pycom16g15770
NAC Family

Transcription regulatory protein SNF2-like

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr16
N/A
Physical Location & Seq
Forward (+)
11703312 .. 11706053
2742 bp
Loading structure...
UTR
Exon/CDS
Intron
pycom16g15770.4

Sequence Viewer

Length: 924 bp
ATGAGTGTGCTCTTGCACAAACACTTGCAGGGTACTTACGATATGCGACGTAGACTTCTGTTGACTGGTACCCCAATACAGAATAGCTTGCAGGAGTTGTGGTCCCTGCTTAATTTCCTTCTCCCACACATTTTTAATTCAGTTCAGAATTTTGAGGACTGGTTTAATGCACCTTTTGCGGATCGGGGCAGTATTTCTCTTACCGATGAAGAACAGCTATTGATCATTCGCCGTCTACATCATGTTATACGGCCCTTCATACTAAGGAGGAAAAAAGATGAGGTGGAGAAGTTCCTTCCTGGAAAATCTCAAGTCATACTGAAATGTGACATGTCAGCATGGCAGAAAGTATACTATCAGCAAGTTACAGATGTGGGCAGAGTTGGGCTCGATAATGGTTCTGGAAAATCAAAGAGCTTGCAGAACCTGACAATGCAACTCAGGAAGTGTTGTAACCACCCATACCTTTTTGTGGGAGATTATAACATGTGGCGCAAGGAGGAGATCATCAGGGCATCGGGAAAGTTTGAACTACTTGATCGTCTACTCCCAAAACTCTACAAAGCGGGGCACAGAATCCTGCTTTTCTCACAAATGACTCGTCTCATGGACATTCTTGAAATTTATATGCAACTTCACGACTTTAAGTATCTTCGACTGGATGGTTCAACAAAAACTGAGGAAAGAGGGACTCTGCTTAAGAAATTCAACGCTCCAGACTCTCCTTATTTCATGTTTCTCTTGAGCACTCGTGCTGGAGGCCTTGGTTTGAACTTACAAACAGCAGATACGGTAATAATTTTCGACAGTGATTGGAATCCCCAGATGGACCAACAGGCAGAGGATAGGGCTCATCGTATAGGTCAAAAGAAAGAAGTTAGGGTATTTGTGTTGGTTAGTGTTGGATCGATCCTGAAGAAGTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0000003 GO:0000182 GO:0000228 GO:0000785 GO:0000790 GO:0000902 GO:0001085 GO:0001101 GO:0001102 GO:0003006 GO:0003674 GO:0003676 GO:0003677 GO:0003682 GO:0003690 GO:0003824 GO:0005488 GO:0005515 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005694 GO:0005975 GO:0005984 GO:0005985 GO:0005987 GO:0006066 GO:0006139 GO:0006259 GO:0006260 GO:0006261 GO:0006281 GO:0006302 GO:0006310 GO:0006325 GO:0006338 GO:0006355 GO:0006357 GO:0006725 GO:0006807 GO:0006950 GO:0006970 GO:0006974 GO:0006996 GO:0007154 GO:0007275 GO:0008094 GO:0008134 GO:0008150 GO:0008152 GO:0009056 GO:0009058 GO:0009059 GO:0009266 GO:0009267 GO:0009311 GO:0009313 GO:0009408 GO:0009414 GO:0009415 GO:0009605 GO:0009628 GO:0009651 GO:0009653 GO:0009791 GO:0009826 GO:0009888 GO:0009889 GO:0009891 GO:0009893 GO:0009987 GO:0009991 GO:0010015 GO:0010035 GO:0010073 GO:0010074 