ATP-citrate synthase alpha chain protein
| Domain Name | Pfam ID | Position | E-value | Description |
|---|---|---|---|---|
| Citrate_synth_N | PF24948 | 80 - 172 | 2.5e-26 | ATP-citrate synthase ATP-grasp domain |
| ATP-grasp_2 | PF08442 | 84 - 174 | 1.8e-06 | ATP-grasp domain |
| Citrate_synth_N | PF24948 | 173 - 254 | 5e-17 | ATP-citrate synthase ATP-grasp domain |
| Citrate_bind | PF16114 | 265 - 350 | 1.3e-40 | ATP citrate lyase citrate-binding |
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No orthologs found for this gene in the current database.
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AarI | CACCTGC | 1 cut(s) | 111 |
| Acc16I | TGCGCA | 1 cut(s) | 114 |
| Acc36I | ACCTGC | 2 cut(s) | 111, 463 |
| AccB7I | CCANNNNNTGG | 1 cut(s) | 646 |
| AccBSI | CCGCTC | 1 cut(s) | 441 |
| AccI | GTMKAC | 1 cut(s) | 389 |
| AccII | CGCG | 3 cut(s) | 55, 394, 432 |
| AciI | CCGC | 5 cut(s) | 98, 159, 394, 432, 441 |
| AclI | AACGTT | 1 cut(s) | 815 |
| AclWI | GGATC | 1 cut(s) | 209 |
| AcsI | RAATTY | 1 cut(s) | 857 |
| AcuI | CTGAAG | 1 cut(s) | 942 |
| AcvI | CACGTG | 1 cut(s) | 35 |
| AcyI | GRCGYC | 1 cut(s) | 205 |
| AfaI | GTAC | 1 cut(s) | 84 |
| AfiI | CCNNNNNNNGG | 2 cut(s) | 460, 646 |
| AflII | CTTAAG | 1 cut(s) | 799 |
| AflIII | ACRYGT | 1 cut(s) | 53 |
| AgsI | TTSAA | 3 cut(s) | 745, 754, 871 |
| AjnI | CCWGG | 2 cut(s) | 639, 660 |
| AleI | CACNNNNGTG | 1 cut(s) | 56 |
| AluBI | AGCT | 6 cut(s) | 329, 373, 724, 902, 992, 1049 |
| AluI | AGCT | 6 cut(s) | 329, 373, 724, 902, 992, 1049 |
| Alw21I | GWGCWC | 2 cut(s) | 565, 994 |
| Alw26I | GTCTC | 1 cut(s) | 591 |
| AlwI | GGATC | 1 cut(s) | 209 |
| AlwNI | CAGNNNCTG | 1 cut(s) | 289 |
| AoxI | GGCC | 2 cut(s) | 237, 442 |
| ApeKI | GCWGC | 5 cut(s) | 274, 283, 373, 493, 737 |
| ApoI | RAATTY | 1 cut(s) | 857 |
| ArsI | GACNNNNNNTTYG | 2 cut(s) | 404, 436 |
| AspLEI | GCGC | 4 cut(s) | 115, 432, 472, 848 |
| AspS9I | GGNCC | 2 cut(s) | 238, 891 |
| AsuC2I | CCSGG | 1 cut(s) | 241 |
| AsuHPI | GGTGA | 5 cut(s) | 292, 346, 346, 415, 704 |
| AvaII | GGWCC | 1 cut(s) | 891 |
| BanII | GRGCYC | 1 cut(s) | 994 |
| BbrPI | CACGTG | 1 cut(s) | 35 |
| Bbv12I | GWGCWC | 2 cut(s) | 565, 994 |
| BbvI | GCAGC | 5 cut(s) | 261, 295, 360, 505, 724 |
| BccI | CCATC | 1 cut(s) | 1053 |
