WRKY transcription factor
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
No orthologs found for this gene in the current database.
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccB1I | GGYRCC | 2 cut(s) | 955, 1288 |
| AccB7I | CCANNNNNTGG | 2 cut(s) | 682, 904 |
| AccBSI | CCGCTC | 2 cut(s) | 387, 520 |
| AccII | CGCG | 2 cut(s) | 773, 1524 |
| AclWI | GGATC | 5 cut(s) | 17, 215, 981, 1115, 1176 |
| AcoI | YGGCCR | 1 cut(s) | 189 |
| AcsI | RAATTY | 2 cut(s) | 623, 847 |
| AcuI | CTGAAG | 1 cut(s) | 815 |
| AcyI | GRCGYC | 1 cut(s) | 1289 |
| AdeI | CACNNNGTG | 1 cut(s) | 904 |
| AfaI | GTAC | 2 cut(s) | 462, 1412 |
| AfeI | AGCGCT | 1 cut(s) | 886 |
| AfiI | CCNNNNNNNGG | 3 cut(s) | 682, 904, 1240 |
| AflIII | ACRYGT | 1 cut(s) | 151 |
| AgsI | TTSAA | 4 cut(s) | 628, 646, 749, 790 |
| AhlI | ACTAGT | 2 cut(s) | 665, 949 |
| AjnI | CCWGG | 2 cut(s) | 267, 472 |
| AluBI | AGCT | 5 cut(s) | 20, 725, 736, 752, 1277 |
| AluI | AGCT | 5 cut(s) | 20, 725, 736, 752, 1277 |
| Alw21I | GWGCWC | 1 cut(s) | 1279 |
| Alw26I | GTCTC | 1 cut(s) | 577 |
| AlwI | GGATC | 5 cut(s) | 17, 215, 981, 1115, 1176 |
| Ama87I | CYCGRG | 2 cut(s) | 1260, 1536 |
| Aor51HI | AGCGCT | 1 cut(s) | 886 |
| AoxI | GGCC | 5 cut(s) | 189, 607, 895, 1190, 1560 |
| ApeKI | GCWGC | 7 cut(s) | 887, 986, 1082, 1384, 1486, 1519, 1530 |
| ApoI | RAATTY | 2 cut(s) | 623, 847 |
| ArsI | GACNNNNNNTTYG | 4 cut(s) | 312, 344, 552, 584 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 1133 |
| AspLEI | GCGC | 3 cut(s) | 887, 1291, 1524 |
| AspS9I | GGNCC | 2 cut(s) | 608, 1190 |
| AsuC2I | CCSGG | 1 cut(s) | 1166 |
| AsuHPI | GGTGA | 5 cut(s) | 371, 471, 820, 1010, 1058 |
| AsuII | TTCGAA | 1 cut(s) | 1401 |
| AvaI | CYCGRG | 2 cut(s) | 1260, 1536 |
| BaeGI | GKGCMC | 1 cut(s) | 1092 |
| BalI | TGGCCA | 1 cut(s) | 191 |
| BanI | GGYRCC | 2 cut(s) | 955, 1288 |
| BanII | GRGCYC | 2 cut(s) | 1166, 1279 |
| BauI | CACGAG | 1 cut(s) | 1358 |
| BbsI | GAAGAC | 2 cut(s) | 279, 1014 |
| Bbv12I | GWGCWC | 1 cut(s) | 1279 |
| BbvI | GCAGC | 7 cut(s) | 874, 973, 1069, 1371, 1498, 1517, 1531 |
| BccI | CCATC | 4 cut(s) | 1298, 1329, 1478, 1552 |
| BcgI | CGANNNNNNTGC | 6 cut(s) | 85, 119, 493, 527, 1484, 1518 |
