pycom16g09550

Protein of unknown function (DUF3537)

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr16
N/A
Physical Location & Seq
Reverse (-)
6376671 .. 6377018
348 bp
Loading structure...
UTR
Exon/CDS
Intron
N/A

Sequence Viewer

Length: 348 bp
ATGGCCCAACATGGAGCTTTGTTCCATGTTGGTGAAGGTTTCGTTTATCAGCTTGGTAGCGGACACTTCGATTCCAATGTCTCAGACTTCGCCGTGCATTTCAAAGCCGAAATTTTGTGTCATGTATGGTTTTCTATGTACATTATCTCTTCACTTCCATTGGTTTTCAATTGTCTCAAGATTTTCCCTTTGTTCTCCAATGCAGTGTCATACTTGCAAACCAATCATGGGGGGATCACAATTTTTGGATGGACAGTCGACAGAGCCCTCCTCAACACAATTTTCTTCATTGAACTGTCTCTGATCACCTTTGTTCTTGGAAAGACATTAGTTTTCACGTCGACTTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

116

Amino Acids

12.87

Weight (kDa)

6.25

Isoelectric Point (pI)

21.68

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
DUF3537 PF12056 69 - 97 1.1e-11 Protein of unknown function (DUF3537)
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

Orthologous Genes

No orthologs found for this gene in the current database.