| BcgI | CGANNNNNNTGC | 2 cut(s) | 355, 389 |
| BciT130I | CCWGG | 2 cut(s) | 641, 662 |
| BciVI | GTATCC | 1 cut(s) | 206 |
| BcnI | CCSGG | 1 cut(s) | 241 |
| BcoDI | GTCTC | 1 cut(s) | 591 |
| BfmI | CTRYAG | 1 cut(s) | 807 |
| BfrI | CTTAAG | 1 cut(s) | 799 |
| BfuAI | ACCTGC | 2 cut(s) | 111, 463 |
| BfuI | GTATCC | 1 cut(s) | 206 |
| BisI | GCNGC | 8 cut(s) | 98, 275, 284, 374, 395, 442, 494, 738 |
| BlsI | GCNGC | 8 cut(s) | 99, 276, 285, 375, 396, 443, 495, 739 |
| Bme1390I | CCNGG | 3 cut(s) | 241, 641, 662 |
| Bme18I | GGWCC | 1 cut(s) | 891 |
| BmgT120I | GGNCC | 2 cut(s) | 238, 891 |
| BmrFI | CCNGG | 3 cut(s) | 241, 641, 662 |
| BmsI | GCATC | 2 cut(s) | 857, 894 |
| BpmI | CTGGAG | 2 cut(s) | 299, 924 |
| Bpu10I | CCTNAGC | 1 cut(s) | 330 |
| BpuEI | CTTGAG | 1 cut(s) | 263 |
| BpuMI | CCSGG | 1 cut(s) | 241 |
| BsaAI | YACGTR | 1 cut(s) | 35 |
| BsaHI | GRCGYC | 1 cut(s) | 205 |
| BsaJI | CCNNGG | 3 cut(s) | 377, 681, 894 |
| BsaWI | WCCGGW | 1 cut(s) | 302 |
| Bsc4I | CCNNNNNNNGG | 2 cut(s) | 460, 646 |
| Bse3DI | GCAATG | 1 cut(s) | 772 |
| BseBI | CCWGG | 2 cut(s) | 641, 662 |
| BseDI | CCNNGG | 3 cut(s) | 377, 681, 894 |
| BseGI | GGATG | 3 cut(s) | 733, 838, 848 |
| BseLI | CCNNNNNNNGG | 2 cut(s) | 460, 646 |
| BseMI | GCAATG | 1 cut(s) | 772 |
| BseMII | CTCAG | 2 cut(s) | 339, 344 |
| BseXI | GCAGC | 5 cut(s) | 261, 295, 360, 505, 724 |
| Bsh1236I | CGCG | 3 cut(s) | 55, 394, 432 |
| Bsh1285I | CGRYCG | 1 cut(s) | 534 |
| BshFI | GGCC | 2 cut(s) | 239, 444 |
| BsiEI | CGRYCG | 1 cut(s) | 534 |
| BsiHKAI | GWGCWC | 2 cut(s) | 565, 994 |
| BsiSI | CCGG | 3 cut(s) | 199, 241, 303 |
| BslI | CCNNNNNNNGG | 2 cut(s) | 460, 646 |
| BsmAI | GTCTC | 1 cut(s) | 591 |
| BsnI | GGCC | 2 cut(s) | 239, 444 |
| Bsp1286I | GDGCHC | 2 cut(s) | 565, 994 |
| Bsp1407I | TGTACA | 1 cut(s) | 82 |
| Bsp143I | GATC | 4 cut(s) | 214, 249, 318, 1051 |
| Bsp19I | CCATGG | 2 cut(s) | 377, 894 |
| BspACI | CCGC | 5 cut(s) | 98, 159, 394, 432, 441 |
| BspANI | GGCC | 2 cut(s) | 239, 444 |
| BspCNI | CTCAG | 3 cut(s) | 338, 343, 1068 |
| BspFNI | CGCG | 3 cut(s) | 55, 394, 432 |
| BspMI | ACCTGC | 2 cut(s) | 111, 463 |
| BspPI | GGATC | 1 cut(s) | 209 |
| BspTI | CTTAAG | 1 cut(s) | 799 |
| BsrBI | CCGCTC | 1 cut(s) | 441 |
| BsrDI | GCAATG | 1 cut(s) | 772 |
| BsrGI | TGTACA | 1 cut(s) | 82 |
