Basic Information

Type: gene

Biological Identity

Species

pyrus_communis

Chromosome

Chr16

Orthogroup ID

N/A

Physical Location & Seq

Genomic Coordinates Forward (+)

11579520 .. 11583369

Gene Structure 3850 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

N/A

Sequence Viewer

CDS Protein Promoter (2k)

Length: 3474 bp

ATGGGAGACAATTGTGGCCACGATATTCCGCGTGAAATATTGACCCATACAAAAATTGTAATCGCCATTGTTGAAAGCAAATACTTTTCATTAGTAGTTGTGTCTACACATAATATAAAAATCTACGCTTCTTATAAATACGAGAAGAAAGCCTCCATAAGCATGTCTTCCAATACCATGCAGCTTTCCGAATTCGGTAGGTGCACTAATAGAATCCAAATCAAACCCAAAAAAAAATGGCGTTCTGCTTATCTGGCCATCTACTGCTCCAGAGCCTTCAACCTTTCTGTGCCCAAATACGCAGACACCGAAGTCTCTCGCTCTCCTCTTTTCGCCAACATCAGAAGGAGAGAGGCAGACGACCGTTTCAGGATTGACCAAACAACCCTCACTGACCTTGTGAAGGACAAGAATCGAGACCGGGTTCAGCAGCTGGGAGGGGTTGAAGGAGTAGCATCATCCCTCAAAGTCGATGCAGACCATGGAATTCAAGGTGATCATGATGGTGAAGATATCGCCCGCAGACAAGAAGTCTTTGGCTCAAACACATACAAGCTACCACCACCAAAAGGGTTGTTCCATTTTGTGTGGGAAGCCTTCAAGGACCTCACCATTCTCATCCTTATAGGTTGCGCTGCACTTTCTCTTGGTTCCGGAATGCACAACCATGGACTGAAGGAAGGTTGGATCCACGAAGGAAGCATATTTCCCGATATCATTTTGGTCATTGCTGTGTCTGCTGTGAGTAATTACAGGCAGAACAGACAGTTTCATAAAATGTCAGAAGTCAGCGACAACGTCCAAGTGGAAGCTCTCAGATGCTGCAGGCGCCAGAATATTTTGAAGTCTGAAATTGTGGTTGGTGATGTCATTTTCTTAAACGTAGGGGATCAAGTTCCAGCCGATGGGTTATTCCTGGATGGTTATTCTTTACAAATAGACGAATCGAGCATGACAGGGGAGATCGACCCTGTTGAAATTAGCCGCAGCCAGAATCCATTCTTGTTTTCTGGTGCCAAGGTGGTTGATGGGTATGGTCGGATGCTGGTAACTTCAGTCGGCATGAACACAATATGGGGCGAGATGACAAGCAGCATCAGCCATGGCACAAGTGAACAGACACCTTTACAAGCTCAAATTAGCAAGCTAACTTACTTAATAATTAAAGTTGGTTTGGCAGTTGCTCTCCTATTGCTCATTGTATTGTTAGTTCGATACTTCACAGGCAATACAGAGGATGAGAATGGAAATCACAAGTTTGATGGCATCAAGACCAAGGCCGATGACATAATATATGCGGTGGCTGGGATTGTAGCGGCTGCAGTTACAATTGTTGTGGTAGCAATCCCAGTAGGTTTGCCACTAGCCGTGGCCCTCACTCTCTCTTATTCCATGAGGCGAATGATGGCCGATAAGGTAATGGTGAGGAAACTCTCTGCTTGTGAGACGATGGGCTCTGCTGCCGTCATTTGTACTCACAAAACAGGCACTCTCACCATGAATGAAATGAAGGTGACCAAGTTTTGGTTGGGCAAAGAACTTGTGTCAGAAGAGGCTTATTCATCTCTTTCTCCGGACGTCCTGAACTTGATCCGAGAAGGGGTTGCTCTCAATACAACTGGTTATGTATACAGACCTACCTCGGATTCAGAAATTGAGATCTCGGGCAGTCCAACAGAAAAGGCTATCCTTTCGTGGGCCGTTCATAAGATGAATATGGATACGCAGCAAGTGGAAACGAGTTGTAGCATTCTCAATGTTGAAGCCTTCAATTCACAAAAGAAACGAAGTGGGATTGTGATGAAGAGGCACGCAGACAATAAAATGCAGGTGCATTGGAAAGGAGCTGCAGAGATGATACTTGCAATGTGCACAAGTTACTACAATGCTTCTGGACATGTTGAGGATATGGATGACAATGCTAAAATGACTTTTGAGCAGATTATTGAGGGTATGGCGGCTAGCAGGCTCCGATGCATTGCTTTTGCTCGTAAAGAAGTTCCAGCTGAGGAGCAAATGGGTGATCAAGGATACAAAGTTGTGCTAAAAGAAGAGGGATTGACCCTGTTAGGACTTGTGGGTCTTAATGATCCATGTCGTCCAGGAGTGAAGACAGCAGTTCGAGACTGTCAGAAGGCAGGAGTGAAGATCAAAATGATCACTGGTGACAATGTTTTCACTGCAAAAGCCATAGCCACCGAATGTGGGATTCTCAAGCATGATGTGGATATGTCAAGCGGAGCAGTGATACAAGGCGTGCAATTTCGCAATTACACACCTCAAGAAAGGAGGGAGAAGGTAGATGAAATCTGTGTAATGGCAAGGTCCTCTCCGTCTGATAAACTTCTCATGGTGCAATGCTTGAAAGAGAGAGGTCATGTGGTTGCAGTGACAGGTGATGGCACAAATGATGCACCAGCATTGACAGAAGCTGATATCGGACTTTCTATGGGGATTCAAGGAACAGAAGTTGCTAAAGAGAGCTCTGATGTTGTGATCATGGATGATAATTTTGCTTCGGTGGCCACAGTTTTGAGGTGGGGAAGATGCGCGTACAGTAACATCCAGAAGTCCATCCAATTCCAGCTCACTGTAAATGTTGCAGCTGTTGGAATCAACTTTATGGCAGCCATTTCGGCAGGTGAAGTCCCATTAACAGCAGTGCAATTGTTGTGGGTAAACTTGATTATTGTCACACTGGGATATTTAGCTATTGCCACAGTAGAGCCCACAAAAGAACTCATGGAAAAGCCACCAGTGGGCAGGACTGAACCTCTCATCGCCAGCATCATGTGGAGGAACCTCTTGCCTCAATCCCTGTACCAAATTGGGGTCCTCTTGACTCTGCAACTAAAGGCAACTAAAGCCTTGATTTTTAACACATTTGTGCTTTGCCAGGTCTTCAATGAGTTCAACGCAAGCAAGCTTGAGAAAAATGTCTTCAAGGGAACCGGCAAACTGTATTTGGGGATCATTGCAGTGACGATTGTCCTCCAAGTGCTGATGCTCGAATTTCTGAATAAATTTTCCGATGGGGAGAGGTTGTATTGGAAGCAATGGTCTGCATGTTTTGGAATTGCAGCTTTCTCCTGGCCAATTGGTTGGGTTGCCAAGCGGTTGGATTTTCAAGTCCTCTGGGAACTGCAACTTTCTCTCGCTTGTAAACTCTCTTGCAAAGGCAGCTTTCACTCAGATGATGTAAACAAGCCCCAGGCTAGAAAGCATTGGCTGGTAATGACAAACAAGATACATGTATCCTGGCCATACAATAATGATAAACCAGAAAAGTCAATGTTCTTTGTTAAATCGATTGGATTGGGAAGCTCCATGCGTTATTATGGTGATTTGGTAATGTATATGAATGATATCTTAATTAGTGGTTTGGTTTCCTTGTCTTGTAGAAAAATGATTGTTTTGATTTATTTACTAGTATTACTCCTTTGTAATCTTATAAATAATAAAGAATTGAAGTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0005215 GO:0005388 GO:0005575 GO:0005622 GO:0005623 GO:0005886 GO:0005887 GO:0006810 GO:0006811 GO:0006812 GO:0006816 GO:0008150 GO:0008324 GO:0015075 GO:0015085 GO:0015318 GO:0015399 GO:0015405 GO:0015662 GO:0016020 GO:0016021 GO:0016462 GO:0016787 GO:0016817 GO:0016818 GO:0016887 GO:0017111 GO:0019829 GO:0022804 GO:0022853 GO:0022857 GO:0022890 GO:0030001 GO:0031224 GO:0031226 GO:0034220 GO:0042623 GO:0042625 GO:0042626 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043492 GO:0044424 GO:0044425 GO:0044459 GO:0044464 GO:0046873 GO:0051179 GO:0051234 GO:0055085 GO:0070588 GO:0070838 GO:0071944 GO:0072511 GO:0090662 GO:0098655 GO:0098660 GO:0098662 GO:0099131 GO:0099132

