pycom17g02910

Phosphoenolpyruvate phosphate translocator 2

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr17
N/A
Physical Location & Seq
Forward (+)
1924534 .. 1926340
1807 bp
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UTR
Exon/CDS
Intron
N/A

Sequence Viewer

Length: 462 bp
ATGCAGAGCACTGCGCTTGCTGTGTCTCCTTCCACCTCGTTTCTCAAACCTCCGTGTCGAAACTCTTTTCTTAATGCCTCTCAGCTTTCACCCTCAACGTCCTTCATACAAGTTGACAATCTGACTAAAGTTCAAAGGCCGAGTATTTGGGTGGTTTCTTCTCTTGTACCGATTGTAGGTGGAGTGGCATTGGCATCTTTCACCGAGGCCTCTTTTAAATGGATCGGTTTCGGTAGTGCAATGGCCTCTAATGTTACAAACCAATCACGTAATGAATCTTTGGACAATATCAATCTCTTCTCAGTGATCACTATCATTTCCTTCATCCTGTTGGTTCCTTCGGCGATTCTATTGGAAGGCGTTAAATTTACTCCTTCTTACCTGCACTCTGCAAACCAAGGATTGAATATCAAAGAGTTATGCGTAAGATCACTTCTGGCTGGCTTCTGCTTCCACACTTGA

Protein Analysis

154

Amino Acids

16.47

Weight (kDa)

8.99

Isoelectric Point (pI)

42.44

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
TPT PF03151 45 - 152 3.9e-28 Triose-phosphate Transporter family
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Orthologous Genes

No orthologs found for this gene in the current database.