| BciT130I | CCWGG | 2 cut(s) | 269, 474 |
| BclI | TGATCA | 5 cut(s) | 553, 871, 1099, 1117, 1296 |
| BcnI | CCSGG | 1 cut(s) | 1166 |
| BcoDI | GTCTC | 1 cut(s) | 577 |
| BcuI | ACTAGT | 2 cut(s) | 665, 949 |
| BfaI | CTAG | 2 cut(s) | 666, 950 |
| BfmI | CTRYAG | 3 cut(s) | 249, 1083, 1517 |
| BfoI | RGCGCY | 2 cut(s) | 888, 1292 |
| BisI | GCNGC | 9 cut(s) | 385, 888, 987, 1083, 1175, 1385, 1487, 1520, 1531 |
| BlsI | GCNGC | 9 cut(s) | 386, 889, 988, 1084, 1176, 1386, 1488, 1521, 1532 |
| Bme1390I | CCNGG | 3 cut(s) | 269, 474, 1166 |
| BmeT110I | CYCGRG | 2 cut(s) | 1260, 1536 |
| BmgT120I | GGNCC | 2 cut(s) | 608, 1190 |
| BmiI | GGNNCC | 4 cut(s) | 610, 957, 1191, 1290 |
| BmrFI | CCNGG | 3 cut(s) | 269, 474, 1166 |
| BmsI | GCATC | 5 cut(s) | 786, 843, 1363, 1510, 1517 |
| BpiI | GAAGAC | 2 cut(s) | 279, 1014 |
| BplI | GAGNNNNNCTC | 2 cut(s) | 1243, 1275 |
| Bpu14I | TTCGAA | 1 cut(s) | 1401 |
| BpuEI | CTTGAG | 1 cut(s) | 743 |
| BpuMI | CCSGG | 1 cut(s) | 1166 |
| Bsa29I | ATCGAT | 1 cut(s) | 1371 |
| BsaBI | GATNNNNATC | 1 cut(s) | 219 |
| BsaHI | GRCGYC | 1 cut(s) | 1289 |
| BsaJI | CCNNGG | 4 cut(s) | 898, 959, 1205, 1379 |
| BsaXI | ACNNNNNCTCC | 6 cut(s) | 98, 128, 894, 924, 1059, 1089 |
| Bsc4I | CCNNNNNNNGG | 3 cut(s) | 682, 904, 1240 |
| Bse1I | ACTGG | 1 cut(s) | 643 |
| Bse3DI | GCAATG | 4 cut(s) | 101, 1474, 1496, 1502 |
| Bse8I | GATNNNNATC | 1 cut(s) | 219 |
| BseBI | CCWGG | 2 cut(s) | 269, 474 |
| BseCI | ATCGAT | 1 cut(s) | 1371 |
| BseDI | CCNNGG | 4 cut(s) | 898, 959, 1205, 1379 |
| BseGI | GGATG | 6 cut(s) | 701, 771, 801, 1313, 1470, 1532 |
| BseJI | GATNNNNATC | 1 cut(s) | 219 |
| BseLI | CCNNNNNNNGG | 3 cut(s) | 682, 904, 1240 |
| BseMI | GCAATG | 4 cut(s) | 101, 1474, 1496, 1502 |
| BseMII | CTCAG | 2 cut(s) | 60, 1230 |
| BseNI | ACTGG | 1 cut(s) | 643 |
| BseRI | GAGGAG | 4 cut(s) | 381, 393, 396, 1172 |
| BseSI | GKGCMC | 1 cut(s) | 1092 |
| BseXI | GCAGC | 7 cut(s) | 874, 973, 1069, 1371, 1498, 1517, 1531 |
| BsgI | GTGCAG | 1 cut(s) | 1442 |
| Bsh1236I | CGCG | 2 cut(s) | 773, 1524 |
| Bsh1285I | CGRYCG | 1 cut(s) | 1283 |
| BshFI | GGCC | 5 cut(s) | 191, 609, 897, 1192, 1562 |
| BshNI | GGYRCC | 2 cut(s) | 955, 1288 |
| BshVI | ATCGAT | 1 cut(s) | 1371 |