| BssECI | CCNNGG | 3 cut(s) | 377, 681, 894 |
| BssMI | GATC | 4 cut(s) | 214, 249, 318, 1051 |
| BssNI | GRCGYC | 1 cut(s) | 205 |
| BssT1I | CCWWGG | 3 cut(s) | 377, 681, 894 |
| Bst2UI | CCWGG | 2 cut(s) | 641, 662 |
| Bst4CI | ACNGT | 4 cut(s) | 82, 692, 865, 937 |
| Bst6I | CTCTTC | 2 cut(s) | 585, 999 |
| BstACI | GRCGYC | 1 cut(s) | 205 |
| BstAFI | CTTAAG | 1 cut(s) | 799 |
| BstAUI | TGTACA | 1 cut(s) | 82 |
| BstBAI | YACGTR | 1 cut(s) | 35 |
| BstC8I | GCNNGC | 1 cut(s) | 209 |
| BstDEI | CTNAG | 3 cut(s) | 325, 330, 1055 |
| BstDSI | CCRYGG | 2 cut(s) | 377, 894 |
| BstEII | GGTNACC | 1 cut(s) | 334 |
| BstF5I | GGATG | 3 cut(s) | 733, 838, 848 |
| BstFNI | CGCG | 3 cut(s) | 55, 394, 432 |
| BstHHI | GCGC | 4 cut(s) | 115, 432, 472, 848 |
| BstKTI | GATC | 4 cut(s) | 217, 252, 321, 1054 |
| BstMAI | GTCTC | 1 cut(s) | 591 |
| BstMBI | GATC | 4 cut(s) | 214, 249, 318, 1051 |
| BstMCI | CGRYCG | 1 cut(s) | 534 |
| BstMWI | GCNNNNNNNGC | 9 cut(s) | 103, 112, 208, 280, 283, 379, 415, 438, 476 |
| BstNI | CCWGG | 2 cut(s) | 641, 662 |
| BstNSI | RCATGY | 1 cut(s) | 418 |
| BstPI | GGTNACC | 1 cut(s) | 334 |
| BstSCI | CCNGG | 3 cut(s) | 239, 639, 660 |
| BstSFI | CTRYAG | 1 cut(s) | 807 |
| BstUI | CGCG | 3 cut(s) | 55, 394, 432 |
| BstV1I | GCAGC | 5 cut(s) | 261, 295, 360, 505, 724 |
| BsuI | GTATCC | 1 cut(s) | 206 |
| BsuRI | GGCC | 2 cut(s) | 239, 444 |
| BtgI | CCRYGG | 2 cut(s) | 377, 894 |
| BtsCI | GGATG | 3 cut(s) | 733, 838, 848 |
| BtsI | GCAGTG | 2 cut(s) | 732, 779 |
| BtsIMutI | CAGTG | 3 cut(s) | 732, 779, 861 |
| BveI | ACCTGC | 2 cut(s) | 111, 463 |
| Cac8I | GCNNGC | 1 cut(s) | 209 |
| CaiI | CAGNNNCTG | 1 cut(s) | 289 |
| CfoI | GCGC | 4 cut(s) | 115, 432, 472, 848 |
| Cfr13I | GGNCC | 2 cut(s) | 238, 891 |
| CseI | GACGC | 4 cut(s) | 213, 400, 563, 891 |
| Csp6I | GTAC | 1 cut(s) | 83 |
| CspCI | CAANNNNNGTGG | 2 cut(s) | 1011, 1046 |
| CviAII | CATG | 5 cut(s) | 378, 415, 466, 759, 895 |
| CviQI | GTAC | 1 cut(s) | 83 |
| DdeI | CTNAG | 3 cut(s) | 325, 330, 1055 |
| DpnI | GATC | 4 cut(s) | 216, 251, 320, 1053 |
| DpnII | GATC | 4 cut(s) | 214, 249, 318, 1051 |
| Eam1104I | CTCTTC | 2 cut(s) | 585, 999 |
| EarI | CTCTTC | 2 cut(s) | 585, 999 |
| Ecl136II | GAGCTC | 1 cut(s) | 992 |
| Eco130I | CCWWGG | 3 cut(s) | 377, 681, 894 |
