pycom16g14940

inosine-uridine preferring nucleoside hydrolase

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr16
N/A
Physical Location & Seq
Forward (+)
10947975 .. 10949467
1493 bp
Loading structure...
UTR
Exon/CDS
Intron
N/A

Sequence Viewer

Length: 342 bp
ATGTTGTGGCAGAAGAAGCAGCGTTTTAATTGGGTAGTGCAGATGCTAGTTGCTGTGGGATTAGTACTAGTTGTGATTGGAGCTGGTAATTTGCAGACTGTGGAAGGAAGGCCTCACAGGATTCTTGTCGATACAGATGTCGATACCGATGATTTCTTTGCTCTCTTGTACCTCTTGAAGCTTAACAGATCAGAGTTTGAGTTGGAGAGGACTACAACAGCAGGAGGATGCAGATATAGACAAGCCATTCCTGTAGGTGCTGGAGGTCGATTGGATATTGATTCTAATTTTGGCCTCAGAAAATCATTTCTCCCCCAGGTAAAAATAATGTACACACAGTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
Pfam Domains
Protein Families

Protein Analysis

114

Amino Acids

12.83

Weight (kDa)

9.3

Isoelectric Point (pI)

20.74

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes

No orthologs found for this gene in the current database.

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AfaI GTAC 3 cut(s) 66, 170, 332
AgsI TTSAA 1 cut(s) 178
AhlI ACTAGT 1 cut(s) 67
AjnI CCWGG 1 cut(s) 315
AluBI AGCT 2 cut(s) 83, 181
AluI AGCT 2 cut(s) 83, 181
AoxI GGCC 2 cut(s) 110, 292
ApeKI GCWGC 1 cut(s) 19
BaeI ACNNNNGTAYC 2 cut(s) 123, 156
BbvI GCAGC 1 cut(s) 31
BciT130I CCWGG 1 cut(s) 317
BcuI ACTAGT 1 cut(s) 67
BfaI CTAG 2 cut(s) 47, 68
BfmI CTRYAG 1 cut(s) 252
BisI GCNGC 1 cut(s) 20
BlsI GCNGC 1 cut(s) 21
BmcAI AGTACT 1 cut(s) 66
Bme1390I CCNGG 1 cut(s) 317
BmrFI CCNGG 1 cut(s) 317
BmsI GCATC 2 cut(s) 33, 218
BpmI CTGGAG 1 cut(s) 282
BsaJI CCNNGG 1 cut(s) 315
BseBI CCWGG 1 cut(s) 317
BseDI CCNNGG 1 cut(s) 315
BseGI GGATG 1 cut(s) 233
BseMII CTCAG 1 cut(s) 310
BseXI GCAGC 1 cut(s) 31
BsgI GTGCAG 1 cut(s) 59
BshFI GGCC 2 cut(s) 112, 294
BsnI GGCC 2 cut(s) 112, 294
Bsp1407I TGTACA 1 cut(s) 330
Bsp143I GATC 1 cut(s) 188
BspANI GGCC 2 cut(s) 112, 294
BspCNI CTCAG 1 cut(s) 309
BsrGI TGTACA 1 cut(s) 330
BssECI CCNNGG 1 cut(s) 315
BssMI GATC 1 cut(s) 188
Bst2UI CCWGG 1 cut(s) 317
Bst4CI ACNGT 2 cut(s) 100, 339
BstAUI TGTACA 1 cut(s) 330
BstDEI CTNAG 1 cut(s) 296
BstF5I GGATG 1 cut(s) 233
BstKTI GATC 1 cut(s) 191
BstMBI GATC 1 cut(s) 188
BstMWI GCNNNNNNNGC 1 cut(s) 16
BstNI CCWGG 1 cut(s) 317
BstSCI CCNGG 1 cut(s) 315
BstSFI CTRYAG 1 cut(s) 252
BstV1I GCAGC 1 cut(s) 31