GO:0010078 GO:0010154 GO:0010162 GO:0010231 GO:0010431 GO:0010453 GO:0010455 GO:0010468 GO:0010492 GO:0010556 GO:0010557 GO:0010570 GO:0010604 GO:0010628 GO:0010810 GO:0010811 GO:0016043 GO:0016049 GO:0016052 GO:0016462 GO:0016514 GO:0016787 GO:0016817 GO:0016818 GO:0016887 GO:0017111 GO:0019219 GO:0019222 GO:0019827 GO:0021700 GO:0022414 GO:0022611 GO:0022622 GO:0030155 GO:0031323 GO:0031325 GO:0031326 GO:0031328 GO:0031490 GO:0031491 GO:0031492 GO:0031494 GO:0031496 GO:0031667 GO:0031668 GO:0031669 GO:0031974 GO:0031981 GO:0032501 GO:0032502 GO:0032504 GO:0032989 GO:0032991 GO:0033554 GO:0033613 GO:0034198 GO:0034641 GO:0034645 GO:0034728 GO:0036003 GO:0040007 GO:0040008 GO:0042148 GO:0042221 GO:0042393 GO:0042594 GO:0042623 GO:0042766 GO:0043044 GO:0043170 GO:0043226 GO:0043227 GO:0043228 GO:0043229 GO:0043231 GO:0043232 GO:0043233 GO:0043565 GO:0043618 GO:0043620 GO:0043900 GO:0043902 GO:0043933 GO:0044107 GO:0044109 GO:0044237 GO:0044238 GO:0044248 GO:0044249 GO:0044260 GO:0044262 GO:0044275 GO:0044281 GO:0044282 GO:0044422 GO:0044424 GO:0044427 GO:0044428 GO:0044446 GO:0044454 GO:0044464 GO:0044877 GO:0045595 GO:0045597 GO:0045785 GO:0045893 GO:0045927 GO:0045935 GO:0045944 GO:0046164 GO:0046352 GO:0046483 GO:0048316 GO:0048364 GO:0048507 GO:0048518 GO:0048522 GO:0048589 GO:0048608 GO:0048609 GO:0048731 GO:0048856 GO:0048869 GO:0050789 GO:0050793 GO:0050794 GO:0050896 GO:0051094 GO:0051171 GO:0051173 GO:0051252 GO:0051254 GO:0051276 GO:0051716 GO:0060255 GO:0060560 GO:0061412 GO:0061458 GO:0065007 GO:0070013 GO:0070577 GO:0070603 GO:0070784 GO:0070786 GO:0071496 GO:0071695 GO:0071704 GO:0071824 GO:0071840 GO:0080090 GO:0090033 GO:0090304 GO:0097159 GO:0097437 GO:0098727 GO:0099402 GO:0140030 GO:0140033 GO:1900187 GO:1900189 GO:1900190 GO:1900192 GO:1900428 GO:1900430 GO:1901360 GO:1901363 GO:1901575 GO:1901576 GO:1901615 GO:1901616 GO:1901700 GO:1902494 GO:1902680 GO:1903506 GO:1903508 GO:1904949 GO:1905392 GO:1990837 GO:1990928 GO:2000112 GO:2000217 GO:2000219 GO:2000241 GO:2000243 GO:2001141
KEGG Pathways
Metabolic & Signaling
Pfam Domains
Protein Families

