pycom16g23740

Regulator of nonsense transcripts 1 homolog

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr16
N/A
Physical Location & Seq
Forward (+)
25008518 .. 25012905
4388 bp
Loading structure...
UTR
Exon/CDS
Intron
N/A

Sequence Viewer

Length: 1290 bp
ATGGATTCACAGCCCAACAACCTCTTTGACACGGCGTCGCAGCCCGACACCGCCAATGACGCCTACACCTTCCTCGAATTCAACACCCAAGGCGAGGACTTTGACTACCCGGAGTTCCGCGACCCGATTCGGTCCCCTGTCGCCTGGCCCACCGCTTCAGATTCCTTGTCGGAACCCGCGGACCGTGACCGTGGCGGGGGTGGAGTCGGATCGGACCACCAGTCTGATGCATCACCGGTTTCAGCTGCCCCGGGCAGCGCCACAAAGGCTAGGGCAGGTGGGTCGGGCAGTAACGCCGGGAATAATCAGGTGGTTGACGTCCTAACTGCTGGGATGAGTGTGCTTAATTTTGAGGACACTGGGGATGACGACAATTACGAGTTTGGAAAAGGGGATTTCACGGAACATGCGTGCCGGTACTGCGGCGTGTCGAACCCGGCGTGCGTTGTGAGGTGTAATGTGCCTTCGTGTCGGAAATGGTTCTGTAATTCTAGGGGGAATACGTCCGGCTCCCATATTGTGAATCACCTGGTCCGAGCCAAACACAAGGAAGTCTGTCTTCATAAAGATAGCCCATTGGGAGAAACAATCCTTGAATGCTACAACTGTGGATGTCGTAATGTATTCCTTCTGGGATTTATTTCAGCCAAGACAGAGAGTGTTGTTGTTCTTCTTTGTAGGGAACCCTGCTTAAGTGTTAATGCATTGAAGGATATGAACTGGGATCTGAGCCAGTGGTGTCCCCTGATAGATGATAGGTGTTTCTTGCAGTGGCTTGTTAAGGTCCCGTCTGAACAGGAGCAGCTAAGGGCGCGCCAAATCAGTGCTCAACAAATAAATAAAGTAGAAGAACTTTGGAAGAGCAATCCTGATGCTTCCCTTGAAGATCTCGAGAAGCCGGGTGTGGACGATGAACCCCAACCTGTGGCCTTGAAGTATGAAGATGCTTACCAGTATCAAAATGTGTTTGCACCACTTATTAAACTTGAAGCTGACTATGATAAAATGATGAAAGAATCTCAAAGCAAAGACAATGTCACAATTCGGTGGGATATTGGTCTTAACAAGAAGCGTATTGCTTATTTTGTGTTTACAAAGGAAGACAATGAGTTGCGCCTTGTACCTGGTGATGAGTTGCGGCTTCGTTATTCTGGAGATGCAGCTCATCCAGCATGGCAGTCAGTGGGACATGTTATCAAGTTAACTGCACAAGAAGAGGTTGCACTTGAACTTCGTGCCAGTCAGGGAGTTCCAGTGGATCGATCGTTTGAACCATGGCTTCAGTGTTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0000184 GO:0000932 GO:0000956 GO:0001101 GO:0003674 GO:0003676 GO:0003723 GO:0003729 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005829 GO:0005886 GO:0005911 GO:0006139 GO:0006401 GO:0006402 GO:0006725 GO:0006807 GO:0006950 GO:0006952 GO:0007154 GO:0007165 GO:0008150 GO:0008152 GO:0009056 GO:0009057 GO:0009314 GO:0009416 GO:0009506 GO:0009605 GO:0009607 GO:0009611 GO:0009617 GO:0009628 GO:0009648 GO:0009719 GO:0009725 GO:0009743 GO:0009751 GO:0009753 GO:0009755 GO:0009756 GO:0009863 GO:0009867 GO:0009892 GO:0009987 GO:0010033 GO:0010182 GO:0010468 GO:0010605 GO:0010629 GO:0014070 GO:0016020 GO:0016070 GO:0016071 GO:0019222 GO:0019439 GO:0023052 GO:0030054 GO:0032870 GO:0032991 GO:0034641 GO:0034655 GO:0035690 GO:0035770 GO:0036464 GO:0042221 GO:0042493 GO:0042742 GO:0043170 GO:0043207 GO:0043226 GO:0043228 GO:0043229 GO:0043232 GO:0044237 GO:0044238 GO:0044248 GO:0044260 GO:0044265 GO:0044270 GO:0044424 GO:0044444 GO:0044464 GO:0046483 GO:0046677 GO:0046700 GO:0048519 GO:0048571 GO:0050789 GO:0050794 GO:0050896 GO:0051704 GO:0051707 GO:0051716 GO:0055044 GO:0060255 GO:0065007 GO:0070887 GO:0071229 GO:0071236 GO:0071310 GO:0071322 GO:0071395 GO:0071407 GO:0071446 GO:0071495 GO:0071704 GO:0071944 GO:0090304 GO:0097159 GO:0098542 GO:1901360 GO:1901361 GO:1901363 GO:1901575 GO:1901700 GO:1901701 GO:1990904
KEGG Pathways
Metabolic & Signaling
ko03013 ko03015 map03013 map03015
Pfam Domains
Protein Families
AAA_11 AAA_12 ResIII UPF1_Zn_bind