| BsiEI | CGRYCG | 1 cut(s) | 1283 |
| BsiHKAI | GWGCWC | 1 cut(s) | 1279 |
| BsiHKCI | CYCGRG | 2 cut(s) | 1260, 1536 |
| BsiSI | CCGG | 2 cut(s) | 1166, 1483 |
| BslFI | GGGAC | 1 cut(s) | 536 |
| BslI | CCNNNNNNNGG | 3 cut(s) | 682, 904, 1240 |
| BsmAI | GTCTC | 1 cut(s) | 577 |
| BsmBI | CGTCTC | 1 cut(s) | 577 |
| BsmFI | GGGAC | 1 cut(s) | 536 |
| BsmI | GAATGC | 1 cut(s) | 1012 |
| BsnI | GGCC | 5 cut(s) | 191, 609, 897, 1192, 1562 |
| BsoBI | CYCGRG | 2 cut(s) | 1260, 1536 |
| Bsp119I | TTCGAA | 1 cut(s) | 1401 |
| Bsp1286I | GDGCHC | 3 cut(s) | 1092, 1166, 1279 |
| Bsp1407I | TGTACA | 1 cut(s) | 460 |
| Bsp19I | CCATGG | 1 cut(s) | 1379 |
| BspANI | GGCC | 5 cut(s) | 191, 609, 897, 1192, 1562 |
| BspCNI | CTCAG | 2 cut(s) | 59, 1231 |
| BspDI | ATCGAT | 1 cut(s) | 1371 |
| BspFNI | CGCG | 2 cut(s) | 773, 1524 |
| BspLI | GGNNCC | 4 cut(s) | 610, 957, 1191, 1290 |
| BspMAI | CTGCAG | 2 cut(s) | 1087, 1521 |
| BspPI | GGATC | 5 cut(s) | 17, 215, 981, 1115, 1176 |
| BspT104I | TTCGAA | 1 cut(s) | 1401 |
| BspT107I | GGYRCC | 2 cut(s) | 955, 1288 |
| BsrBI | CCGCTC | 2 cut(s) | 387, 520 |
| BsrDI | GCAATG | 4 cut(s) | 101, 1474, 1496, 1502 |
| BsrGI | TGTACA | 1 cut(s) | 460 |
| BsrI | ACTGG | 1 cut(s) | 643 |
| BssECI | CCNNGG | 4 cut(s) | 898, 959, 1205, 1379 |
| BssNI | GRCGYC | 1 cut(s) | 1289 |
| BssSI | CACGAG | 1 cut(s) | 1358 |
| BssT1I | CCWWGG | 1 cut(s) | 1379 |
| Bst2BI | CACGAG | 1 cut(s) | 1358 |
| Bst2UI | CCWGG | 2 cut(s) | 269, 474 |
| Bst4CI | ACNGT | 6 cut(s) | 423, 742, 786, 881, 1020, 1053 |
| BstACI | GRCGYC | 1 cut(s) | 1289 |
| BstAUI | TGTACA | 1 cut(s) | 460 |
| BstBI | TTCGAA | 1 cut(s) | 1401 |
| BstDEI | CTNAG | 2 cut(s) | 46, 1239 |
| BstDSI | CCRYGG | 2 cut(s) | 898, 1379 |
| BstEII | GGTNACC | 1 cut(s) | 808 |
| BstF5I | GGATG | 6 cut(s) | 701, 771, 801, 1313, 1470, 1532 |
| BstFNI | CGCG | 2 cut(s) | 773, 1524 |
| BstH2I | RGCGCY | 2 cut(s) | 888, 1292 |
| BstHHI | GCGC | 3 cut(s) | 887, 1291, 1524 |
| BstMAI | GTCTC | 1 cut(s) | 577 |
| BstMCI | CGRYCG | 1 cut(s) | 1283 |
| BstMWI | GCNNNNNNNGC | 3 cut(s) | 546, 1492, 1530 |
| BstNI | CCWGG | 2 cut(s) | 269, 474 |
| BstPI | GGTNACC | 1 cut(s) | 808 |