Protein Analysis

308

Amino Acids

35.83

Weight (kDa)

9.51

Isoelectric Point (pI)

43.88

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

Orthologous Genes

No orthologs found for this gene in the current database.

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 483
Acc65I GGTACC 1 cut(s) 68
AccB1I GGYRCC 1 cut(s) 68
AccI GTMKAC 4 cut(s) 52, 235, 351, 544
AciI CCGC 2 cut(s) 179, 566
AclWI GGATC 3 cut(s) 189, 904, 913
AcsI RAATTY 3 cut(s) 148, 621, 704
AfaI GTAC 2 cut(s) 34, 70
AfiI CCNNNNNNNGG 1 cut(s) 472
AflII CTTAAG 1 cut(s) 698
AflIII ACRYGT 2 cut(s) 330, 486
AgsI TTSAA 5 cut(s) 530, 620, 669, 709, 772
AjnI CCWGG 1 cut(s) 298
AluBI AGCT 3 cut(s) 87, 217, 417
AluI AGCT 3 cut(s) 87, 217, 417
Alw21I GWGCWC 2 cut(s) 12, 749
Alw26I GTCTC 1 cut(s) 608
AlwI GGATC 3 cut(s) 189, 904, 913
AlwNI CAGNNNCTG 1 cut(s) 427
AoxI GGCC 2 cut(s) 251, 760
ApoI RAATTY 3 cut(s) 148, 621, 704
ArsI GACNNNNNNTTYG 2 cut(s) 586, 618
Asp718I GGTACC 1 cut(s) 68
AspLEI GCGC 1 cut(s) 495
AspS9I GGNCC 3 cut(s) 102, 252, 829
AvaII GGWCC 2 cut(s) 102, 829
BaeGI GKGCMC 1 cut(s) 573
BanI GGYRCC 1 cut(s) 68
BanII GRGCYC 2 cut(s) 390, 853
BauI CACGAG 1 cut(s) 750
Bbv12I GWGCWC 2 cut(s) 12, 749
BccI CCATC 2 cut(s) 656, 820
BceAI ACGGC 2 cut(s) 216, 266
BciT130I CCWGG 1 cut(s) 300
BclI TGATCA 1 cut(s) 222
BcoDI GTCTC 1 cut(s) 608
BfrI CTTAAG 1 cut(s) 698
Bme1390I CCNGG 1 cut(s) 300
Bme18I GGWCC 2 cut(s) 102, 829
BmgT120I GGNCC 3 cut(s) 102, 252, 829
BmiI GGNNCC 2 cut(s) 70, 104
BmrFI CCNGG 1 cut(s) 300
BmsI GCATC 1 cut(s) 524
BplI GAGNNNNNCTC 2 cut(s) 372, 404
BpmI CTGGAG 2 cut(s) 699, 777
BpuEI CTTGAG 2 cut(s) 294, 763
Bsa29I ATCGAT 1 cut(s) 908
BsaBI GATNNNNATC 1 cut(s) 816
BsaJI CCNNGG 1 cut(s) 763
BsaXI ACNNNNNCTCC 2 cut(s) 86, 116
Bsc4I CCNNNNNNNGG 1 cut(s) 472
Bse1I ACTGG 3 cut(s) 70, 164, 663
Bse8I GATNNNNATC 1 cut(s) 816
BseBI CCWGG 1 cut(s) 300
BseCI ATCGAT 1 cut(s) 908
BseDI CCNNGG 1 cut(s) 763
BseGI GGATG 1 cut(s) 667
BseJI GATNNNNATC 1 cut(s) 816
BseLI CCNNNNNNNGG 1 cut(s) 472
BseMII CTCAG 2 cut(s) 454, 669
BseNI ACTGG 3 cut(s) 70, 164, 663
BseRI GAGGAG 1 cut(s) 515
BseSI GKGCMC 1 cut(s) 573
BshFI GGCC 2 cut(s) 253, 762
BshNI GGYRCC 1 cut(s) 68
BshVI ATCGAT 1 cut(s) 908
BsiHKAI GWGCWC 2 cut(s) 12, 749
BslFI GGGAC 2 cut(s) 88, 703
BslI CCNNNNNNNGG 1 cut(s) 472
BsmAI GTCTC 1 cut(s) 608
BsmBI CGTCTC 1 cut(s) 608
BsmFI GGGAC 2 cut(s) 88, 703
BsnI GGCC 2 cut(s) 253, 762
Bsp1286I GDGCHC 5 cut(s) 12, 390, 573, 749, 853
Bsp143I GATC 6 cut(s) 181, 222, 504, 538, 905, 909
BspACI CCGC 2 cut(s) 179, 566
BspANI GGCC 2 cut(s) 253, 762
BspCNI CTCAG 2 cut(s) 453, 670
BspDI ATCGAT 1 cut(s) 908
BspLI GGNNCC 2 cut(s) 70, 104
BspPI GGATC 3 cut(s) 189, 904, 913