Protein Analysis

430

Amino Acids

47.74

Weight (kDa)

4.8

Isoelectric Point (pI)

50.51

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
UPF1_Zn_bind PF09416 136 - 289 1.4e-73 RNA helicase (UPF2 interacting domain)
UPF1_1B_dom PF18141 341 - 421 1.4e-22 RNA helicase UPF1, 1B domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Orthologous Genes

No orthologs found for this gene in the current database.

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 266
AatII GACGTC 1 cut(s) 321
Acc36I ACCTGC 1 cut(s) 266
AccB7I CCANNNNNTGG 1 cut(s) 925
AccII CGCG 3 cut(s) 120, 179, 814
AciI CCGC 8 cut(s) 51, 118, 153, 177, 179, 195, 423, 1138
AclWI GGATC 3 cut(s) 217, 732, 1266
AcsI RAATTY 1 cut(s) 77
AcuI CTGAAG 2 cut(s) 141, 1265
AcyI GRCGYC 3 cut(s) 35, 60, 318
AfaI GTAC 2 cut(s) 419, 1122
AfiI CCNNNNNNNGG 3 cut(s) 94, 196, 925
AflII CTTAAG 1 cut(s) 691
AflIII ACRYGT 1 cut(s) 1189
AgeI ACCGGT 1 cut(s) 235
AgsI TTSAA 8 cut(s) 82, 596, 709, 884, 934, 989, 1229, 1271
AhdI GACNNNNNGTC 2 cut(s) 34, 220
AjnI CCWGG 3 cut(s) 143, 528, 1123
AluBI AGCT 4 cut(s) 245, 805, 992, 1163
AluI AGCT 4 cut(s) 245, 805, 992, 1163
Alw21I GWGCWC 1 cut(s) 829
AlwI GGATC 3 cut(s) 217, 732, 1266
Ama87I CYCGRG 2 cut(s) 250, 890
AoxI GGCC 2 cut(s) 146, 927
ApeKI GCWGC 5 cut(s) 40, 245, 255, 802, 1160
ApoI RAATTY 1 cut(s) 77
ArsI GACNNNNNNTTYG 2 cut(s) 1020, 1052
AscI GGCGCGCC 1 cut(s) 812
AsiGI ACCGGT 1 cut(s) 235
Asp700I GAANNNNTTC 1 cut(s) 479
AspLEI GCGC 4 cut(s) 260, 814, 816, 1116
AspS9I GGNCC 6 cut(s) 132, 147, 181, 214, 532, 784
AsuC2I CCSGG 6 cut(s) 110, 251, 252, 298, 437, 900
AsuHPI GGTGA 3 cut(s) 225, 518, 1139
AvaI CYCGRG 2 cut(s) 250, 890
AvaII GGWCC 5 cut(s) 132, 181, 214, 532, 784
BarI GAAGNNNNNNTAC 2 cut(s) 448, 480
BbsI GAAGAC 2 cut(s) 551, 1107
Bbv12I GWGCWC 1 cut(s) 829
BbvI GCAGC 5 cut(s) 52, 232, 267, 814, 1172
BceAI ACGGC 1 cut(s) 48
BcgI CGANNNNNNTGC 2 cut(s) 264, 298
BciT130I CCWGG 3 cut(s) 145, 530, 1125
BcnI CCSGG 6 cut(s) 110, 251, 252, 298, 437, 900
BfaI CTAG 2 cut(s) 270, 492
BfoI RGCGCY 1 cut(s) 261
BfrI CTTAAG 1 cut(s) 691
BfuAI ACCTGC 1 cut(s) 266
BglI GCCNNNNNGGC 1 cut(s) 266
BglII AGATCT 1 cut(s) 886
BisI GCNGC 7 cut(s) 41, 246, 256, 424, 803, 1139, 1161
BlsI GCNGC 7 cut(s) 42, 247, 257, 425, 804, 1140, 1162