| BstSCI | CCNGG | 3 cut(s) | 267, 472, 1164 |
| BstSFI | CTRYAG | 3 cut(s) | 249, 1083, 1517 |
| BstSLI | GKGCMC | 1 cut(s) | 1092 |
| BstUI | CGCG | 2 cut(s) | 773, 1524 |
| BstV1I | GCAGC | 7 cut(s) | 874, 973, 1069, 1371, 1498, 1517, 1531 |
| BstV2I | GAAGAC | 2 cut(s) | 279, 1014 |
| BstX2I | RGATCY | 2 cut(s) | 220, 973 |
| BstXI | CCANNNNNNTGG | 2 cut(s) | 619, 1185 |
| BstYI | RGATCY | 2 cut(s) | 220, 973 |
| Bsu15I | ATCGAT | 1 cut(s) | 1371 |
| BsuRI | GGCC | 5 cut(s) | 191, 609, 897, 1192, 1562 |
| BsuTUI | ATCGAT | 1 cut(s) | 1371 |
| BtgI | CCRYGG | 2 cut(s) | 898, 1379 |
| BtgZI | GCGATG | 1 cut(s) | 1110 |
| BtsCI | GGATG | 6 cut(s) | 701, 771, 801, 1313, 1470, 1532 |
| BtsIMutI | CAGTG | 2 cut(s) | 687, 1299 |
| CfoI | GCGC | 3 cut(s) | 887, 1291, 1524 |
| Cfr13I | GGNCC | 2 cut(s) | 608, 1190 |
| ClaI | ATCGAT | 1 cut(s) | 1371 |
| CseI | GACGC | 1 cut(s) | 1010 |
| Csp6I | GTAC | 2 cut(s) | 461, 1411 |
| CspCI | CAANNNNNGTGG | 2 cut(s) | 181, 216 |
| CviAII | CATG | 7 cut(s) | 352, 358, 605, 619, 970, 1352, 1380 |
| CviQI | GTAC | 2 cut(s) | 461, 1411 |
| DdeI | CTNAG | 2 cut(s) | 46, 1239 |
| DinI | GGCGCC | 1 cut(s) | 1290 |
| DraI | TTTAAA | 1 cut(s) | 30 |
| DraIII | CACNNNGTG | 1 cut(s) | 904 |
| EaeI | YGGCCR | 1 cut(s) | 189 |
| EciI | GGCGGA | 1 cut(s) | 384 |
| Ecl136II | GAGCTC | 1 cut(s) | 1277 |
| Eco130I | CCWWGG | 1 cut(s) | 1379 |
| Eco24I | GRGCYC | 2 cut(s) | 1166, 1279 |
| Eco47III | AGCGCT | 1 cut(s) | 886 |
| Eco53kI | GAGCTC | 1 cut(s) | 1277 |
| Eco57I | CTGAAG | 1 cut(s) | 815 |
| Eco88I | CYCGRG | 2 cut(s) | 1260, 1536 |
| Eco91I | GGTNACC | 1 cut(s) | 808 |
| EcoICRI | GAGCTC | 1 cut(s) | 1277 |
| EcoO109I | RGGNCCY | 1 cut(s) | 1190 |
| EcoO65I | GGTNACC | 1 cut(s) | 808 |
| EcoRI | GAATTC | 1 cut(s) | 623 |
| EcoRII | CCWGG | 2 cut(s) | 267, 472 |
| EcoT14I | CCWWGG | 1 cut(s) | 1379 |
| EcoT38I | GRGCYC | 2 cut(s) | 1166, 1279 |
| EgeI | GGCGCC | 1 cut(s) | 1290 |
| EheI | GGCGCC | 1 cut(s) | 1290 |
| ErhI | CCWWGG | 1 cut(s) | 1379 |
| Esp3I | CGTCTC | 1 cut(s) | 577 |
| FaeI | CATG | 7 cut(s) | 355, 361, 608, 622, 973, 1355, 1383 |
| FaqI | GGGAC | 1 cut(s) | 536 |
| FatI | CATG | 7 cut(s) | 351, 357, 604, 618, 969, 1351, 1379 |
| FauI | CCCGC | 1 cut(s) | 513 |