BspT107I GGYRCC 1 cut(s) 68
BspTI CTTAAG 1 cut(s) 698
BsrI ACTGG 3 cut(s) 70, 164, 663
BssECI CCNNGG 1 cut(s) 763
BssMI GATC 6 cut(s) 181, 222, 504, 538, 905, 909
BssNAI GTATAC 1 cut(s) 352
BssSI CACGAG 1 cut(s) 750
BssT1I CCWWGG 1 cut(s) 763
Bst1107I GTATAC 1 cut(s) 352
Bst2BI CACGAG 1 cut(s) 750
Bst2UI CCWGG 1 cut(s) 300
Bst4CI ACNGT 2 cut(s) 793, 809
BstAFI CTTAAG 1 cut(s) 698
BstAPI GCANNNNNTGC 1 cut(s) 176
BstC8I GCNNGC 2 cut(s) 89, 419
BstDEI CTNAG 3 cut(s) 263, 440, 678
BstF5I GGATG 1 cut(s) 667
BstHHI GCGC 1 cut(s) 495
BstKTI GATC 6 cut(s) 184, 225, 507, 541, 908, 912
BstMAI GTCTC 1 cut(s) 608
BstMBI GATC 6 cut(s) 181, 222, 504, 538, 905, 909
BstMWI GCNNNNNNNGC 1 cut(s) 176
BstNI CCWGG 1 cut(s) 300
BstNSI RCATGY 2 cut(s) 334, 490
BstSCI CCNGG 1 cut(s) 298
BstSLI GKGCMC 1 cut(s) 573
BstZ17I GTATAC 1 cut(s) 352
Bsu15I ATCGAT 1 cut(s) 908
BsuRI GGCC 2 cut(s) 253, 762
BsuTUI ATCGAT 1 cut(s) 908
BtsCI GGATG 1 cut(s) 667
BtsIMutI CAGTG 1 cut(s) 814
Cac8I GCNNGC 2 cut(s) 89, 419
CaiI CAGNNNCTG 1 cut(s) 427
CfoI GCGC 1 cut(s) 495
Cfr13I GGNCC 3 cut(s) 102, 252, 829
ClaI ATCGAT 1 cut(s) 908
Csp6I GTAC 2 cut(s) 33, 69
CviAII CATG 6 cut(s) 242, 331, 339, 487, 607, 733
CviJI RGCY 7 cut(s) 87, 217, 253, 388, 417, 762, 851
CviKI_1 RGCY 7 cut(s) 87, 217, 253, 388, 417, 762, 851
CviQI GTAC 2 cut(s) 33, 69
DdeI CTNAG 3 cut(s) 263, 440, 678
DpnI GATC 6 cut(s) 183, 224, 506, 540, 907, 911
DpnII GATC 6 cut(s) 181, 222, 504, 538, 905, 909
Eco130I CCWWGG 1 cut(s) 763
Eco147I AGGCCT 1 cut(s) 762
Eco24I GRGCYC 2 cut(s) 390, 853
Eco47I GGWCC 2 cut(s) 102, 829
EcoRII CCWGG 1 cut(s) 298
EcoT14I CCWWGG 1 cut(s) 763
EcoT38I GRGCYC 2 cut(s) 390, 853
ErhI CCWWGG 1 cut(s) 763
Esp3I CGTCTC 1 cut(s) 608
FaeI CATG 6 cut(s) 245, 334, 342, 490, 610, 736
FaqI GGGAC 2 cut(s) 88, 703
FatI CATG 6 cut(s) 241, 330, 338, 486, 606, 732
FauI CCCGC 1 cut(s) 559
FbaI TGATCA 1 cut(s) 222
FblI GTMKAC 4 cut(s) 52, 235, 351, 544
FokI GGATG 1 cut(s) 674
FriOI GRGCYC 2 cut(s) 390, 853
GlaI GCGC 1 cut(s) 494
GsuI CTGGAG 2 cut(s) 699, 777
HaeIII GGCC 2 cut(s) 253, 762
HhaI GCGC 1 cut(s) 495
Hin1II CATG 6 cut(s) 245, 334, 342, 490, 610, 736
Hin6I GCGC 1 cut(s) 493
HinP1I GCGC 1 cut(s) 493
HincII GTYRAC 1 cut(s) 63
HindII GTYRAC 1 cut(s) 63
HinfI GANTC 5 cut(s) 576, 598, 691, 719, 817
Hpy166II GTNNAC 5 cut(s) 53, 63, 236, 352, 545
Hpy188I TCNGA 1 cut(s) 147
Hpy188III TCNNGA 8 cut(s) 402, 442, 519, 617, 638, 716, 742, 913
Hpy8I GTNNAC 5 cut(s) 53, 63, 236, 352, 545
Hpy99I CGWCG 1 cut(s) 51
HpyAV CCTTC 3 cut(s) 128, 265, 305
HpyCH4III ACNGT 2 cut(s) 793, 809
HpyCH4IV ACGT 1 cut(s) 49
HpyCH4V TGCA 7 cut(s) 16, 28, 91, 170, 421, 436, 631
HpyF10VI GCNNNNNNNGC 1 cut(s) 176