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 1 cut(s) 390
AclWI GGATC 1 cut(s) 230
AcsI RAATTY 1 cut(s) 365
AfaI GTAC 1 cut(s) 168
AfiI CCNNNNNNNGG 1 cut(s) 176
AgsI TTSAA 2 cut(s) 134, 406
AluBI AGCT 1 cut(s) 85
AluI AGCT 1 cut(s) 85
Alw21I GWGCWC 1 cut(s) 11
Alw26I GTCTC 1 cut(s) 30
AlwI GGATC 1 cut(s) 230
AoxI GGCC 3 cut(s) 137, 207, 243
ApoI RAATTY 1 cut(s) 365
AspLEI GCGC 1 cut(s) 16
AsuHPI GGTGA 2 cut(s) 81, 193
BarI GAAGNNNNNNTAC 2 cut(s) 417, 449
Bbv12I GWGCWC 1 cut(s) 11
BclI TGATCA 1 cut(s) 306
BcoDI GTCTC 1 cut(s) 30
BfuAI ACCTGC 1 cut(s) 390
BmiI GGNNCC 1 cut(s) 336
BmsI GCATC 1 cut(s) 203
BsaAI YACGTR 1 cut(s) 269
BsaBI GATNNNNATC 1 cut(s) 311
BsaJI CCNNGG 2 cut(s) 204, 397
Bsc4I CCNNNNNNNGG 1 cut(s) 176
Bse3DI GCAATG 1 cut(s) 246
Bse8I GATNNNNATC 1 cut(s) 311
BseDI CCNNGG 2 cut(s) 204, 397
BseGI GGATG 1 cut(s) 324
BseJI GATNNNNATC 1 cut(s) 311
BseLI CCNNNNNNNGG 1 cut(s) 176
BseMI GCAATG 1 cut(s) 246
BseMII CTCAG 2 cut(s) 95, 315
BsgI GTGCAG 1 cut(s) 368
BshFI GGCC 3 cut(s) 139, 209, 245
BsiHKAI GWGCWC 1 cut(s) 11
BslI CCNNNNNNNGG 1 cut(s) 176
BsmAI GTCTC 1 cut(s) 30
BsnI GGCC 3 cut(s) 139, 209, 245
Bsp1286I GDGCHC 1 cut(s) 11
Bsp143I GATC 3 cut(s) 222, 306, 428
BspANI GGCC 3 cut(s) 139, 209, 245
BspCNI CTCAG 2 cut(s) 94, 314
BspLI GGNNCC 1 cut(s) 336
BspMI ACCTGC 1 cut(s) 390
BspPI GGATC 1 cut(s) 230
BsrDI GCAATG 1 cut(s) 246
BssECI CCNNGG 2 cut(s) 204, 397
BssMI GATC 3 cut(s) 222, 306, 428
BssT1I CCWWGG 1 cut(s) 397
Bst6I CTCTTC 1 cut(s) 302
BstBAI YACGTR 1 cut(s) 269
BstC8I GCNNGC 2 cut(s) 18, 442
BstDEI CTNAG 2 cut(s) 81, 301
BstF5I GGATG 1 cut(s) 324
BstHHI GCGC 1 cut(s) 16
BstKTI GATC 3 cut(s) 225, 309, 431
BstMAI GTCTC 1 cut(s) 30
BstMBI GATC 3 cut(s) 222, 306, 428
BsuRI GGCC 3 cut(s) 139, 209, 245
BtsCI GGATG 1 cut(s) 324
BtsI GCAGTG 1 cut(s) 9
BtsIMutI CAGTG 2 cut(s) 9, 309
BveI ACCTGC 1 cut(s) 390
Cac8I GCNNGC 2 cut(s) 18, 442
CfoI GCGC 1 cut(s) 16
Csp6I GTAC 1 cut(s) 167
CviJI RGCY 6 cut(s) 85, 139, 209, 245, 440, 444
CviKI_1 RGCY 6 cut(s) 85, 139, 209, 245, 440, 444
CviQI GTAC 1 cut(s) 167
DdeI CTNAG 2 cut(s) 81, 301
DpnI GATC 3 cut(s) 224, 308, 430
DpnII GATC 3 cut(s) 222, 306, 428
DraI TTTAAA 1 cut(s) 217
Eam1104I CTCTTC 1 cut(s) 302
EarI CTCTTC 1 cut(s) 302
Eco130I CCWWGG 1 cut(s) 397
Eco147I AGGCCT 1 cut(s) 209
EcoT14I CCWWGG 1 cut(s) 397
ErhI CCWWGG 1 cut(s) 397
FaiI YATR 2 cut(s) 107, 421
FbaI TGATCA 1 cut(s) 306
FokI GGATG 1 cut(s) 311
GlaI GCGC 1 cut(s) 15
HaeIII GGCC 3 cut(s) 139, 209, 245
HhaI GCGC 1 cut(s) 16
Hin6I GCGC 1 cut(s) 14
HinP1I GCGC 1 cut(s) 14
HincII GTYRAC 1 cut(s) 115
HindII GTYRAC 1 cut(s) 115
HinfI GANTC 2 cut(s) 275, 346
HphI GGTGA 2 cut(s) 81, 193
Hpy166II GTNNAC 1 cut(s) 115
Hpy188I TCNGA 1 cut(s) 123
Hpy8I GTNNAC 1 cut(s) 115
HpyAV CCTTC 6 cut(s) 39, 112, 331, 348, 350, 384
HpyCH4IV ACGT 2 cut(s) 98, 268
HpyCH4V TGCA 4 cut(s) 4, 239, 385, 392
HpyF3I CTNAG 2 cut(s) 81, 301
HpySE526I ACGT 2 cut(s) 98, 268
HspAI GCGC 1 cut(s) 14
Ksp22I TGATCA 1 cut(s) 306
Kzo9I GATC 3 cut(s) 222, 306, 428
LpnPI CCDG 4 cut(s) 341, 395, 422, 426
LweI GCATC 1 cut(s) 203
MaeII ACGT 2 cut(s) 98, 268
MaeIII GTNAC 1 cut(s) 253
MalI GATC 3 cut(s) 224, 308, 430
MboI GATC 3 cut(s) 222, 306, 428
MboII GAAGA 2 cut(s) 150, 289
MhlI GDGCHC 1 cut(s) 11
MluCI AATT 1 cut(s) 365
MnlI CCTC 7 cut(s) 46, 60, 88, 103, 199, 220, 256
MseI TTAA 3 cut(s) 72, 216, 363
NdeII GATC 3 cut(s) 222, 306, 428
NlaIV GGNNCC 1 cut(s) 336
NmeAIII GCCGAG 1 cut(s) 165
PceI AGGCCT 1 cut(s) 209
PfeI GAWTC 2 cut(s) 275, 346
Ppu21I YACGTR 1 cut(s) 269
PspN4I GGNNCC 1 cut(s) 336
RsaI GTAC 1 cut(s) 168
RsaNI GTAC 1 cut(s) 167
SaqAI TTAA 3 cut(s) 72, 216, 363
Sau3AI GATC 3 cut(s) 222, 306, 428
SduI GDGCHC 1 cut(s) 11
SetI ASST 7 cut(s) 38, 52, 87, 101, 181, 271, 384
SfaNI GCATC 1 cut(s) 203
Sse9I AATT 1 cut(s) 365
SseBI AGGCCT 1 cut(s) 209
StuI AGGCCT 1 cut(s) 209
StyI CCWWGG 1 cut(s) 397
TaiI ACGT 2 cut(s) 101, 271
TaqI TCGA 1 cut(s) 58
TasI AATT 1 cut(s) 365
TfiI GAWTC 2 cut(s) 275, 346
Tru1I TTAA 3 cut(s) 72, 216, 363
Tru9I TTAA 3 cut(s) 72, 216, 363
TscAI CASTG 2 cut(s) 16, 309
TspDTI ATGAA 3 cut(s) 94, 288, 313
TspGWI ACGGA 1 cut(s) 42
TspRI CASTG 2 cut(s) 16, 309
XapI RAATTY 1 cut(s) 365
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.