| FauNDI | CATATG | 1 cut(s) | 1452 |
| FbaI | TGATCA | 5 cut(s) | 553, 871, 1099, 1117, 1296 |
| Fnu4HI | GCNGC | 9 cut(s) | 385, 888, 987, 1083, 1175, 1385, 1487, 1520, 1531 |
| FokI | GGATG | 6 cut(s) | 688, 778, 808, 1320, 1457, 1539 |
| FriOI | GRGCYC | 2 cut(s) | 1166, 1279 |
| Fsp4HI | GCNGC | 9 cut(s) | 385, 888, 987, 1083, 1175, 1385, 1487, 1520, 1531 |
| FspBI | CTAG | 2 cut(s) | 666, 950 |
| GlaI | GCGC | 3 cut(s) | 886, 1290, 1523 |
| GluI | GCNGC | 9 cut(s) | 385, 888, 987, 1083, 1175, 1385, 1487, 1520, 1531 |
| HaeII | RGCGCY | 2 cut(s) | 888, 1292 |
| HaeIII | GGCC | 5 cut(s) | 191, 609, 897, 1192, 1562 |
| HapII | CCGG | 2 cut(s) | 1166, 1483 |
| HgaI | GACGC | 1 cut(s) | 1010 |
| HhaI | GCGC | 3 cut(s) | 887, 1291, 1524 |
| Hin1I | GRCGYC | 1 cut(s) | 1289 |
| Hin1II | CATG | 7 cut(s) | 355, 361, 608, 622, 973, 1355, 1383 |
| Hin6I | GCGC | 3 cut(s) | 885, 1289, 1522 |
| HinP1I | GCGC | 3 cut(s) | 885, 1289, 1522 |
| HincII | GTYRAC | 1 cut(s) | 1231 |
| HindII | GTYRAC | 1 cut(s) | 1231 |
| HinfI | GANTC | 5 cut(s) | 97, 204, 215, 646, 1147 |
| HpaII | CCGG | 2 cut(s) | 1166, 1483 |
| HphI | GGTGA | 5 cut(s) | 371, 471, 820, 1010, 1058 |
| Hpy166II | GTNNAC | 4 cut(s) | 203, 688, 1049, 1231 |
| Hpy188I | TCNGA | 7 cut(s) | 220, 876, 1030, 1152, 1206, 1221, 1285 |
| Hpy188III | TCNNGA | 3 cut(s) | 557, 1121, 1138 |
| Hpy8I | GTNNAC | 4 cut(s) | 203, 688, 1049, 1231 |
| Hpy99I | CGWCG | 3 cut(s) | 455, 458, 518 |
| HpyCH4III | ACNGT | 6 cut(s) | 423, 742, 786, 881, 1020, 1053 |
| HpyCH4IV | ACGT | 3 cut(s) | 153, 630, 1036 |
| HpyCH4V | TGCA | 9 cut(s) | 106, 827, 838, 856, 1085, 1376, 1423, 1519, 1555 |
| HpyF10VI | GCNNNNNNNGC | 3 cut(s) | 546, 1492, 1530 |
| HpyF3I | CTNAG | 2 cut(s) | 46, 1239 |
| HpySE526I | ACGT | 3 cut(s) | 153, 630, 1036 |
| Hsp92I | GRCGYC | 1 cut(s) | 1289 |
| Hsp92II | CATG | 7 cut(s) | 355, 361, 608, 622, 973, 1355, 1383 |
| HspAI | GCGC | 3 cut(s) | 885, 1289, 1522 |
| KasI | GGCGCC | 1 cut(s) | 1288 |
| Ksp22I | TGATCA | 5 cut(s) | 553, 871, 1099, 1117, 1296 |
| LmnI | GCTCC | 1 cut(s) | 449 |
| Lsp1109I | GCAGC | 7 cut(s) | 874, 973, 1069, 1371, 1498, 1517, 1531 |
| LweI | GCATC | 5 cut(s) | 786, 843, 1363, 1510, 1517 |