HpyF3I CTNAG 3 cut(s) 263, 440, 678
HpySE526I ACGT 1 cut(s) 49
Hsp92II CATG 6 cut(s) 245, 334, 342, 490, 610, 736
HspAI GCGC 1 cut(s) 493
KpnI GGTACC 1 cut(s) 72
Ksp22I TGATCA 1 cut(s) 222
Kzo9I GATC 6 cut(s) 181, 222, 504, 538, 905, 909
LmnI GCTCC 1 cut(s) 718
LweI GCATC 1 cut(s) 524
MaeII ACGT 1 cut(s) 49
MaeIII GTNAC 3 cut(s) 326, 364, 452
MalI GATC 6 cut(s) 183, 224, 506, 540, 907, 911
MboI GATC 6 cut(s) 181, 222, 504, 538, 905, 909
MboII GAAGA 2 cut(s) 221, 644
MhlI GDGCHC 5 cut(s) 12, 390, 573, 749, 853
MluCI AATT 6 cut(s) 112, 136, 148, 621, 704, 798
MlyI GAGTC 3 cut(s) 592, 685, 713
MmeI TCCRAC 1 cut(s) 883
MnlI CCTC 8 cut(s) 148, 261, 274, 493, 673, 680, 752, 835
MseI TTAA 5 cut(s) 111, 135, 165, 645, 699
MspCI CTTAAG 1 cut(s) 698
MspR9I CCNGG 1 cut(s) 300
MvaI CCWGG 1 cut(s) 300
MwoI GCNNNNNNNGC 1 cut(s) 176
NdeII GATC 6 cut(s) 181, 222, 504, 538, 905, 909
NlaIII CATG 6 cut(s) 245, 334, 342, 490, 610, 736
NlaIV GGNNCC 2 cut(s) 70, 104
NmuCI GTSAC 1 cut(s) 326
NspI RCATGY 2 cut(s) 334, 490
PceI AGGCCT 1 cut(s) 762
PciI ACATGT 2 cut(s) 330, 486
PfeI GAWTC 2 cut(s) 576, 817
PfoI TCCNGGA 1 cut(s) 298
PleI GAGTC 3 cut(s) 592, 685, 713
PpsI GAGTC 3 cut(s) 592, 685, 713
PscI ACATGT 2 cut(s) 330, 486
PsiI TTATAA 1 cut(s) 483
Psp6I CCWGG 1 cut(s) 298
PspGI CCWGG 1 cut(s) 298
PspN4I GGNNCC 2 cut(s) 70, 104
PspPI GGNCC 3 cut(s) 102, 252, 829
PstNI CAGNNNCTG 1 cut(s) 427
RsaI GTAC 2 cut(s) 34, 70
RsaNI GTAC 2 cut(s) 33, 69
SaqAI TTAA 5 cut(s) 111, 135, 165, 645, 699
Sau3AI GATC 6 cut(s) 181, 222, 504, 538, 905, 909
Sau96I GGNCC 3 cut(s) 102, 252, 829
SchI GAGTC 3 cut(s) 592, 685, 713
ScrFI CCNGG 1 cut(s) 300
SduI GDGCHC 5 cut(s) 12, 390, 573, 749, 853
SetI ASST 9 cut(s) 52, 89, 175, 219, 285, 419, 429, 468, 865
SfaNI GCATC 1 cut(s) 524
SinI GGWCC 2 cut(s) 102, 829
SmlI CTYRAG 3 cut(s) 309, 698, 742
SmoI CTYRAG 3 cut(s) 309, 698, 742
Sse9I AATT 6 cut(s) 112, 136, 148, 621, 704, 798
SseBI AGGCCT 1 cut(s) 762
SsiI CCGC 2 cut(s) 179, 566
StuI AGGCCT 1 cut(s) 762
StyD4I CCNGG 1 cut(s) 298
StyI CCWWGG 1 cut(s) 763
TaaI ACNGT 2 cut(s) 793, 809
TaiI ACGT 1 cut(s) 52
TaqI TCGA 4 cut(s) 390, 655, 804, 908
TasI AATT 6 cut(s) 112, 136, 148, 621, 704, 798
TfiI GAWTC 2 cut(s) 576, 817
Tru1I TTAA 5 cut(s) 111, 135, 165, 645, 699
Tru9I TTAA 5 cut(s) 111, 135, 165, 645, 699
TscAI CASTG 1 cut(s) 814
TseFI GTSAC 1 cut(s) 326
Tsp45I GTSAC 1 cut(s) 326
TspDTI ATGAA 3 cut(s) 222, 247, 721
TspRI CASTG 1 cut(s) 814
Vha464I CTTAAG 1 cut(s) 698
VpaK11BI GGWCC 2 cut(s) 102, 829
XapI RAATTY 3 cut(s) 148, 621, 704
XceI RCATGY 2 cut(s) 334, 490
XmiI GTMKAC 4 cut(s) 52, 235, 351, 544
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.