Bme1390I CCNGG 9 cut(s) 110, 145, 251, 252, 298, 437, 530, 900, 1125
Bme18I GGWCC 5 cut(s) 132, 181, 214, 532, 784
BmeRI GACNNNNNGTC 2 cut(s) 34, 220
BmeT110I CYCGRG 2 cut(s) 250, 890
BmgT120I GGNCC 6 cut(s) 132, 147, 181, 214, 532, 784
BmiI GGNNCC 5 cut(s) 134, 174, 511, 684, 786
BmrFI CCNGG 9 cut(s) 110, 145, 251, 252, 298, 437, 530, 900, 1125
BmrI ACTGGG 2 cut(s) 369, 730
BmsI GCATC 5 cut(s) 217, 239, 862, 934, 1147
BmuI ACTGGG 2 cut(s) 369, 730
BpiI GAAGAC 2 cut(s) 551, 1107
BpmI CTGGAG 1 cut(s) 1173
Bpu10I CCTNAGC 1 cut(s) 806
BpuMI CCSGG 6 cut(s) 110, 251, 252, 298, 437, 900
Bsa29I ATCGAT 1 cut(s) 1261
BsaHI GRCGYC 3 cut(s) 35, 60, 318
BsaJI CCNNGG 6 cut(s) 88, 177, 190, 249, 250, 1274
BsaWI WCCGGW 1 cut(s) 235
BsaXI ACNNNNNCTCC 2 cut(s) 1239, 1269
Bsc4I CCNNNNNNNGG 3 cut(s) 94, 196, 925
Bse118I RCCGGY 2 cut(s) 235, 414
Bse1I ACTGG 7 cut(s) 220, 364, 725, 733, 952, 1239, 1253
BseBI CCWGG 3 cut(s) 145, 530, 1125
BseCI ATCGAT 1 cut(s) 1261
BseDI CCNNGG 6 cut(s) 88, 177, 190, 249, 250, 1274
BseGI GGATG 4 cut(s) 339, 370, 617, 1165
BseLI CCNNNNNNNGG 3 cut(s) 94, 196, 925
BseMII CTCAG 1 cut(s) 719
BseNI ACTGG 7 cut(s) 220, 364, 725, 733, 952, 1239, 1253
BsePI GCGCGC 1 cut(s) 812
BseXI GCAGC 5 cut(s) 52, 232, 267, 814, 1172
BseYI CCCAGC 1 cut(s) 329
BsgI GTGCAG 1 cut(s) 1191
Bsh1236I CGCG 3 cut(s) 120, 179, 814
Bsh1285I CGRYCG 1 cut(s) 1265
BshFI GGCC 2 cut(s) 148, 929
BshTI ACCGGT 1 cut(s) 235
BshVI ATCGAT 1 cut(s) 1261
BsiEI CGRYCG 1 cut(s) 1265
BsiHKAI GWGCWC 1 cut(s) 829
BsiHKCI CYCGRG 2 cut(s) 250, 890
BsiSI CCGG 8 cut(s) 110, 236, 251, 297, 415, 437, 507, 899
BslFI GGGAC 4 cut(s) 118, 726, 770, 1200
BslI CCNNNNNNNGG 3 cut(s) 94, 196, 925
BsmFI GGGAC 4 cut(s) 118, 726, 770, 1200
BsmI GAATGC 1 cut(s) 602
BsnI GGCC 2 cut(s) 148, 929
BsoBI CYCGRG 2 cut(s) 250, 890
Bsp1286I GDGCHC 1 cut(s) 829
Bsp143I GATC 5 cut(s) 209, 724, 886, 1258, 1262
Bsp19I CCATGG 1 cut(s) 1274
BspACI CCGC 8 cut(s) 51, 118, 153, 177, 179, 195, 423, 1138
BspANI GGCC 2 cut(s) 148, 929
BspCNI CTCAG 1 cut(s) 720
BspDI ATCGAT 1 cut(s) 1261
BspFNI CGCG 3 cut(s) 120, 179, 814
BspLI GGNNCC 5 cut(s) 134, 174, 511, 684, 786
BspMI ACCTGC 1 cut(s) 266
BspPI GGATC 3 cut(s) 217, 732, 1266
BspQI GCTCTTC 1 cut(s) 854