| MaeI | CTAG | 2 cut(s) | 666, 950 |
| MaeII | ACGT | 3 cut(s) | 153, 630, 1036 |
| MaeIII | GTNAC | 4 cut(s) | 4, 671, 808, 998 |
| MbiI | CCGCTC | 2 cut(s) | 387, 520 |
| MboII | GAAGA | 7 cut(s) | 284, 520, 641, 737, 926, 934, 1014 |
| MflI | RGATCY | 2 cut(s) | 220, 973 |
| MhlI | GDGCHC | 3 cut(s) | 1092, 1166, 1279 |
| MlsI | TGGCCA | 1 cut(s) | 191 |
| MluCI | AATT | 5 cut(s) | 171, 623, 817, 847, 1213 |
| MluNI | TGGCCA | 1 cut(s) | 191 |
| Mly113I | GGCGCC | 1 cut(s) | 1289 |
| MlyI | GAGTC | 2 cut(s) | 106, 198 |
| MmeI | TCCRAC | 3 cut(s) | 100, 516, 729 |
| Mox20I | TGGCCA | 1 cut(s) | 191 |
| MroXI | GAANNNNTTC | 1 cut(s) | 1133 |
| MscI | TGGCCA | 1 cut(s) | 191 |
| MseI | TTAA | 2 cut(s) | 29, 801 |
| MslI | CAYNNNNRTG | 3 cut(s) | 356, 617, 1095 |
| Msp20I | TGGCCA | 1 cut(s) | 191 |
| MspA1I | CMGCKG | 1 cut(s) | 20 |
| MspI | CCGG | 2 cut(s) | 1166, 1483 |
| MspR9I | CCNGG | 3 cut(s) | 269, 474, 1166 |
| Mva1269I | GAATGC | 1 cut(s) | 1012 |
| MvaI | CCWGG | 2 cut(s) | 269, 474 |
| MvnI | CGCG | 2 cut(s) | 773, 1524 |
| MwoI | GCNNNNNNNGC | 3 cut(s) | 546, 1492, 1530 |
| NarI | GGCGCC | 1 cut(s) | 1289 |
| NciI | CCSGG | 1 cut(s) | 1166 |
| NcoI | CCATGG | 1 cut(s) | 1379 |
| NdeI | CATATG | 1 cut(s) | 1452 |
| NlaIII | CATG | 7 cut(s) | 355, 361, 608, 622, 973, 1355, 1383 |
| NlaIV | GGNNCC | 4 cut(s) | 610, 957, 1191, 1290 |
| NmeAIII | GCCGAG | 2 cut(s) | 120, 984 |
| NmuCI | GTSAC | 3 cut(s) | 671, 808, 998 |
| NspV | TTCGAA | 1 cut(s) | 1401 |
| PcsI | WCGNNNNNNNCGW | 1 cut(s) | 576 |
| PctI | GAATGC | 1 cut(s) | 1012 |
| PdmI | GAANNNNTTC | 1 cut(s) | 1133 |
| PfeI | GAWTC | 3 cut(s) | 215, 646, 1147 |
| PflMI | CCANNNNNTGG | 2 cut(s) | 682, 904 |
| PfoI | TCCNGGA | 1 cut(s) | 267 |
| PkrI | GCNGC | 9 cut(s) | 386, 889, 988, 1084, 1176, 1386, 1488, 1521, 1532 |
| Ple19I | CGATCG | 1 cut(s) | 1283 |
| PleI | GAGTC | 2 cut(s) | 105, 198 |
| PluTI | GGCGCC | 1 cut(s) | 1292 |
| PpsI | GAGTC | 2 cut(s) | 105, 198 |
| Psp124BI | GAGCTC | 1 cut(s) | 1279 |
| Psp6I | CCWGG | 2 cut(s) | 267, 472 |
| PspEI | GGTNACC | 1 cut(s) | 808 |
| PspGI | CCWGG | 2 cut(s) | 267, 472 |
| PspN4I | GGNNCC | 4 cut(s) | 610, 957, 1191, 1290 |
| PspPI | GGNCC | 2 cut(s) | 608, 1190 |