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Cation_ATPase Cation_ATPase_C Cation_ATPase_N E1-E2_ATPase Hydrolase

Protein Analysis

1158

Amino Acids

128.23

Weight (kDa)

8.23

Isoelectric Point (pI)

36.75

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Cation_ATPase_N	PF00690	145 - 215	2e-14	Cation transporter/ATPase, N-terminus
E1-E2_ATPase	PF00122	272 - 366	1.3e-18	P-type ATPase actuator domain
Cation_ATPase	PF13246	529 - 701	6.3e-32	P-type ATPase, cytoplasmic domain N
Hydrolase	PF00702	667 - 812	4e-13	haloacid dehalogenase-like hydrolase
Cation_ATPase_C	PF00689	883 - 1040	1.4e-30	Cation transporting ATPase, C-terminus

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

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Orthologous Genes

No orthologs found for this gene in the current database.

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	2 cut(s)	135, 3452
AarI	CACCTGC	2 cut(s)	1819, 2630
AasI	GACNNNNNNGTC	2 cut(s)	311, 2079
AatII	GACGTC	1 cut(s)	1581
Acc36I	ACCTGC	2 cut(s)	1819, 2630
AccB1I	GGYRCC	2 cut(s)	828, 1013
AccB7I	CCANNNNNTGG	2 cut(s)	905, 1524
AccI	GTMKAC	2 cut(s)	104, 1629
AccII	CGCG	2 cut(s)	31, 2552
AccIII	TCCGGA	2 cut(s)	653, 1573
AciI	CCGC	8 cut(s)	29, 520, 985, 1298, 1316, 1958, 2238, 3115
AclWI	GGATC	6 cut(s)	682, 695, 897, 1585, 2084, 2978
AcoI	YGGCCR	6 cut(s)	16, 255, 1407, 2523, 3092, 3260
AcsI	RAATTY	4 cut(s)	191, 486, 3011, 3023
AcuI	CTGAAG	2 cut(s)	695, 1038
AcyI	GRCGYC	2 cut(s)	829, 1578
AfaI	GTAC	3 cut(s)	1474, 2555, 2822
AfiI	CCNNNNNNNGG	9 cut(s)	403, 569, 905, 1524, 1600, 1696, 2205, 2759, 2830
AflIII	ACRYGT	2 cut(s)	1897, 3250
AhdI	GACNNNNNGTC	1 cut(s)	530
AhlI	ACTAGT	1 cut(s)	3427
AjnI	CCWGG	6 cut(s)	915, 2101, 2895, 3089, 3210, 3257
AjuI	GAANNNNNNNTTGG	2 cut(s)	843, 875
AleI	CACNNNNGTG	1 cut(s)	2885
Alw21I	GWGCWC	3 cut(s)	206, 1874, 2486
Alw26I	GTCTC	4 cut(s)	319, 411, 1439, 2118
Alw44I	GTGCAC	2 cut(s)	202, 1870
AlwI	GGATC	6 cut(s)	682, 695, 897, 1585, 2084, 2978
AlwNI	CAGNNNCTG	3 cut(s)	433, 822, 2432
Ama87I	CYCGRG	1 cut(s)	1663
Aor13HI	TCCGGA	2 cut(s)	653, 1573
AoxI	GGCC	9 cut(s)	16, 255, 1278, 1371, 1407, 1698, 2523, 3092, 3260
ApaLI	GTGCAC	2 cut(s)	202, 1870
ApoI	RAATTY	4 cut(s)	191, 486, 3011, 3023
Asp700I	GAANNNNTTC	1 cut(s)	998
AspLEI	GCGC	3 cut(s)	635, 831, 2552
AspS9I	GGNCC	5 cut(s)	604, 1372, 1698, 2325, 2833
AsuC2I	CCSGG	1 cut(s)	422
AsuNHI	GCTAGC	1 cut(s)	1961
AvaI	CYCGRG	1 cut(s)	1663
AvaII	GGWCC	3 cut(s)	604, 2325, 2833
BaeGI	GKGCMC	3 cut(s)	206, 294, 1874
BalI	TGGCCA	5 cut(s)	18, 257, 2525, 3094, 3262
BamHI	GGATCC	1 cut(s)	687
BanI	GGYRCC	2 cut(s)	828, 1013
BanII	GRGCYC	3 cut(s)	1457, 2486, 2730
