pycom17g05510

Contains the following InterPro domains Protein kinase, catalytic domain (InterPro IPR000719), Serine-threonine tyrosine-protein kinase (InterPro IPR001245), Serine threonine protein kinase-like, ATMRK (InterPro IPR015783), Protein kinase-like domain (InterPro IPR011009), Serine threonine-protein kinase, active site (InterPro IPR008271)

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr17
N/A
Physical Location & Seq
Forward (+)
3920381 .. 3921932
1552 bp
Loading structure...
UTR
Exon/CDS
Intron
N/A

Sequence Viewer

Length: 759 bp
ATGTCCCCAGAGGTTCTAGATCCTTATAATGAAAGATGGGATGTCTATAGTCTTGGCATGTGTTTATGGGAAATTTATTGTTGTGACATGCCTTACCCAGACGTTGACTTTGCTAATGTATTATTTCAAGTTGTTCGCCAAAATTTACAGCCAGACTACAACATATGTATAACCAATTCGAGATTGAAAAGTTACATGAAACTTCAACTTAAGCACATAAATTTCAAGGATACATTAGTTCTTCTGCGTCAAATATTCCAAAACTTGATTGAGCACCTTCTCAGATTTCCCACCGAGGGCAATAGCCTTTTTAGCATCTTCCCCCACCTTCCTAGCCAAACCCCTCAGCTTCTTATCCTCCATCAACTCCACAATCTTCCTCCCTATCTCTTCCCCACCCACCACCCCCCCAACCACACAACCACAACTCCTCTCCCATATTTCCAACCCCGCCTTCTCCACCACCTCCGCATTCACGCTCTGATCCCCTTGCTGCGGCCAGGCCAGCACCGGCACCCCTTTTCTTGCCGCCTCCATAACCGAATTCCACCCGCAGTGATTCACAAACCCGCCAACAGCCACGTGCTCGGGAATGTCCTGATGGCTCACCCACCCCTTCACTACTACTCCCCTGCCTTTTGTTCTGTCCAAAAAGGGCTCCCCAAGCCGGTCTTTCAGATCTTCCTTGTCGTCTTTGTCGACCTTACTTGTTTTGAGCACCCACAGAAACCTATATCCACTCCTCTCCAACCCATCTGA

Protein Analysis

253

Amino Acids

29.41

Weight (kDa)

8.84

Isoelectric Point (pI)

58.06

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Orthologous Genes

No orthologs found for this gene in the current database.