BspTI CTTAAG 1 cut(s) 691
BsrFI RCCGGY 2 cut(s) 235, 414
BsrI ACTGG 7 cut(s) 220, 364, 725, 733, 952, 1239, 1253
BssAI RCCGGY 2 cut(s) 235, 414
BssECI CCNNGG 6 cut(s) 88, 177, 190, 249, 250, 1274
BssHII GCGCGC 1 cut(s) 812
BssMI GATC 5 cut(s) 209, 724, 886, 1258, 1262
BssNI GRCGYC 3 cut(s) 35, 60, 318
BssT1I CCWWGG 2 cut(s) 88, 1274
Bst2UI CCWGG 3 cut(s) 145, 530, 1125
Bst4CI ACNGT 3 cut(s) 185, 191, 608
Bst6I CTCTTC 2 cut(s) 854, 1209
BstACI GRCGYC 3 cut(s) 35, 60, 318
BstAFI CTTAAG 1 cut(s) 691
BstC8I GCNNGC 3 cut(s) 412, 442, 814
BstDEI CTNAG 2 cut(s) 728, 806
BstDSI CCRYGG 3 cut(s) 177, 190, 1274
BstF5I GGATG 4 cut(s) 339, 370, 617, 1165
BstFNI CGCG 3 cut(s) 120, 179, 814
BstH2I RGCGCY 1 cut(s) 261
BstHHI GCGC 4 cut(s) 260, 814, 816, 1116
BstKTI GATC 5 cut(s) 212, 727, 889, 1261, 1265
BstMBI GATC 5 cut(s) 209, 724, 886, 1258, 1262
BstMCI CGRYCG 1 cut(s) 1265
BstMWI GCNNNNNNNGC 5 cut(s) 59, 266, 420, 811, 1169
BstNI CCWGG 3 cut(s) 145, 530, 1125
BstNSI RCATGY 2 cut(s) 410, 1193
BstSCI CCNGG 9 cut(s) 108, 143, 249, 250, 296, 435, 528, 898, 1123
BstUI CGCG 3 cut(s) 120, 179, 814
BstV1I GCAGC 5 cut(s) 52, 232, 267, 814, 1172
BstV2I GAAGAC 2 cut(s) 551, 1107
BstX2I RGATCY 2 cut(s) 724, 886
BstYI RGATCY 2 cut(s) 724, 886
Bsu15I ATCGAT 1 cut(s) 1261
BsuRI GGCC 2 cut(s) 148, 929
BsuTUI ATCGAT 1 cut(s) 1261
BtgI CCRYGG 3 cut(s) 177, 190, 1274
BtsCI GGATG 4 cut(s) 339, 370, 617, 1165
BtsI GCAGTG 1 cut(s) 776
BtsIMutI CAGTG 7 cut(s) 357, 740, 776, 829, 1188, 1260, 1289
BveI ACCTGC 1 cut(s) 266
Cac8I GCNNGC 3 cut(s) 412, 442, 814
CfoI GCGC 4 cut(s) 260, 814, 816, 1116
Cfr10I RCCGGY 2 cut(s) 235, 414
Cfr13I GGNCC 6 cut(s) 132, 147, 181, 214, 532, 784
Cfr42I CCGCGG 1 cut(s) 180
Cfr9I CCCGGG 1 cut(s) 250
ClaI ATCGAT 1 cut(s) 1261
CpoI CGGWCCG 1 cut(s) 181
CseI GACGC 2 cut(s) 24, 68
CsiI ACCWGGT 2 cut(s) 528, 1123
Csp6I GTAC 2 cut(s) 418, 1121
CspAI ACCGGT 1 cut(s) 235
CspI CGGWCCG 1 cut(s) 181
CviAII CATG 4 cut(s) 407, 1173, 1190, 1275
CviQI GTAC 2 cut(s) 418, 1121
DdeI CTNAG 2 cut(s) 728, 806
DpnI GATC 5 cut(s) 211, 726, 888, 1260, 1264
DpnII GATC 5 cut(s) 209, 724, 886, 1258, 1262
DriI GACNNNNNGTC 2 cut(s) 34, 220
Eam1104I CTCTTC 2 cut(s) 854, 1209
Eam1105I GACNNNNNGTC 2 cut(s) 34, 220
EarI CTCTTC 2 cut(s) 854, 1209