BbsI	GAAGAC	4 cut(s)	159, 2117, 2893, 2932
Bbv12I	GWGCWC	3 cut(s)	206, 1874, 2486
BbvCI	CCTCAGC	1 cut(s)	2007
BceAI	ACGGC	3 cut(s)	1352, 1448, 1685
BcgI	CGANNNNNNTGC	2 cut(s)	2616, 2650
BciT130I	CCWGG	6 cut(s)	917, 2103, 2897, 3091, 3212, 3259
BciVI	GTATCC	3 cut(s)	1714, 2024, 3265
BclI	TGATCA	4 cut(s)	496, 2023, 2157, 2496
BcnI	CCSGG	1 cut(s)	422
BcoDI	GTCTC	4 cut(s)	319, 411, 1439, 2118
BcuI	ACTAGT	1 cut(s)	3427
BfaI	CTAG	4 cut(s)	1364, 1962, 3216, 3428
BfmI	CTRYAG	3 cut(s)	823, 1320, 1848
BfoI	RGCGCY	1 cut(s)	832
BfuAI	ACCTGC	2 cut(s)	1819, 2630
BfuI	GTATCC	3 cut(s)	1714, 2024, 3265
BglI	GCCNNNNNGGC	1 cut(s)	2636
BglII	AGATCT	1 cut(s)	1659
Bme1390I	CCNGG	7 cut(s)	422, 917, 2103, 2897, 3091, 3212, 3259
Bme18I	GGWCC	3 cut(s)	604, 2325, 2833
BmeRI	GACNNNNNGTC	1 cut(s)	530
BmeT110I	CYCGRG	1 cut(s)	1663
BmgT120I	GGNCC	5 cut(s)	604, 1372, 1698, 2325, 2833
BmiI	GGNNCC	8 cut(s)	652, 689, 830, 1015, 1970, 2801, 2834, 2950
BmrFI	CCNGG	7 cut(s)	422, 917, 2103, 2897, 3091, 3212, 3259
BmrI	ACTGGG	2 cut(s)	1343, 2708
BmtI	GCTAGC	1 cut(s)	1965
BmuI	ACTGGG	2 cut(s)	1343, 2708
BoxI	GACNNNNGTC	1 cut(s)	2987
BpiI	GAAGAC	4 cut(s)	159, 2117, 2893, 2932
BpmI	CTGGAG	1 cut(s)	253
Bpu10I	CCTNAGC	1 cut(s)	2007
BpuEI	CTTGAG	3 cut(s)	2198, 2265, 2948
BpuMI	CCSGG	1 cut(s)	422
Bsa29I	ATCGAT	1 cut(s)	3308
BsaHI	GRCGYC	2 cut(s)	829, 1578
BsaI	GGTCTC	1 cut(s)	411
BsaJI	CCNNGG	8 cut(s)	481, 667, 1017, 1102, 1275, 1368, 1641, 3210
BsaWI	WCCGGW	2 cut(s)	653, 1573
BsaXI	ACNNNNNCTCC	2 cut(s)	3029, 3059
Bsc4I	CCNNNNNNNGG	9 cut(s)	403, 569, 905, 1524, 1600, 1696, 2205, 2759, 2830
Bse118I	RCCGGY	1 cut(s)	2951
Bse1I	ACTGG	5 cut(s)	1349, 1624, 2167, 2703, 2756
Bse3DI	GCAATG	6 cut(s)	726, 1872, 1977, 2363, 2973, 3062
BseAI	TCCGGA	2 cut(s)	653, 1573
BseBI	CCWGG	6 cut(s)	917, 2103, 2897, 3091, 3212, 3259
BseCI	ATCGAT	1 cut(s)	3308
BseDI	CCNNGG	8 cut(s)	481, 667, 1017, 1102, 1275, 1368, 1641, 3210
BseGI	GGATG	9 cut(s)	458, 618, 925, 1047, 1243, 1918, 2509, 2562, 2574
BseLI	CCNNNNNNNGG	9 cut(s)	403, 569, 905, 1524, 1600, 1696, 2205, 2759, 2830
BseMI	GCAATG	6 cut(s)	726, 1872, 1977, 2363, 2973, 3062
BseMII	CTCAG	3 cut(s)	829, 1998, 3204
BseNI	ACTGG	5 cut(s)	1349, 1624, 2167, 2703, 2756
BseRI	GAGGAG	2 cut(s)	315, 2024
BseSI	GKGCMC	3 cut(s)	206, 294, 1874
BseYI	CCCAGC	2 cut(s)	433, 1304
BsgI	GTGCAG	1 cut(s)	621
Bsh1236I	CGCG	2 cut(s)	31, 2552
Bsh1285I	CGRYCG	1 cut(s)	364
BshFI	GGCC	9 cut(s)	18, 257, 1280, 1373, 1409, 1700, 2525, 3094, 3262
BshNI	GGYRCC	2 cut(s)	828, 1013
BshVI	ATCGAT	1 cut(s)	3308
BsiEI	CGRYCG	1 cut(s)	364
BsiHKAI	GWGCWC	3 cut(s)	206, 1874, 2486
BsiHKCI	CYCGRG	1 cut(s)	1663
BsiSI	CCGG	4 cut(s)	421, 654, 1574, 2952
BslFI	GGGAC	1 cut(s)	2633