| Eco24I | GRGCYC | 1 cut(s) | 994 |
| Eco47I | GGWCC | 1 cut(s) | 891 |
| Eco53kI | GAGCTC | 1 cut(s) | 992 |
| Eco57I | CTGAAG | 1 cut(s) | 942 |
| Eco72I | CACGTG | 1 cut(s) | 35 |
| Eco91I | GGTNACC | 1 cut(s) | 334 |
| EcoICRI | GAGCTC | 1 cut(s) | 992 |
| EcoO65I | GGTNACC | 1 cut(s) | 334 |
| EcoRII | CCWGG | 2 cut(s) | 639, 660 |
| EcoT14I | CCWWGG | 3 cut(s) | 377, 681, 894 |
| EcoT38I | GRGCYC | 1 cut(s) | 994 |
| ErhI | CCWWGG | 3 cut(s) | 377, 681, 894 |
| FaeI | CATG | 5 cut(s) | 381, 418, 469, 762, 898 |
| FatI | CATG | 5 cut(s) | 377, 414, 465, 758, 894 |
| FblI | GTMKAC | 1 cut(s) | 389 |
| Fnu4HI | GCNGC | 8 cut(s) | 98, 275, 284, 374, 395, 442, 494, 738 |
| FokI | GGATG | 3 cut(s) | 740, 835, 845 |
| FriOI | GRGCYC | 1 cut(s) | 994 |
| Fsp4HI | GCNGC | 8 cut(s) | 98, 275, 284, 374, 395, 442, 494, 738 |
| FspI | TGCGCA | 1 cut(s) | 114 |
| GlaI | GCGC | 4 cut(s) | 114, 431, 471, 847 |
| GluI | GCNGC | 8 cut(s) | 98, 275, 284, 374, 395, 442, 494, 738 |
| GsuI | CTGGAG | 2 cut(s) | 299, 924 |
| HaeIII | GGCC | 2 cut(s) | 239, 444 |
| HapII | CCGG | 3 cut(s) | 199, 241, 303 |
| HgaI | GACGC | 4 cut(s) | 213, 400, 563, 891 |
| HhaI | GCGC | 4 cut(s) | 115, 432, 472, 848 |
| Hin1I | GRCGYC | 1 cut(s) | 205 |
| Hin1II | CATG | 5 cut(s) | 381, 418, 469, 762, 898 |
| Hin6I | GCGC | 4 cut(s) | 113, 430, 470, 846 |
| HinP1I | GCGC | 4 cut(s) | 113, 430, 470, 846 |
| HincII | GTYRAC | 3 cut(s) | 345, 390, 688 |
| HindII | GTYRAC | 3 cut(s) | 345, 390, 688 |
| HinfI | GANTC | 6 cut(s) | 263, 297, 306, 341, 498, 795 |
| HpaII | CCGG | 3 cut(s) | 199, 241, 303 |
| HphI | GGTGA | 5 cut(s) | 292, 346, 346, 415, 704 |
| Hpy166II | GTNNAC | 5 cut(s) | 85, 345, 390, 688, 695 |
| Hpy188I | TCNGA | 8 cut(s) | 219, 229, 254, 425, 531, 596, 961, 1058 |
| Hpy188III | TCNNGA | 4 cut(s) | 316, 745, 830, 889 |
| Hpy8I | GTNNAC | 5 cut(s) | 85, 345, 390, 688, 695 |
| Hpy99I | CGWCG | 4 cut(s) | 207, 391, 394, 452 |
| HpyAV | CCTTC | 1 cut(s) | 751 |
| HpyCH4III | ACNGT | 4 cut(s) | 82, 692, 865, 937 |
| HpyCH4IV | ACGT | 2 cut(s) | 34, 815 |
| HpyCH4V | TGCA | 5 cut(s) | 914, 977, 1015, 1022, 1043 |
| HpyF10VI | GCNNNNNNNGC | 9 cut(s) | 103, 112, 208, 280, 283, 379, 415, 438, 476 |
| HpyF3I | CTNAG | 3 cut(s) | 325, 330, 1055 |
| HpySE526I | ACGT | 2 cut(s) | 34, 815 |