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 27
AccB1I GGYRCC 1 cut(s) 513
AccI GTMKAC 1 cut(s) 699
AciI CCGC 6 cut(s) 451, 469, 496, 529, 552, 570
AclWI GGATC 2 cut(s) 14, 478
AcoI YGGCCR 1 cut(s) 497
AcsI RAATTY 4 cut(s) 72, 142, 220, 543
AcvI CACGTG 1 cut(s) 583
AfiI CCNNNNNNNGG 3 cut(s) 296, 495, 667
AflII CTTAAG 1 cut(s) 209
AgsI TTSAA 4 cut(s) 128, 187, 206, 226
AjnI CCWGG 1 cut(s) 499
AjuI GAANNNNNNNTTGG 2 cut(s) 438, 470
AluBI AGCT 1 cut(s) 349
AluI AGCT 1 cut(s) 349
Alw21I GWGCWC 3 cut(s) 276, 588, 720
AlwI GGATC 2 cut(s) 14, 478
Ama87I CYCGRG 1 cut(s) 587
AoxI GGCC 2 cut(s) 497, 502
ApeKI GCWGC 1 cut(s) 493
ApoI RAATTY 4 cut(s) 72, 142, 220, 543
ArsI GACNNNNNNTTYG 2 cut(s) 92, 124
AsuHPI GGTGA 1 cut(s) 599
AvaI CYCGRG 1 cut(s) 587
BaeI ACNNNNGTAYC 2 cut(s) 222, 255
BanI GGYRCC 1 cut(s) 513
BanII GRGCYC 1 cut(s) 660
BbrPI CACGTG 1 cut(s) 583
Bbv12I GWGCWC 3 cut(s) 276, 588, 720
BbvCI CCTCAGC 1 cut(s) 345
BbvI GCAGC 1 cut(s) 480
BccI CCATC 3 cut(s) 30, 369, 595
BciT130I CCWGG 1 cut(s) 501
BciVI GTATCC 1 cut(s) 223
BfaI CTAG 2 cut(s) 17, 333
BfmI CTRYAG 1 cut(s) 46
BfrI CTTAAG 1 cut(s) 209
BfuI GTATCC 1 cut(s) 223
BglII AGATCT 1 cut(s) 678
BisI GCNGC 3 cut(s) 494, 497, 529
BlsI GCNGC 3 cut(s) 495, 498, 530
Bme1390I CCNGG 1 cut(s) 501
BmeT110I CYCGRG 1 cut(s) 587
BmiI GGNNCC 2 cut(s) 515, 659
BmrFI CCNGG 1 cut(s) 501
BmsI GCATC 1 cut(s) 324
Bpu10I CCTNAGC 1 cut(s) 345
BsaAI YACGTR 1 cut(s) 583
BsaJI CCNNGG 1 cut(s) 294
BsaXI ACNNNNNCTCC 4 cut(s) 412, 442, 611, 641
Bsc4I CCNNNNNNNGG 3 cut(s) 296, 495, 667
Bse118I RCCGGY 2 cut(s) 510, 667
BseBI CCWGG 1 cut(s) 501
BseDI CCNNGG 1 cut(s) 294
BseGI GGATG 1 cut(s) 46
BseLI CCNNNNNNNGG 3 cut(s) 296, 495, 667
BseMII CTCAG 2 cut(s) 295, 359
BseRI GAGGAG 2 cut(s) 420, 732
BseXI GCAGC 1 cut(s) 480
BshFI GGCC 2 cut(s) 499, 504
BshNI GGYRCC 1 cut(s) 513
BsiHKAI GWGCWC 3 cut(s) 276, 588, 720
BsiHKCI CYCGRG 1 cut(s) 587
BsiSI CCGG 2 cut(s) 511, 668
BslI CCNNNNNNNGG 3 cut(s) 296, 495, 667
BsmI GAATGC 1 cut(s) 471
BsnI GGCC 2 cut(s) 499, 504
BsoBI CYCGRG 1 cut(s) 587
Bsp1286I GDGCHC 4 cut(s) 276, 588, 660, 720
Bsp143I GATC 3 cut(s) 19, 483, 678
BspACI CCGC 6 cut(s) 451, 469, 496, 529, 552, 570
BspANI GGCC 2 cut(s) 499, 504
BspCNI CTCAG 2 cut(s) 294, 358
BspLI GGNNCC 2 cut(s) 515, 659