BslI	CCNNNNNNNGG	9 cut(s)	403, 569, 905, 1524, 1600, 1696, 2205, 2759, 2830
BsmAI	GTCTC	4 cut(s)	319, 411, 1439, 2118
BsmBI	CGTCTC	1 cut(s)	1439
BsmFI	GGGAC	1 cut(s)	2633
BsmI	GAATGC	2 cut(s)	663, 1749
BsnI	GGCC	9 cut(s)	18, 257, 1280, 1373, 1409, 1700, 2525, 3094, 3262
Bso31I	GGTCTC	1 cut(s)	411
BsoBI	CYCGRG	1 cut(s)	1663
Bsp1286I	GDGCHC	6 cut(s)	206, 294, 1457, 1874, 2486, 2730
Bsp13I	TCCGGA	2 cut(s)	653, 1573
Bsp19I	CCATGG	3 cut(s)	481, 667, 1102
BspACI	CCGC	8 cut(s)	29, 520, 985, 1298, 1316, 1958, 2238, 3115
BspANI	GGCC	9 cut(s)	18, 257, 1280, 1373, 1409, 1700, 2525, 3094, 3262
BspCNI	CTCAG	3 cut(s)	828, 1999, 3203
BspDI	ATCGAT	1 cut(s)	3308
BspEI	TCCGGA	2 cut(s)	653, 1573
BspFNI	CGCG	2 cut(s)	31, 2552
BspHI	TCATGA	1 cut(s)	499
BspLI	GGNNCC	8 cut(s)	652, 689, 830, 1015, 1970, 2801, 2834, 2950
BspMAI	CTGCAG	3 cut(s)	827, 1324, 1852
BspMI	ACCTGC	2 cut(s)	1819, 2630
BspOI	GCTAGC	1 cut(s)	1965
BspPI	GGATC	6 cut(s)	682, 695, 897, 1585, 2084, 2978
BspT107I	GGYRCC	2 cut(s)	828, 1013
BspTNI	GGTCTC	1 cut(s)	411
BsrDI	GCAATG	6 cut(s)	726, 1872, 1977, 2363, 2973, 3062
BsrFI	RCCGGY	1 cut(s)	2951
BsrI	ACTGG	5 cut(s)	1349, 1624, 2167, 2703, 2756
BssAI	RCCGGY	1 cut(s)	2951
BssECI	CCNNGG	8 cut(s)	481, 667, 1017, 1102, 1275, 1368, 1641, 3210
BssNAI	GTATAC	1 cut(s)	1630
BssNI	GRCGYC	2 cut(s)	829, 1578
BssT1I	CCWWGG	5 cut(s)	481, 667, 1017, 1102, 1275
Bst1107I	GTATAC	1 cut(s)	1630
Bst2UI	CCWGG	6 cut(s)	917, 2103, 2897, 3091, 3212, 3259
Bst4CI	ACNGT	8 cut(s)	365, 768, 2129, 2530, 2558, 2593, 2722, 2961
Bst6I	CTCTTC	3 cut(s)	1545, 1799, 2046
BstACI	GRCGYC	2 cut(s)	829, 1578
BstDEI	CTNAG	3 cut(s)	815, 2007, 3190
BstDSI	CCRYGG	4 cut(s)	481, 667, 1102, 1368
BstEII	GGTNACC	1 cut(s)	1513
BstENI	CCTNNNNNAGG	1 cut(s)	401
BstF5I	GGATG	9 cut(s)	458, 618, 925, 1047, 1243, 1918, 2509, 2562, 2574
BstFNI	CGCG	2 cut(s)	31, 2552
BstH2I	RGCGCY	1 cut(s)	832
BstHHI	GCGC	3 cut(s)	635, 831, 2552
BstMAI	GTCTC	4 cut(s)	319, 411, 1439, 2118
BstMCI	CGRYCG	1 cut(s)	364
BstMWI	GCNNNNNNNGC	8 cut(s)	254, 737, 828, 1098, 2522, 2636, 2864, 3180
BstNI	CCWGG	6 cut(s)	917, 2103, 2897, 3091, 3212, 3259
BstNSI	RCATGY	4 cut(s)	166, 1901, 3069, 3254
BstPAI	GACNNNNGTC	1 cut(s)	2987
BstPI	GGTNACC	1 cut(s)	1513
BstSCI	CCNGG	7 cut(s)	420, 915, 2101, 2895, 3089, 3210, 3257
BstSFI	CTRYAG	3 cut(s)	823, 1320, 1848
BstSLI	GKGCMC	3 cut(s)	206, 294, 1874
BstUI	CGCG	2 cut(s)	31, 2552
BstV2I	GAAGAC	4 cut(s)	159, 2117, 2893, 2932
BstX2I	RGATCY	2 cut(s)	687, 1659
BstXI	CCANNNNNNTGG	2 cut(s)	3102, 3118
BstYI	RGATCY	2 cut(s)	687, 1659
BstZ17I	GTATAC	1 cut(s)	1630
Bsu15I	ATCGAT	1 cut(s)	3308
BsuI	GTATCC	3 cut(s)	1714, 2024, 3265
BsuRI	GGCC	9 cut(s)	18, 257, 1280, 1373, 1409, 1700, 2525, 3094, 3262