| PstI | CTGCAG | 2 cut(s) | 1087, 1521 |
| PsuI | RGATCY | 2 cut(s) | 220, 973 |
| PvuI | CGATCG | 1 cut(s) | 1283 |
| PvuII | CAGCTG | 1 cut(s) | 20 |
| RsaI | GTAC | 2 cut(s) | 462, 1412 |
| RsaNI | GTAC | 2 cut(s) | 461, 1411 |
| RseI | CAYNNNNRTG | 3 cut(s) | 356, 617, 1095 |
| SacI | GAGCTC | 1 cut(s) | 1279 |
| SaqAI | TTAA | 2 cut(s) | 29, 801 |
| SatI | GCNGC | 9 cut(s) | 385, 888, 987, 1083, 1175, 1385, 1487, 1520, 1531 |
| Sau96I | GGNCC | 2 cut(s) | 608, 1190 |
| SchI | GAGTC | 2 cut(s) | 106, 198 |
| ScrFI | CCNGG | 3 cut(s) | 269, 474, 1166 |
| SduI | GDGCHC | 3 cut(s) | 1092, 1166, 1279 |
| SfaNI | GCATC | 5 cut(s) | 786, 843, 1363, 1510, 1517 |
| SfcI | CTRYAG | 3 cut(s) | 249, 1083, 1517 |
| SfoI | GGCGCC | 1 cut(s) | 1290 |
| SfuI | TTCGAA | 1 cut(s) | 1401 |
| SmiMI | CAYNNNNRTG | 3 cut(s) | 356, 617, 1095 |
| SmlI | CTYRAG | 1 cut(s) | 758 |
| SmoI | CTYRAG | 1 cut(s) | 758 |
| SpeI | ACTAGT | 2 cut(s) | 665, 949 |
| Sse9I | AATT | 5 cut(s) | 171, 623, 817, 847, 1213 |
| SspDI | GGCGCC | 1 cut(s) | 1288 |
| SspMI | CTAG | 2 cut(s) | 666, 950 |
| SstI | GAGCTC | 1 cut(s) | 1279 |
| StyD4I | CCNGG | 3 cut(s) | 267, 472, 1164 |
| StyI | CCWWGG | 1 cut(s) | 1379 |
| TaaI | ACNGT | 6 cut(s) | 423, 742, 786, 881, 1020, 1053 |
| TaiI | ACGT | 3 cut(s) | 156, 633, 1039 |
| TaqI | TCGA | 6 cut(s) | 513, 1137, 1279, 1371, 1401, 1504 |
| TaqII | GACCGA | 1 cut(s) | 291 |
| TasI | AATT | 5 cut(s) | 171, 623, 817, 847, 1213 |
| TatI | WGTACW | 2 cut(s) | 460, 1410 |
| TauI | GCSGC | 2 cut(s) | 387, 1177 |
| TfiI | GAWTC | 3 cut(s) | 215, 646, 1147 |
| Tru1I | TTAA | 2 cut(s) | 29, 801 |
| Tru9I | TTAA | 2 cut(s) | 29, 801 |
| TscAI | CASTG | 2 cut(s) | 687, 1306 |
| TseFI | GTSAC | 3 cut(s) | 671, 808, 998 |
| TseI | GCWGC | 7 cut(s) | 887, 986, 1082, 1384, 1486, 1519, 1530 |
| Tsp45I | GTSAC | 3 cut(s) | 671, 808, 998 |
| TspDTI | ATGAA | 6 cut(s) | 690, 782, 944, 958, 1047, 1469 |
| TspGWI | ACGGA | 1 cut(s) | 915 |
| TspRI | CASTG | 2 cut(s) | 687, 1306 |
| Van91I | CCANNNNNTGG | 2 cut(s) | 682, 904 |
| XapI | RAATTY | 2 cut(s) | 623, 847 |
| XcmI | CCANNNNNNNNNTGG | 1 cut(s) | 175 |
| XmnI | GAANNNNTTC | 1 cut(s) | 1133 |
| XspI | CTAG | 2 cut(s) | 666, 950 |