| Hsp92I | GRCGYC | 1 cut(s) | 205 |
| Hsp92II | CATG | 5 cut(s) | 381, 418, 469, 762, 898 |
| HspAI | GCGC | 4 cut(s) | 113, 430, 470, 846 |
| Kzo9I | GATC | 4 cut(s) | 214, 249, 318, 1051 |
| LmnI | GCTCC | 4 cut(s) | 568, 721, 989, 997 |
| Lsp1109I | GCAGC | 5 cut(s) | 261, 295, 360, 505, 724 |
| LweI | GCATC | 2 cut(s) | 857, 894 |
| MaeII | ACGT | 2 cut(s) | 34, 815 |
| MaeIII | GTNAC | 2 cut(s) | 58, 334 |
| MalI | GATC | 4 cut(s) | 216, 251, 320, 1053 |
| MbiI | CCGCTC | 1 cut(s) | 441 |
| MboI | GATC | 4 cut(s) | 214, 249, 318, 1051 |
| MboII | GAAGA | 5 cut(s) | 256, 259, 518, 572, 1016 |
| MhlI | GDGCHC | 2 cut(s) | 565, 994 |
| MluCI | AATT | 3 cut(s) | 603, 857, 970 |
| MluI | ACGCGT | 1 cut(s) | 53 |
| MlyI | GAGTC | 5 cut(s) | 257, 291, 350, 492, 804 |
| MmeI | TCCRAC | 4 cut(s) | 101, 252, 554, 919 |
| MnlI | CCTC | 9 cut(s) | 264, 323, 455, 502, 583, 708, 899, 994, 1000 |
| MseI | TTAA | 3 cut(s) | 513, 800, 854 |
| MslI | CAYNNNNRTG | 1 cut(s) | 56 |
| MspA1I | CMGCKG | 1 cut(s) | 1049 |
| MspCI | CTTAAG | 1 cut(s) | 799 |
| MspI | CCGG | 3 cut(s) | 199, 241, 303 |
| MspR9I | CCNGG | 3 cut(s) | 241, 641, 662 |
| MvaI | CCWGG | 2 cut(s) | 641, 662 |
| MvnI | CGCG | 3 cut(s) | 55, 394, 432 |
| MwoI | GCNNNNNNNGC | 9 cut(s) | 103, 112, 208, 280, 283, 379, 415, 438, 476 |
| NciI | CCSGG | 1 cut(s) | 241 |
| NcoI | CCATGG | 2 cut(s) | 377, 894 |
| NdeII | GATC | 4 cut(s) | 214, 249, 318, 1051 |
| NlaIII | CATG | 5 cut(s) | 381, 418, 469, 762, 898 |
| NmeAIII | GCCGAG | 1 cut(s) | 505 |
| NmuCI | GTSAC | 2 cut(s) | 58, 334 |
| NsbI | TGCGCA | 1 cut(s) | 114 |
| NspI | RCATGY | 1 cut(s) | 418 |
| OliI | CACNNNNGTG | 1 cut(s) | 56 |
| PaqCI | CACCTGC | 1 cut(s) | 111 |
| PcsI | WCGNNNNNNNCGW | 2 cut(s) | 199, 483 |
| PfeI | GAWTC | 1 cut(s) | 306 |
| PflFI | GACNNNGTC | 1 cut(s) | 340 |
| PflMI | CCANNNNNTGG | 1 cut(s) | 646 |
| PfoI | TCCNGGA | 2 cut(s) | 639, 660 |
| PkrI | GCNGC | 8 cut(s) | 99, 276, 285, 375, 396, 443, 495, 739 |
| PleI | GAGTC | 5 cut(s) | 257, 291, 349, 492, 803 |
| PmaCI | CACGTG | 1 cut(s) | 35 |
| PmlI | CACGTG | 1 cut(s) | 35 |
| PpsI | GAGTC | 5 cut(s) | 257, 291, 349, 492, 803 |
| Ppu21I | YACGTR | 1 cut(s) | 35 |
| Psp124BI | GAGCTC | 1 cut(s) | 994 |
| Psp1406I | AACGTT | 1 cut(s) | 815 |
| Psp6I | CCWGG | 2 cut(s) | 639, 660 |