BsuTUI	ATCGAT	1 cut(s)	3308
BtgI	CCRYGG	4 cut(s)	481, 667, 1102, 1368
BtgZI	GCGATG	1 cut(s)	2764
BtsCI	GGATG	9 cut(s)	458, 618, 925, 1047, 1243, 1918, 2509, 2562, 2574
BtsI	GCAGTG	5 cut(s)	2178, 2250, 2394, 2667, 2985
BveI	ACCTGC	2 cut(s)	1819, 2630
CaiI	CAGNNNCTG	3 cut(s)	433, 822, 2432
CciI	TCATGA	1 cut(s)	499
CfoI	GCGC	3 cut(s)	635, 831, 2552
Cfr10I	RCCGGY	1 cut(s)	2951
Cfr13I	GGNCC	5 cut(s)	604, 1372, 1698, 2325, 2833
ClaI	ATCGAT	1 cut(s)	3308
Csp6I	GTAC	3 cut(s)	1473, 2554, 2821
CspCI	CAANNNNNGTGG	4 cut(s)	1317, 1352, 2654, 2689
CviQI	GTAC	3 cut(s)	1473, 2554, 2821
DdeI	CTNAG	3 cut(s)	815, 2007, 3190
DinI	GGCGCC	1 cut(s)	830
DrdI	GACNNNNNNGTC	2 cut(s)	311, 2079
DriI	GACNNNNNGTC	1 cut(s)	530
DseDI	GACNNNNNNGTC	2 cut(s)	311, 2079
EaeI	YGGCCR	6 cut(s)	16, 255, 1407, 2523, 3092, 3260
Eam1104I	CTCTTC	3 cut(s)	1545, 1799, 2046
Eam1105I	GACNNNNNGTC	1 cut(s)	530
EarI	CTCTTC	3 cut(s)	1545, 1799, 2046
Ecl136II	GAGCTC	1 cut(s)	2484
Eco130I	CCWWGG	5 cut(s)	481, 667, 1017, 1102, 1275
Eco24I	GRGCYC	3 cut(s)	1457, 2486, 2730
Eco31I	GGTCTC	1 cut(s)	411
Eco32I	GATATC	4 cut(s)	514, 715, 2437, 3367
Eco47I	GGWCC	3 cut(s)	604, 2325, 2833
Eco53kI	GAGCTC	1 cut(s)	2484
Eco57I	CTGAAG	2 cut(s)	695, 1038
Eco88I	CYCGRG	1 cut(s)	1663
Eco91I	GGTNACC	1 cut(s)	1513
EcoICRI	GAGCTC	1 cut(s)	2484
EcoNI	CCTNNNNNAGG	1 cut(s)	401
EcoO109I	RGGNCCY	3 cut(s)	604, 2325, 2833
EcoO65I	GGTNACC	1 cut(s)	1513
EcoRI	GAATTC	2 cut(s)	191, 486
EcoRII	CCWGG	6 cut(s)	915, 2101, 2895, 3089, 3210, 3257
EcoRV	GATATC	4 cut(s)	514, 715, 2437, 3367
EcoT14I	CCWWGG	5 cut(s)	481, 667, 1017, 1102, 1275
EcoT22I	ATGCAT	1 cut(s)	1979
EcoT38I	GRGCYC	3 cut(s)	1457, 2486, 2730
EgeI	GGCGCC	1 cut(s)	830
EheI	GGCGCC	1 cut(s)	830
ErhI	CCWWGG	5 cut(s)	481, 667, 1017, 1102, 1275
Esp3I	CGTCTC	1 cut(s)	1439
FalI	AAGNNNNNCTT	2 cut(s)	151, 183
FaqI	GGGAC	1 cut(s)	2633
FauI	CCCGC	1 cut(s)	527
FbaI	TGATCA	4 cut(s)	496, 2023, 2157, 2496
FblI	GTMKAC	2 cut(s)	104, 1629
FokI	GGATG	9 cut(s)	445, 605, 932, 1054, 1250, 1925, 2516, 2549, 2561
FriOI	GRGCYC	3 cut(s)	1457, 2486, 2730
FspBI	CTAG	4 cut(s)	1364, 1962, 3216, 3428
GlaI	GCGC	3 cut(s)	634, 830, 2551
GsaI	CCCAGC	2 cut(s)	437, 1308
GsuI	CTGGAG	1 cut(s)	253
HaeII	RGCGCY	1 cut(s)	832
HaeIII	GGCC	9 cut(s)	18, 257, 1280, 1373, 1409, 1700, 2525, 3094, 3262
HapII	CCGG	4 cut(s)	421, 654, 1574, 2952
HhaI	GCGC	3 cut(s)	635, 831, 2552
Hin1I	GRCGYC	2 cut(s)	829, 1578
Hin6I	GCGC	3 cut(s)	633, 829, 2550
HinP1I	GCGC	3 cut(s)	633, 829, 2550
HindIII	AAGCTT	1 cut(s)	2924
HinfI	GANTC	9 cut(s)	213, 412, 944, 994, 1646, 2209, 2455, 2613, 2842
HpaII	CCGG	4 cut(s)	421, 654, 1574, 2952
Hpy166II	GTNNAC	8 cut(s)	105, 204, 1115, 1630, 1872, 2680, 3164, 3202