BspPI GGATC 2 cut(s) 14, 478
BspT107I GGYRCC 1 cut(s) 513
BspTI CTTAAG 1 cut(s) 209
BsrFI RCCGGY 2 cut(s) 510, 667
BssAI RCCGGY 2 cut(s) 510, 667
BssECI CCNNGG 1 cut(s) 294
BssMI GATC 3 cut(s) 19, 483, 678
Bst2UI CCWGG 1 cut(s) 501
Bst6I CTCTTC 1 cut(s) 395
BstAFI CTTAAG 1 cut(s) 209
BstBAI YACGTR 1 cut(s) 583
BstC8I GCNNGC 1 cut(s) 506
BstDEI CTNAG 2 cut(s) 281, 345
BstF5I GGATG 1 cut(s) 46
BstKTI GATC 3 cut(s) 22, 486, 681
BstMBI GATC 3 cut(s) 19, 483, 678
BstMWI GCNNNNNNNGC 3 cut(s) 312, 505, 664
BstNI CCWGG 1 cut(s) 501
BstNSI RCATGY 2 cut(s) 61, 91
BstSCI CCNGG 1 cut(s) 499
BstSFI CTRYAG 1 cut(s) 46
BstV1I GCAGC 1 cut(s) 480
BstX2I RGATCY 2 cut(s) 19, 678
BstYI RGATCY 2 cut(s) 19, 678
BsuI GTATCC 1 cut(s) 223
BsuRI GGCC 2 cut(s) 499, 504
BtsCI GGATG 1 cut(s) 46
BtsI GCAGTG 1 cut(s) 561
BtsIMutI CAGTG 1 cut(s) 561
Cac8I GCNNGC 1 cut(s) 506
Cfr10I RCCGGY 2 cut(s) 510, 667
CseI GACGC 1 cut(s) 236
CviAII CATG 3 cut(s) 58, 88, 196
DdeI CTNAG 2 cut(s) 281, 345
DpnI GATC 3 cut(s) 21, 485, 680
DpnII GATC 3 cut(s) 19, 483, 678
EaeI YGGCCR 1 cut(s) 497
Eam1104I CTCTTC 1 cut(s) 395
EarI CTCTTC 1 cut(s) 395
Eco24I GRGCYC 1 cut(s) 660
Eco72I CACGTG 1 cut(s) 583
Eco88I CYCGRG 1 cut(s) 587
EcoRI GAATTC 1 cut(s) 543
EcoRII CCWGG 1 cut(s) 499
EcoT38I GRGCYC 1 cut(s) 660
FaeI CATG 3 cut(s) 61, 91, 199
FalI AAGNNNNNCTT 2 cut(s) 656, 688
FatI CATG 3 cut(s) 57, 87, 195
FauI CCCGC 3 cut(s) 458, 559, 577
FauNDI CATATG 1 cut(s) 164
FblI GTMKAC 1 cut(s) 699
Fnu4HI GCNGC 3 cut(s) 494, 497, 529
FokI GGATG 1 cut(s) 53
FriOI GRGCYC 1 cut(s) 660
Fsp4HI GCNGC 3 cut(s) 494, 497, 529
FspBI CTAG 2 cut(s) 17, 333
GluI GCNGC 3 cut(s) 494, 497, 529
HaeIII GGCC 2 cut(s) 499, 504
HapII CCGG 2 cut(s) 511, 668
HgaI GACGC 1 cut(s) 236
Hin1II CATG 3 cut(s) 61, 91, 199
HincII GTYRAC 2 cut(s) 106, 700
HindII GTYRAC 2 cut(s) 106, 700
HinfI GANTC 1 cut(s) 559
HpaII CCGG 2 cut(s) 511, 668
HphI GGTGA 1 cut(s) 599
Hpy166II GTNNAC 2 cut(s) 106, 700
Hpy188I TCNGA 4 cut(s) 284, 483, 678, 758
Hpy188III TCNNGA 4 cut(s) 17, 180, 589, 598
Hpy8I GTNNAC 2 cut(s) 106, 700
HpyAV CCTTC 4 cut(s) 287, 338, 464, 626
HpyCH4IV ACGT 2 cut(s) 102, 582
HpyF10VI GCNNNNNNNGC 3 cut(s) 312, 505, 664
HpyF3I CTNAG 2 cut(s) 281, 345
HpySE526I ACGT 2 cut(s) 102, 582
Hsp92II CATG 3 cut(s) 61, 91, 199
Kzo9I GATC 3 cut(s) 19, 483, 678