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccI GTMKAC 2 cut(s) 258, 341
AciI CCGC 1 cut(s) 60
AclWI GGATC 1 cut(s) 242
AcsI RAATTY 1 cut(s) 111
AfaI GTAC 1 cut(s) 140
AfiI CCNNNNNNNGG 1 cut(s) 228
AgsI TTSAA 3 cut(s) 103, 169, 293
AjiI CACGTC 1 cut(s) 339
AluBI AGCT 2 cut(s) 17, 52
AluI AGCT 2 cut(s) 17, 52
Alw26I GTCTC 3 cut(s) 85, 179, 303
AlwI GGATC 1 cut(s) 242
AoxI GGCC 1 cut(s) 3
ApoI RAATTY 1 cut(s) 111
AspS9I GGNCC 1 cut(s) 4
AsuHPI GGTGA 2 cut(s) 44, 298
BanII GRGCYC 1 cut(s) 268
BccI CCATC 1 cut(s) 243
BceAI ACGGC 1 cut(s) 77
BclI TGATCA 1 cut(s) 303
BcoDI GTCTC 3 cut(s) 85, 179, 303
BmgBI CACGTC 1 cut(s) 339
BmgT120I GGNCC 1 cut(s) 4
BplI GAGNNNNNCTC 2 cut(s) 255, 287
BpuEI CTTGAG 1 cut(s) 161
Bsc4I CCNNNNNNNGG 1 cut(s) 228
BseGI GGATG 1 cut(s) 254
BseLI CCNNNNNNNGG 1 cut(s) 228
BseMII CTCAG 1 cut(s) 96
BseRI GAGGAG 1 cut(s) 260
BshFI GGCC 1 cut(s) 5
BslI CCNNNNNNNGG 1 cut(s) 228
BsmAI GTCTC 3 cut(s) 85, 179, 303
BsnI GGCC 1 cut(s) 5
Bsp1286I GDGCHC 1 cut(s) 268
Bsp1407I TGTACA 1 cut(s) 138
Bsp143I GATC 2 cut(s) 234, 303
BspACI CCGC 1 cut(s) 60
BspANI GGCC 1 cut(s) 5
BspCNI CTCAG 1 cut(s) 95
BspPI GGATC 1 cut(s) 242
BsrGI TGTACA 1 cut(s) 138
BssMI GATC 2 cut(s) 234, 303
Bst4CI ACNGT 2 cut(s) 256, 297
Bst6I CTCTTC 1 cut(s) 154
BstAUI TGTACA 1 cut(s) 138
BstDEI CTNAG 1 cut(s) 82
BstF5I GGATG 1 cut(s) 254
BstKTI GATC 2 cut(s) 237, 306
BstMAI GTCTC 3 cut(s) 85, 179, 303
BstMBI GATC 2 cut(s) 234, 303
BsuRI GGCC 1 cut(s) 5
BtrI CACGTC 1 cut(s) 339
BtsCI GGATG 1 cut(s) 254
BtsI GCAGTG 1 cut(s) 210
BtsIMutI CAGTG 1 cut(s) 210
Cfr13I GGNCC 1 cut(s) 4
Csp6I GTAC 1 cut(s) 139
CviAII CATG 4 cut(s) 11, 26, 122, 227
CviJI RGCY 5 cut(s) 5, 17, 52, 107, 266
CviKI_1 RGCY 5 cut(s) 5, 17, 52, 107, 266
CviQI GTAC 1 cut(s) 139
DdeI CTNAG 1 cut(s) 82
DpnI GATC 2 cut(s) 236, 305
DpnII GATC 2 cut(s) 234, 303
Eam1104I CTCTTC 1 cut(s) 154
EarI CTCTTC 1 cut(s) 154
Eco24I GRGCYC 1 cut(s) 268
EcoT38I GRGCYC 1 cut(s) 268
FaeI CATG 4 cut(s) 14, 29, 125, 230
FaiI YATR 7 cut(s) 12, 27, 123, 127, 137, 211, 228
FatI CATG 4 cut(s) 10, 25, 121, 226
FbaI TGATCA 1 cut(s) 303
FblI GTMKAC 2 cut(s) 258, 341
FokI GGATG 1 cut(s) 261
FriOI GRGCYC 1 cut(s) 268
HaeIII GGCC 1 cut(s) 5
Hin1II CATG 4 cut(s) 14, 29, 125, 230
HincII GTYRAC 2 cut(s) 259, 342
HindII GTYRAC 2 cut(s) 259, 342
HinfI GANTC 1 cut(s) 71
HphI GGTGA 2 cut(s) 44, 298
Hpy166II GTNNAC 2 cut(s) 259, 342
Hpy188I TCNGA 2 cut(s) 85, 303
Hpy188III TCNNGA 1 cut(s) 178
Hpy8I GTNNAC 2 cut(s) 259, 342
Hpy99I CGWCG 1 cut(s) 343
HpyAV CCTTC 1 cut(s) 29
HpyCH4III ACNGT 2 cut(s) 256, 297
HpyCH4IV ACGT 1 cut(s) 338
HpyCH4V TGCA 3 cut(s) 97, 203, 217
HpyF3I CTNAG 1 cut(s) 82
HpySE526I ACGT 1 cut(s) 338
Hsp92II CATG 4 cut(s) 14, 29, 125, 230
Ksp22I TGATCA 1 cut(s) 303
Kzo9I GATC 2 cut(s) 234, 303
LmnI GCTCC 1 cut(s) 14
MaeII ACGT 1 cut(s) 338
MalI GATC 2 cut(s) 236, 305
MboI GATC 2 cut(s) 234, 303
MboII GAAGA 2 cut(s) 141, 277
MfeI CAATTG 1 cut(s) 169
MhlI GDGCHC 1 cut(s) 268
MluCI AATT 4 cut(s) 111, 169, 240, 279
MnlI CCTC 2 cut(s) 278, 281
MslI CAYNNNNRTG 1 cut(s) 30
MunI CAATTG 1 cut(s) 169
NdeII GATC 2 cut(s) 234, 303
NlaIII CATG 4 cut(s) 14, 29, 125, 230
PfeI GAWTC 1 cut(s) 71
PspPI GGNCC 1 cut(s) 4
RsaI GTAC 1 cut(s) 140
RsaNI GTAC 1 cut(s) 139
RseI CAYNNNNRTG 1 cut(s) 30
SalI GTCGAC 2 cut(s) 257, 340
Sau3AI GATC 2 cut(s) 234, 303
Sau96I GGNCC 1 cut(s) 4
SduI GDGCHC 1 cut(s) 268
SetI ASST 5 cut(s) 19, 40, 54, 311, 341
SgeI CNNG 9 cut(s) 23, 38, 65, 106, 134, 190, 226, 239, 329
SmiMI CAYNNNNRTG 1 cut(s) 30
SmlI CTYRAG 1 cut(s) 176
SmoI CTYRAG 1 cut(s) 176
Sse9I AATT 4 cut(s) 111, 169, 240, 279
SsiI CCGC 1 cut(s) 60
TaaI ACNGT 2 cut(s) 256, 297
TaiI ACGT 1 cut(s) 341
TaqI TCGA 3 cut(s) 69, 258, 341
TasI AATT 4 cut(s) 111, 169, 240, 279
TatI WGTACW 1 cut(s) 138
TfiI GAWTC 1 cut(s) 71
TscAI CASTG 1 cut(s) 210
TspDTI ATGAA 1 cut(s) 277
TspRI CASTG 1 cut(s) 210
XapI RAATTY 1 cut(s) 111
XmiI GTMKAC 2 cut(s) 258, 341
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.