Hpy8I	GTNNAC	8 cut(s)	105, 204, 1115, 1630, 1872, 2680, 3164, 3202
HpyCH4III	ACNGT	8 cut(s)	365, 768, 2129, 2530, 2558, 2593, 2722, 2961
HpyCH4IV	ACGT	3 cut(s)	798, 882, 1578
HpyF10VI	GCNNNNNNNGC	8 cut(s)	254, 737, 828, 1098, 2522, 2636, 2864, 3180
HpyF3I	CTNAG	3 cut(s)	815, 2007, 3190
HpySE526I	ACGT	3 cut(s)	798, 882, 1578
Hsp92I	GRCGYC	2 cut(s)	829, 1578
HspAI	GCGC	3 cut(s)	633, 829, 2550
KasI	GGCGCC	1 cut(s)	828
Kpn2I	TCCGGA	2 cut(s)	653, 1573
Ksp22I	TGATCA	4 cut(s)	496, 2023, 2157, 2496
LmnI	GCTCC	6 cut(s)	272, 1844, 1974, 2011, 2240, 3329
MaeI	CTAG	4 cut(s)	1364, 1962, 3216, 3428
MaeII	ACGT	3 cut(s)	798, 882, 1578
MaeIII	GTNAC	9 cut(s)	1048, 1324, 1513, 1877, 2165, 2389, 2558, 2692, 2980
MfeI	CAATTG	4 cut(s)	10, 1329, 2666, 3096
MflI	RGATCY	2 cut(s)	687, 1659
MhlI	GDGCHC	6 cut(s)	206, 294, 1457, 1874, 2486, 2730
MlsI	TGGCCA	5 cut(s)	18, 257, 2525, 3094, 3262
MluNI	TGGCCA	5 cut(s)	18, 257, 2525, 3094, 3262
Mly113I	GGCGCC	1 cut(s)	829
MlyI	GAGTC	1 cut(s)	2836
MmeI	TCCRAC	5 cut(s)	665, 1019, 1697, 2590, 3099
Mox20I	TGGCCA	5 cut(s)	18, 257, 2525, 3094, 3262
Mph1103I	ATGCAT	1 cut(s)	1979
MroI	TCCGGA	2 cut(s)	653, 1573
MroXI	GAANNNNTTC	1 cut(s)	998
MscI	TGGCCA	5 cut(s)	18, 257, 2525, 3094, 3262
MseI	TTAA	8 cut(s)	878, 1157, 1164, 2085, 2654, 2877, 3303, 3371
MslI	CAYNNNNRTG	7 cut(s)	161, 504, 666, 731, 2885, 2978, 3192
Msp20I	TGGCCA	5 cut(s)	18, 257, 2525, 3094, 3262
MspA1I	CMGCKG	3 cut(s)	433, 2006, 2606
MspI	CCGG	4 cut(s)	421, 654, 1574, 2952
MspR9I	CCNGG	7 cut(s)	422, 917, 2103, 2897, 3091, 3212, 3259
MunI	CAATTG	4 cut(s)	10, 1329, 2666, 3096
Mva1269I	GAATGC	2 cut(s)	663, 1749
MvaI	CCWGG	6 cut(s)	917, 2103, 2897, 3091, 3212, 3259
MvnI	CGCG	2 cut(s)	31, 2552
MwoI	GCNNNNNNNGC	8 cut(s)	254, 737, 828, 1098, 2522, 2636, 2864, 3180
NarI	GGCGCC	1 cut(s)	829
NciI	CCSGG	1 cut(s)	422
NcoI	CCATGG	3 cut(s)	481, 667, 1102
NheI	GCTAGC	1 cut(s)	1961
NlaIV	GGNNCC	8 cut(s)	652, 689, 830, 1015, 1970, 2801, 2834, 2950
NmuCI	GTSAC	5 cut(s)	1513, 2165, 2389, 2692, 2980
NsiI	ATGCAT	1 cut(s)	1979
NspI	RCATGY	4 cut(s)	166, 1901, 3069, 3254
OliI	CACNNNNGTG	1 cut(s)	2885
PagI	TCATGA	1 cut(s)	499
PaqCI	CACCTGC	2 cut(s)	1819, 2630
PciI	ACATGT	2 cut(s)	1897, 3250
PcsI	WCGNNNNNNNCGW	1 cut(s)	306
PctI	GAATGC	2 cut(s)	663, 1749
PdmI	GAANNNNTTC	1 cut(s)	998
PfeI	GAWTC	8 cut(s)	213, 412, 944, 994, 1646, 2209, 2455, 2613
PflFI	GACNNNGTC	1 cut(s)	797
PflMI	CCANNNNNTGG	2 cut(s)	905, 1524
PfoI	TCCNGGA	2 cut(s)	915, 2101
PleI	GAGTC	1 cut(s)	2836
PluTI	GGCGCC	1 cut(s)	832
PpsI	GAGTC	1 cut(s)	2836
PpuMI	RGGWCCY	3 cut(s)	604, 2325, 2833
PscI	ACATGT	2 cut(s)	1897, 3250
PshAI	GACNNNNGTC	1 cut(s)	2987