LmnI GCTCC 1 cut(s) 663
Lsp1109I GCAGC 1 cut(s) 480
LweI GCATC 1 cut(s) 324
MaeI CTAG 2 cut(s) 17, 333
MaeII ACGT 2 cut(s) 102, 582
MaeIII GTNAC 2 cut(s) 83, 191
MalI GATC 3 cut(s) 21, 485, 680
MboI GATC 3 cut(s) 19, 483, 678
MboII GAAGA 5 cut(s) 233, 310, 368, 382, 673
MflI RGATCY 2 cut(s) 19, 678
MhlI GDGCHC 4 cut(s) 276, 588, 660, 720
MluCI AATT 5 cut(s) 72, 142, 175, 220, 543
MmeI TCCRAC 1 cut(s) 469
MnlI CCTC 9 cut(s) 4, 289, 354, 368, 390, 441, 476, 542, 753
MseI TTAA 1 cut(s) 210
MspCI CTTAAG 1 cut(s) 209
MspI CCGG 2 cut(s) 511, 668
MspR9I CCNGG 1 cut(s) 501
Mva1269I GAATGC 1 cut(s) 471
MvaI CCWGG 1 cut(s) 501
MwoI GCNNNNNNNGC 3 cut(s) 312, 505, 664
NdeI CATATG 1 cut(s) 164
NdeII GATC 3 cut(s) 19, 483, 678
NlaIII CATG 3 cut(s) 61, 91, 199
NlaIV GGNNCC 2 cut(s) 515, 659
NmuCI GTSAC 1 cut(s) 83
NspI RCATGY 2 cut(s) 61, 91
PcsI WCGNNNNNNNCGW 1 cut(s) 696
PctI GAATGC 1 cut(s) 471
PfeI GAWTC 1 cut(s) 559
PkrI GCNGC 3 cut(s) 495, 498, 530
PmaCI CACGTG 1 cut(s) 583
PmlI CACGTG 1 cut(s) 583
Ppu21I YACGTR 1 cut(s) 583
PsiI TTATAA 1 cut(s) 27
Psp6I CCWGG 1 cut(s) 499
PspCI CACGTG 1 cut(s) 583
PspGI CCWGG 1 cut(s) 499
PspN4I GGNNCC 2 cut(s) 515, 659
PsuI RGATCY 2 cut(s) 19, 678
SalI GTCGAC 1 cut(s) 698
SaqAI TTAA 1 cut(s) 210
SatI GCNGC 3 cut(s) 494, 497, 529
Sau3AI GATC 3 cut(s) 19, 483, 678
ScrFI CCNGG 1 cut(s) 501
SduI GDGCHC 4 cut(s) 276, 588, 660, 720
SetI ASST 9 cut(s) 15, 105, 279, 330, 351, 468, 585, 705, 733
SfaNI GCATC 1 cut(s) 324
SfcI CTRYAG 1 cut(s) 46
SmlI CTYRAG 1 cut(s) 209
SmoI CTYRAG 1 cut(s) 209
Sse9I AATT 5 cut(s) 72, 142, 175, 220, 543
SsiI CCGC 6 cut(s) 451, 469, 496, 529, 552, 570
SspI AATATT 1 cut(s) 255
SspMI CTAG 2 cut(s) 17, 333
StyD4I CCNGG 1 cut(s) 499
TaiI ACGT 2 cut(s) 105, 585
TaqI TCGA 2 cut(s) 179, 699
TasI AATT 5 cut(s) 72, 142, 175, 220, 543
TauI GCSGC 2 cut(s) 499, 531
TfiI GAWTC 1 cut(s) 559
Tru1I TTAA 1 cut(s) 210
Tru9I TTAA 1 cut(s) 210
TscAI CASTG 1 cut(s) 561
TseFI GTSAC 1 cut(s) 83
TseI GCWGC 1 cut(s) 493
Tsp45I GTSAC 1 cut(s) 83
TspDTI ATGAA 2 cut(s) 45, 212
TspRI CASTG 1 cut(s) 561
Vha464I CTTAAG 1 cut(s) 209
XapI RAATTY 4 cut(s) 72, 142, 220, 543
XbaI TCTAGA 1 cut(s) 16
XceI RCATGY 2 cut(s) 61, 91
XmiI GTMKAC 1 cut(s) 699
XspI CTAG 2 cut(s) 17, 333
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.