Eco130I CCWWGG 2 cut(s) 88, 1274
Eco47I GGWCC 5 cut(s) 132, 181, 214, 532, 784
Eco57I CTGAAG 2 cut(s) 141, 1265
Eco88I CYCGRG 2 cut(s) 250, 890
EcoO109I RGGNCCY 1 cut(s) 784
EcoRI GAATTC 1 cut(s) 77
EcoRII CCWGG 3 cut(s) 143, 528, 1123
EcoT14I CCWWGG 2 cut(s) 88, 1274
EcoT22I ATGCAT 2 cut(s) 232, 706
ErhI CCWWGG 2 cut(s) 88, 1274
FaeI CATG 4 cut(s) 410, 1176, 1193, 1278
FaiI YATR 9 cut(s) 408, 516, 564, 716, 939, 999, 1174, 1191, 1276
FalI AAGNNNNNCTT 2 cut(s) 543, 575
FaqI GGGAC 4 cut(s) 118, 726, 770, 1200
FatI CATG 4 cut(s) 406, 1172, 1189, 1274
FauI CCCGC 2 cut(s) 184, 188
Fnu4HI GCNGC 7 cut(s) 41, 246, 256, 424, 803, 1139, 1161
FokI GGATG 4 cut(s) 346, 377, 624, 1152
Fsp4HI GCNGC 7 cut(s) 41, 246, 256, 424, 803, 1139, 1161
FspBI CTAG 2 cut(s) 270, 492
GlaI GCGC 4 cut(s) 259, 813, 815, 1115
GluI GCNGC 7 cut(s) 41, 246, 256, 424, 803, 1139, 1161
GsaI CCCAGC 1 cut(s) 333
GsuI CTGGAG 1 cut(s) 1173
HaeII RGCGCY 1 cut(s) 261
HaeIII GGCC 2 cut(s) 148, 929
HapII CCGG 8 cut(s) 110, 236, 251, 297, 415, 437, 507, 899
HgaI GACGC 2 cut(s) 24, 68
HhaI GCGC 4 cut(s) 260, 814, 816, 1116
Hin1I GRCGYC 3 cut(s) 35, 60, 318
Hin1II CATG 4 cut(s) 410, 1176, 1193, 1278
Hin6I GCGC 4 cut(s) 258, 812, 814, 1114
HinP1I GCGC 4 cut(s) 258, 812, 814, 1114
HincII GTYRAC 2 cut(s) 316, 1203
HindII GTYRAC 2 cut(s) 316, 1203
HinfI GANTC 6 cut(s) 5, 127, 161, 204, 523, 1016
HpaI GTTAAC 1 cut(s) 1203
HpaII CCGG 8 cut(s) 110, 236, 251, 297, 415, 437, 507, 899
HphI GGTGA 3 cut(s) 225, 518, 1139
Hpy166II GTNNAC 4 cut(s) 316, 907, 1092, 1203
Hpy188I TCNGA 9 cut(s) 160, 172, 209, 214, 226, 474, 536, 729, 793
Hpy188III TCNNGA 4 cut(s) 869, 890, 892, 1152
Hpy8I GTNNAC 4 cut(s) 316, 907, 1092, 1203
Hpy99I CGWCG 1 cut(s) 40
HpyAV CCTTC 4 cut(s) 79, 474, 638, 703
HpyCH4III ACNGT 3 cut(s) 185, 191, 608
HpyCH4IV ACGT 2 cut(s) 318, 503
HpyCH4V TGCA 7 cut(s) 230, 704, 769, 971, 1160, 1208, 1223
HpyF10VI GCNNNNNNNGC 5 cut(s) 59, 266, 420, 811, 1169
HpyF3I CTNAG 2 cut(s) 728, 806
HpySE526I ACGT 2 cut(s) 318, 503
Hsp92I GRCGYC 3 cut(s) 35, 60, 318
Hsp92II CATG 4 cut(s) 410, 1176, 1193, 1278
HspAI GCGC 4 cut(s) 258, 812, 814, 1114
KspAI GTTAAC 1 cut(s) 1203
KspI CCGCGG 1 cut(s) 180
Kzo9I GATC 5 cut(s) 209, 724, 886, 1258, 1262