| PspCI | CACGTG | 1 cut(s) | 35 |
| PspEI | GGTNACC | 1 cut(s) | 334 |
| PspGI | CCWGG | 2 cut(s) | 639, 660 |
| PspPI | GGNCC | 2 cut(s) | 238, 891 |
| PstNI | CAGNNNCTG | 1 cut(s) | 289 |
| PsyI | GACNNNGTC | 1 cut(s) | 340 |
| PvuII | CAGCTG | 1 cut(s) | 1049 |
| RsaI | GTAC | 1 cut(s) | 84 |
| RsaNI | GTAC | 1 cut(s) | 83 |
| RseI | CAYNNNNRTG | 1 cut(s) | 56 |
| SacI | GAGCTC | 1 cut(s) | 994 |
| SalI | GTCGAC | 1 cut(s) | 388 |
| SaqAI | TTAA | 3 cut(s) | 513, 800, 854 |
| SatI | GCNGC | 8 cut(s) | 98, 275, 284, 374, 395, 442, 494, 738 |
| Sau3AI | GATC | 4 cut(s) | 214, 249, 318, 1051 |
| Sau96I | GGNCC | 2 cut(s) | 238, 891 |
| SchI | GAGTC | 5 cut(s) | 257, 291, 350, 492, 804 |
| ScrFI | CCNGG | 3 cut(s) | 241, 641, 662 |
| SduI | GDGCHC | 2 cut(s) | 565, 994 |
| SfaNI | GCATC | 2 cut(s) | 857, 894 |
| SfcI | CTRYAG | 1 cut(s) | 807 |
| SgrDI | CGTCGACG | 1 cut(s) | 388 |
| SinI | GGWCC | 1 cut(s) | 891 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 56 |
| SmlI | CTYRAG | 2 cut(s) | 278, 799 |
| SmoI | CTYRAG | 2 cut(s) | 278, 799 |
| Sse9I | AATT | 3 cut(s) | 603, 857, 970 |
| SsiI | CCGC | 5 cut(s) | 98, 159, 394, 432, 441 |
| SstI | GAGCTC | 1 cut(s) | 994 |
| StyD4I | CCNGG | 3 cut(s) | 239, 639, 660 |
| StyI | CCWWGG | 3 cut(s) | 377, 681, 894 |
| TaaI | ACNGT | 4 cut(s) | 82, 692, 865, 937 |
| TaiI | ACGT | 2 cut(s) | 37, 818 |
| TaqI | TCGA | 3 cut(s) | 309, 389, 1035 |
| TaqII | GACCGA | 2 cut(s) | 353, 548 |
| TasI | AATT | 3 cut(s) | 603, 857, 970 |
| TatI | WGTACW | 1 cut(s) | 82 |
| TauI | GCSGC | 3 cut(s) | 100, 397, 444 |
| TfiI | GAWTC | 1 cut(s) | 306 |
| Tru1I | TTAA | 3 cut(s) | 513, 800, 854 |
| Tru9I | TTAA | 3 cut(s) | 513, 800, 854 |
| TscAI | CASTG | 3 cut(s) | 739, 786, 868 |
| TseFI | GTSAC | 2 cut(s) | 58, 334 |
| TseI | GCWGC | 5 cut(s) | 274, 283, 373, 493, 737 |
| Tsp45I | GTSAC | 2 cut(s) | 58, 334 |
| TspDTI | ATGAA | 4 cut(s) | 604, 683, 812, 849 |
| TspGWI | ACGGA | 1 cut(s) | 362 |
| TspRI | CASTG | 3 cut(s) | 739, 786, 868 |
| Tth111I | GACNNNGTC | 1 cut(s) | 340 |
| Van91I | CCANNNNNTGG | 1 cut(s) | 646 |
| Vha464I | CTTAAG | 1 cut(s) | 799 |
| VpaK11BI | GGWCC | 1 cut(s) | 891 |
| XapI | RAATTY | 1 cut(s) | 857 |
| XceI | RCATGY | 1 cut(s) | 418 |
| XcmI | CCANNNNNNNNNTGG | 1 cut(s) | 583 |
| XmiI | GTMKAC | 1 cut(s) | 389 |