PsiI	TTATAA	2 cut(s)	135, 3452
Psp124BI	GAGCTC	1 cut(s)	2486
Psp5II	RGGWCCY	3 cut(s)	604, 2325, 2833
Psp6I	CCWGG	6 cut(s)	915, 2101, 2895, 3089, 3210, 3257
PspEI	GGTNACC	1 cut(s)	1513
PspFI	CCCAGC	2 cut(s)	433, 1304
PspGI	CCWGG	6 cut(s)	915, 2101, 2895, 3089, 3210, 3257
PspN4I	GGNNCC	8 cut(s)	652, 689, 830, 1015, 1970, 2801, 2834, 2950
PspPI	GGNCC	5 cut(s)	604, 1372, 1698, 2325, 2833
PspPPI	RGGWCCY	3 cut(s)	604, 2325, 2833
PsrI	GAACNNNNNNTAC	2 cut(s)	1194, 1226
PstI	CTGCAG	3 cut(s)	827, 1324, 1852
PstNI	CAGNNNCTG	3 cut(s)	433, 822, 2432
PsuI	RGATCY	2 cut(s)	687, 1659
PsyI	GACNNNGTC	1 cut(s)	797
PvuII	CAGCTG	3 cut(s)	433, 2006, 2606
RsaI	GTAC	3 cut(s)	1474, 2555, 2822
RsaNI	GTAC	3 cut(s)	1473, 2554, 2821
RseI	CAYNNNNRTG	7 cut(s)	161, 504, 666, 731, 2885, 2978, 3192
SacI	GAGCTC	1 cut(s)	2486
SaqAI	TTAA	8 cut(s)	878, 1157, 1164, 2085, 2654, 2877, 3303, 3371
Sau96I	GGNCC	5 cut(s)	604, 1372, 1698, 2325, 2833
SchI	GAGTC	1 cut(s)	2836
ScrFI	CCNGG	7 cut(s)	422, 917, 2103, 2897, 3091, 3212, 3259
SduI	GDGCHC	6 cut(s)	206, 294, 1457, 1874, 2486, 2730
SfcI	CTRYAG	3 cut(s)	823, 1320, 1848
SfoI	GGCGCC	1 cut(s)	830
SinI	GGWCC	3 cut(s)	604, 2325, 2833
SmiMI	CAYNNNNRTG	7 cut(s)	161, 504, 666, 731, 2885, 2978, 3192
SmlI	CTYRAG	3 cut(s)	2213, 2280, 2927
SmoI	CTYRAG	3 cut(s)	2213, 2280, 2927
SpeI	ACTAGT	1 cut(s)	3427
SsiI	CCGC	8 cut(s)	29, 520, 985, 1298, 1316, 1958, 2238, 3115
SspDI	GGCGCC	1 cut(s)	828
SspI	AATATT	2 cut(s)	39, 838
SspMI	CTAG	4 cut(s)	1364, 1962, 3216, 3428
SstI	GAGCTC	1 cut(s)	2486
StyD4I	CCNGG	7 cut(s)	420, 915, 2101, 2895, 3089, 3210, 3257
StyI	CCWWGG	5 cut(s)	481, 667, 1017, 1102, 1275
TaaI	ACNGT	8 cut(s)	365, 768, 2129, 2530, 2558, 2593, 2722, 2961
TaiI	ACGT	3 cut(s)	801, 885, 1581
TaqI	TCGA	8 cut(s)	415, 471, 947, 966, 1213, 2122, 3009, 3308
TatI	WGTACW	1 cut(s)	1472
TauI	GCSGC	3 cut(s)	987, 1319, 1961
TfiI	GAWTC	8 cut(s)	213, 412, 944, 994, 1646, 2209, 2455, 2613
Tru1I	TTAA	8 cut(s)	878, 1157, 1164, 2085, 2654, 2877, 3303, 3371
Tru9I	TTAA	8 cut(s)	878, 1157, 1164, 2085, 2654, 2877, 3303, 3371
TseFI	GTSAC	5 cut(s)	1513, 2165, 2389, 2692, 2980
Tsp45I	GTSAC	5 cut(s)	1513, 2165, 2389, 2692, 2980
TspGWI	ACGGA	1 cut(s)	2322
Tth111I	GACNNNGTC	1 cut(s)	797
Van91I	CCANNNNNTGG	2 cut(s)	905, 1524
VneI	GTGCAC	2 cut(s)	202, 1870
VpaK11BI	GGWCC	3 cut(s)	604, 2325, 2833
XagI	CCTNNNNNAGG	1 cut(s)	401
XapI	RAATTY	4 cut(s)	191, 486, 3011, 3023
XceI	RCATGY	4 cut(s)	166, 1901, 3069, 3254
XcmI	CCANNNNNNNNNTGG	1 cut(s)	1525
XmiI	GTMKAC	2 cut(s)	104, 1629
XmnI	GAANNNNTTC	1 cut(s)	998
XspI	CTAG	4 cut(s)	1364, 1962, 3216, 3428
ZraI	GACGTC	1 cut(s)	1579
Zsp2I	ATGCAT	1 cut(s)	1979

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.