LguI GCTCTTC 1 cut(s) 854
LmnI GCTCC 2 cut(s) 515, 799
Lsp1109I GCAGC 5 cut(s) 52, 232, 267, 814, 1172
LweI GCATC 5 cut(s) 217, 239, 862, 934, 1147
MabI ACCWGGT 2 cut(s) 528, 1123
MaeI CTAG 2 cut(s) 270, 492
MaeII ACGT 2 cut(s) 318, 503
MaeIII GTNAC 3 cut(s) 185, 290, 1036
MalI GATC 5 cut(s) 211, 726, 888, 1260, 1264
MboI GATC 5 cut(s) 209, 724, 886, 1258, 1262
MboII GAAGA 8 cut(s) 551, 662, 860, 871, 896, 953, 1112, 1226
MflI RGATCY 2 cut(s) 724, 886
MhlI GDGCHC 1 cut(s) 829
MluCI AATT 5 cut(s) 77, 346, 373, 487, 1041
MlyI GAGTC 1 cut(s) 213
MmeI TCCRAC 3 cut(s) 150, 187, 452
MnlI CCTC 6 cut(s) 32, 83, 88, 346, 444, 1210
Mph1103I ATGCAT 2 cut(s) 232, 706
MroXI GAANNNNTTC 1 cut(s) 479
MseI TTAA 7 cut(s) 345, 692, 699, 780, 981, 1062, 1202
MspA1I CMGCKG 2 cut(s) 179, 245
MspCI CTTAAG 1 cut(s) 691
MspI CCGG 8 cut(s) 110, 236, 251, 297, 415, 437, 507, 899
MspR9I CCNGG 9 cut(s) 110, 145, 251, 252, 298, 437, 530, 900, 1125
Mva1269I GAATGC 1 cut(s) 602
MvaI CCWGG 3 cut(s) 145, 530, 1125
MvnI CGCG 3 cut(s) 120, 179, 814
MwoI GCNNNNNNNGC 5 cut(s) 59, 266, 420, 811, 1169
NciI CCSGG 6 cut(s) 110, 251, 252, 298, 437, 900
NcoI CCATGG 1 cut(s) 1274
NdeII GATC 5 cut(s) 209, 724, 886, 1258, 1262
NlaIII CATG 4 cut(s) 410, 1176, 1193, 1278
NlaIV GGNNCC 5 cut(s) 134, 174, 511, 684, 786
NmuCI GTSAC 2 cut(s) 185, 1036
NsiI ATGCAT 2 cut(s) 232, 706
NspI RCATGY 2 cut(s) 410, 1193
PaeR7I CTCGAG 1 cut(s) 890
PalAI GGCGCGCC 1 cut(s) 812
PaqCI CACCTGC 1 cut(s) 266
PauI GCGCGC 1 cut(s) 812
PciI ACATGT 1 cut(s) 1189
PciSI GCTCTTC 1 cut(s) 854
PcsI WCGNNNNNNNCGW 3 cut(s) 375, 407, 437
PctI GAATGC 1 cut(s) 602
PdmI GAANNNNTTC 1 cut(s) 479
PfeI GAWTC 5 cut(s) 5, 127, 161, 523, 1016
PflFI GACNNNGTC 1 cut(s) 1034
PflMI CCANNNNNTGG 1 cut(s) 925
PinAI ACCGGT 1 cut(s) 235
PkrI GCNGC 7 cut(s) 42, 247, 257, 425, 804, 1140, 1162
Ple19I CGATCG 1 cut(s) 1265
PleI GAGTC 1 cut(s) 212
PpsI GAGTC 1 cut(s) 212
PpuMI RGGWCCY 1 cut(s) 784
PscI ACATGT 1 cut(s) 1189
Psp5II RGGWCCY 1 cut(s) 784
Psp6I CCWGG 3 cut(s) 143, 528, 1123
PspFI CCCAGC 1 cut(s) 329
PspGI CCWGG 3 cut(s) 143, 528, 1123
PspN4I GGNNCC 5 cut(s) 134, 174, 511, 684, 786
PspPI GGNCC 6 cut(s) 132, 147, 181, 214, 532, 784
PspPPI RGGWCCY 1 cut(s) 784
PsuI RGATCY 2 cut(s) 724, 886
PsyI GACNNNGTC 1 cut(s) 1034