BsuRI GGCC 2 cut(s) 112, 294
BtsCI GGATG 1 cut(s) 233
Csp6I GTAC 3 cut(s) 65, 169, 331
CviJI RGCY 5 cut(s) 83, 112, 181, 245, 294
CviKI_1 RGCY 5 cut(s) 83, 112, 181, 245, 294
CviQI GTAC 3 cut(s) 65, 169, 331
DdeI CTNAG 1 cut(s) 296
DpnI GATC 1 cut(s) 190
DpnII GATC 1 cut(s) 188
Eco147I AGGCCT 1 cut(s) 112
EcoRII CCWGG 1 cut(s) 315
FaiI YATR 1 cut(s) 237
Fnu4HI GCNGC 1 cut(s) 20
FokI GGATG 1 cut(s) 240
Fsp4HI GCNGC 1 cut(s) 20
FspBI CTAG 2 cut(s) 47, 68
GluI GCNGC 1 cut(s) 20
GsuI CTGGAG 1 cut(s) 282
HaeIII GGCC 2 cut(s) 112, 294
HindIII AAGCTT 1 cut(s) 179
HinfI GANTC 2 cut(s) 121, 281
Hpy166II GTNNAC 1 cut(s) 333
Hpy188I TCNGA 2 cut(s) 193, 299
Hpy188III TCNNGA 1 cut(s) 175
Hpy8I GTNNAC 1 cut(s) 333
HpyAV CCTTC 2 cut(s) 98, 102
HpyCH4III ACNGT 2 cut(s) 100, 339
HpyCH4V TGCA 3 cut(s) 40, 94, 231
HpyF10VI GCNNNNNNNGC 1 cut(s) 16
HpyF3I CTNAG 1 cut(s) 296
Kzo9I GATC 1 cut(s) 188
LmnI GCTCC 1 cut(s) 80
LpnPI CCDG 7 cut(s) 69, 103, 207, 246, 264, 302, 329
Lsp1109I GCAGC 1 cut(s) 31
LweI GCATC 2 cut(s) 33, 218
MaeI CTAG 2 cut(s) 47, 68
MalI GATC 1 cut(s) 190
MboI GATC 1 cut(s) 188
MboII GAAGA 1 cut(s) 25
MluCI AATT 3 cut(s) 28, 88, 286
MmeI TCCRAC 1 cut(s) 183
MnlI CCTC 6 cut(s) 123, 182, 201, 218, 257, 305
MseI TTAA 2 cut(s) 27, 183
MspR9I CCNGG 1 cut(s) 317
MvaI CCWGG 1 cut(s) 317
MwoI GCNNNNNNNGC 1 cut(s) 16
NdeII GATC 1 cut(s) 188
PceI AGGCCT 1 cut(s) 112
PfeI GAWTC 2 cut(s) 121, 281
PkrI GCNGC 1 cut(s) 21
Psp6I CCWGG 1 cut(s) 315
PspGI CCWGG 1 cut(s) 315
RsaI GTAC 3 cut(s) 66, 170, 332
RsaNI GTAC 3 cut(s) 65, 169, 331
SaqAI TTAA 2 cut(s) 27, 183
SatI GCNGC 1 cut(s) 20
Sau3AI GATC 1 cut(s) 188
ScaI AGTACT 1 cut(s) 66
ScrFI CCNGG 1 cut(s) 317
SetI ASST 6 cut(s) 85, 174, 183, 259, 268, 321
SfaNI GCATC 2 cut(s) 33, 218
SfcI CTRYAG 1 cut(s) 252
SpeI ACTAGT 1 cut(s) 67
Sse9I AATT 3 cut(s) 28, 88, 286
SseBI AGGCCT 1 cut(s) 112
SspMI CTAG 2 cut(s) 47, 68
StuI AGGCCT 1 cut(s) 112
StyD4I CCNGG 1 cut(s) 315
TaaI ACNGT 2 cut(s) 100, 339
TaqI TCGA 3 cut(s) 129, 141, 268
TasI AATT 3 cut(s) 28, 88, 286
TatI WGTACW 2 cut(s) 64, 330
TfiI GAWTC 2 cut(s) 121, 281
Tru1I TTAA 2 cut(s) 27, 183
Tru9I TTAA 2 cut(s) 27, 183
TseI GCWGC 1 cut(s) 19
XspI CTAG 2 cut(s) 47, 68
ZrmI AGTACT 1 cut(s) 66
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.