cut(s) 632
MspI CCGG 2 cut(s) 358, 747
MspR9I CCNGG 4 cut(s) 331, 358, 359, 748
MvaI CCWGG 1 cut(s) 331
MvnI CGCG 1 cut(s) 81
MwoI GCNNNNNNNGC 2 cut(s) 725, 734
NarI GGCGCC 1 cut(s) 258
NciI CCSGG 3 cut(s) 358, 359, 748
NdeI CATATG 2 cut(s) 667, 753
NdeII GATC 4 cut(s) 3, 323, 372, 477
NlaIII CATG 2 cut(s) 401, 475
NlaIV GGNNCC 3 cut(s) 259, 351, 504
NmeAIII GCCGAG 1 cut(s) 790
NspV TTCGAA 2 cut(s) 118, 569
PacI TTAATTAA 1 cut(s) 54
PaqCI CACCTGC 1 cut(s) 538
PfeI GAWTC 2 cut(s) 285, 811
PkrI GCNGC 2 cut(s) 257, 579
Ple19I CGATCG 1 cut(s) 326
PluTI GGCGCC 1 cut(s) 261
PpuMI RGGWCCY 1 cut(s) 439
Psp124BI GAGCTC 1 cut(s) 384
Psp5II RGGWCCY 1 cut(s) 439
Psp6I CCWGG 1 cut(s) 329
PspGI CCWGG 1 cut(s) 329
PspN4I GGNNCC 3 cut(s) 259, 351, 504
PspPI GGNCC 4 cut(s) 34, 349, 439, 502
PspPPI RGGWCCY 1 cut(s) 439
PstI CTGCAG 1 cut(s) 739
PvuI CGATCG 1 cut(s) 326
RsaI GTAC 1 cut(s) 741
RsaNI GTAC 1 cut(s) 740
RseI CAYNNNNRTG 1 cut(s) 21
SacI GAGCTC 1 cut(s) 384
SaqAI TTAA 5 cut(s) 50, 54, 633, 642, 774
SatI GCNGC 2 cut(s) 256, 578
Sau3AI GATC 4 cut(s) 3, 323, 372, 477
Sau96I GGNCC 4 cut(s) 34, 349, 439, 502
ScrFI CCNGG 4 cut(s) 331, 358, 359, 748
SduI GDGCHC 2 cut(s) 384, 675
SexAI ACCWGGT 1 cut(s) 329
SfaNI GCATC 1 cut(s) 448
SfcI CTRYAG 1 cut(s) 735
SfoI GGCGCC 1 cut(s) 259
SfuI TTCGAA 2 cut(s) 118, 569
SinI GGWCC 3 cut(s) 34, 349, 439
SmaI CCCGGG 1 cut(s) 359
SmiMI CAYNNNNRTG 1 cut(s) 21
SmlI CTYRAG 1 cut(s) 632
SmoI CTYRAG 1 cut(s) 632
Sse9I AATT 6 cut(s) 46, 51, 57, 114, 564, 622
SsiI CCGC 6 cut(s) 104, 136, 184, 255, 354, 577
SspDI GGCGCC 1 cut(s) 257
SspI AATATT 1 cut(s) 601
SspMI CTAG 2 cut(s) 267, 789
SstI GAGCTC 1 cut(s) 384
StyD4I CCNGG 4 cut(s) 329, 356, 357, 746
TaaI ACNGT 1 cut(s) 712
TaqI TCGA 6 cut(s) 118, 288, 326, 336, 480, 569
TasI AATT 6 cut(s) 46, 51, 57, 114, 564, 622
TatI WGTACW 1 cut(s) 739
TauI GCSGC 2 cut(s) 258, 580
TfiI GAWTC 2 cut(s) 285, 811
Tru1I TTAA 5 cut(s) 50, 54, 633, 642, 774
Tru9I TTAA 5 cut(s) 50, 54, 633, 642, 774
TscAI CASTG 2 cut(s) 454, 765
TspDTI ATGAA 2 cut(s) 414, 668
TspMI CCCGGG 1 cut(s) 357
TspRI CASTG 2 cut(s) 454, 765
Vha464I CTTAAG 1 cut(s) 632
VpaK11BI GGWCC 3 cut(s) 34, 349, 439
XapI RAATTY 2 cut(s) 114, 622
XmaI CCCGGG 1 cut(s) 357
XspI CTAG 2 cut(s) 267, 789
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.