PteI GCGCGC 1 cut(s) 812
PvuI CGATCG 1 cut(s) 1265
PvuII CAGCTG 1 cut(s) 245
RsaI GTAC 2 cut(s) 419, 1122
RsaNI GTAC 2 cut(s) 418, 1121
Rsr2I CGGWCCG 1 cut(s) 181
RsrII CGGWCCG 1 cut(s) 181
SacII CCGCGG 1 cut(s) 180
SapI GCTCTTC 1 cut(s) 854
SaqAI TTAA 7 cut(s) 345, 692, 699, 780, 981, 1062, 1202
SatI GCNGC 7 cut(s) 41, 246, 256, 424, 803, 1139, 1161
Sau3AI GATC 5 cut(s) 209, 724, 886, 1258, 1262
Sau96I GGNCC 6 cut(s) 132, 147, 181, 214, 532, 784
SchI GAGTC 1 cut(s) 213
ScrFI CCNGG 9 cut(s) 110, 145, 251, 252, 298, 437, 530, 900, 1125
SduI GDGCHC 1 cut(s) 829
SexAI ACCWGGT 2 cut(s) 528, 1123
SfaNI GCATC 5 cut(s) 217, 239, 862, 934, 1147
Sfr274I CTCGAG 1 cut(s) 890
Sfr303I CCGCGG 1 cut(s) 180
SgrBI CCGCGG 1 cut(s) 180
SgsI GGCGCGCC 1 cut(s) 812
SinI GGWCC 5 cut(s) 132, 181, 214, 532, 784
SlaI CTCGAG 1 cut(s) 890
SmaI CCCGGG 1 cut(s) 252
SmlI CTYRAG 2 cut(s) 691, 890
SmoI CTYRAG 2 cut(s) 691, 890
Sse9I AATT 5 cut(s) 77, 346, 373, 487, 1041
SsiI CCGC 8 cut(s) 51, 118, 153, 177, 179, 195, 423, 1138
SspMI CTAG 2 cut(s) 270, 492
StyD4I CCNGG 9 cut(s) 108, 143, 249, 250, 296, 435, 528, 898, 1123
StyI CCWWGG 2 cut(s) 88, 1274
TaaI ACNGT 3 cut(s) 185, 191, 608
TaiI ACGT 2 cut(s) 321, 506
TaqI TCGA 4 cut(s) 75, 431, 891, 1261
TaqII GACCGA 1 cut(s) 120
TasI AATT 5 cut(s) 77, 346, 373, 487, 1041
TauI GCSGC 2 cut(s) 426, 1141
TfiI GAWTC 5 cut(s) 5, 127, 161, 523, 1016
Tru1I TTAA 7 cut(s) 345, 692, 699, 780, 981, 1062, 1202
Tru9I TTAA 7 cut(s) 345, 692, 699, 780, 981, 1062, 1202
TscAI CASTG 7 cut(s) 364, 740, 776, 829, 1188, 1260, 1289
TseFI GTSAC 2 cut(s) 185, 1036
TseI GCWGC 5 cut(s) 40, 245, 255, 802, 1160
Tsp45I GTSAC 2 cut(s) 185, 1036
TspDTI ATGAA 5 cut(s) 551, 731, 927, 954, 1025
TspGWI ACGGA 1 cut(s) 416
TspMI CCCGGG 1 cut(s) 250
TspRI CASTG 7 cut(s) 364, 740, 776, 829, 1188, 1260, 1289
Tth111I GACNNNGTC 1 cut(s) 1034
Van91I CCANNNNNTGG 1 cut(s) 925
Vha464I CTTAAG 1 cut(s) 691
VpaK11BI GGWCC 5 cut(s) 132, 181, 214, 532, 784
XapI RAATTY 1 cut(s) 77
XceI RCATGY 2 cut(s) 410, 1193
XhoI CTCGAG 1 cut(s) 890
XmaI CCCGGG 1 cut(s) 250
XmnI GAANNNNTTC 1 cut(s) 479
XspI CTAG 2 cut(s) 270, 492
ZraI GACGTC 1 cut(s) 319
Zsp2I ATGCAT 2 cut(s) 232, 706
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.