pycom17g14950
ERF Family

Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr17
N/A
Physical Location & Seq
Reverse (-)
12709152 .. 12709573
422 bp
Loading structure...
UTR
Exon/CDS
Intron
N/A

Sequence Viewer

Length: 381 bp
ATGCATTCAATGAAGTCTACCACTGATGCCTTCAAGCTTATGAAATTTGGTGAGAGGAATCGTATGGCCAGTTCATCCATATTCAGTAACTACAGCAGTCGTTCCTATAATGTCCTAATAGTCAATGTGAAGGGGAAAGATACTTTTGGAGGCACTCTACGCAATTACCTTCATTTAGTAGACCTTACGGGATGTTTAAAATATATCAACAAGTTTCTCCCTTGTTTTGGAGATGTTAACACAGCTTTGGCTCAAAAGAATTCTCACACCCCTCACGAAAACAGGAAATTCACACTTATGTTGGAATACCCAGTTGCTACTCATTTCAAACAAGTTTTTCAATCCTTCAACCTTGAGGACAAGGTTTTTCTTAAGAGGTAG

Protein Analysis

127

Amino Acids

14.55

Weight (kDa)

9.77

Isoelectric Point (pI)

31.79

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Kinesin PF00225 2 - 102 6.8e-08 Kinesin motor domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

Orthologous Genes

No orthologs found for this gene in the current database.

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccI GTMKAC 2 cut(s) 17, 180
AcoI YGGCCR 1 cut(s) 66
AcsI RAATTY 3 cut(s) 44, 259, 287
AfiI CCNNNNNNNGG 1 cut(s) 227
AflII CTTAAG 1 cut(s) 371
AgsI TTSAA 5 cut(s) 9, 34, 328, 341, 349
AluBI AGCT 2 cut(s) 37, 245
AluI AGCT 2 cut(s) 37, 245
AoxI GGCC 1 cut(s) 66
ApoI RAATTY 3 cut(s) 44, 259, 287
AsuHPI GGTGA 1 cut(s) 62
BalI TGGCCA 1 cut(s) 68
BfmI CTRYAG 1 cut(s) 91
BfrI CTTAAG 1 cut(s) 371
BmrI ACTGGG 1 cut(s) 305
BmsI GCATC 1 cut(s) 16
BmuI ACTGGG 1 cut(s) 305
BpuEI CTTGAG 1 cut(s) 374
Bsc4I CCNNNNNNNGG 1 cut(s) 227
Bse1I ACTGG 2 cut(s) 69, 311
BseGI GGATG 2 cut(s) 74, 197
BseLI CCNNNNNNNGG 1 cut(s) 227
BseNI ACTGG 2 cut(s) 69, 311
BshFI GGCC 1 cut(s) 68
BslI CCNNNNNNNGG 1 cut(s) 227
BsmI GAATGC 1 cut(s) 4
BsnI GGCC 1 cut(s) 68
BspANI GGCC 1 cut(s) 68
BspTI CTTAAG 1 cut(s) 371
BsrI ACTGG 2 cut(s) 69, 311
BstAFI CTTAAG 1 cut(s) 371
BstF5I GGATG 2 cut(s) 74, 197
BstMWI GCNNNNNNNGC 1 cut(s) 159
BstSFI CTRYAG 1 cut(s) 91
BsuRI GGCC 1 cut(s) 68
BtsCI GGATG 2 cut(s) 74, 197
BtsIMutI CAGTG 1 cut(s) 21
CviJI RGCY 4 cut(s) 37, 68, 245, 251
CviKI_1 RGCY 4 cut(s) 37, 68, 245, 251
DraI TTTAAA 1 cut(s) 198
EaeI YGGCCR 1 cut(s) 66
EcoRI GAATTC 1 cut(s) 259
EcoT22I ATGCAT 1 cut(s) 6
FaiI YATR 6 cut(s) 41, 65, 80, 108, 204, 299
FblI GTMKAC 2 cut(s) 17, 180
FokI GGATG 2 cut(s) 61, 204
HaeIII GGCC 1 cut(s) 68
HincII GTYRAC 1 cut(s) 238
HindII GTYRAC 1 cut(s) 238
HindIII AAGCTT 1 cut(s) 35
HinfI GANTC 1 cut(s) 58
HpaI GTTAAC 1 cut(s) 238
HphI GGTGA 1 cut(s) 62
Hpy166II GTNNAC 3 cut(s) 18, 181, 238
Hpy188III TCNNGA 1 cut(s) 275
Hpy8I GTNNAC 3 cut(s) 18, 181, 238
HpyAV CCTTC 4 cut(s) 40, 124, 179, 355
HpyCH4V TGCA 1 cut(s) 4
HpyF10VI GCNNNNNNNGC 1 cut(s) 159
KspAI GTTAAC 1 cut(s) 238
LpnPI CCDG 3 cut(s) 82, 268, 324
LweI GCATC 1 cut(s) 16
MaeIII GTNAC 1 cut(s) 86
MlsI TGGCCA 1 cut(s) 68
MluCI AATT 4 cut(s) 44, 163, 259, 287
MluNI TGGCCA 1 cut(s) 68
MmeI TCCRAC 1 cut(s) 282
MnlI CCTC 5 cut(s) 48, 143, 282, 349, 369
Mox20I TGGCCA 1 cut(s) 68
Mph1103I ATGCAT 1 cut(s) 6
MscI TGGCCA 1 cut(s) 68
MseI TTAA 3 cut(s) 197, 237, 372
MslI CAYNNNNRTG 1 cut(s) 296
Msp20I TGGCCA 1 cut(s) 68
MspCI CTTAAG 1 cut(s) 371
Mva1269I GAATGC 1 cut(s) 4
MwoI GCNNNNNNNGC 1 cut(s) 159
NsiI ATGCAT 1 cut(s) 6
PctI GAATGC 1 cut(s) 4
PfeI GAWTC 1 cut(s) 58
PsrI GAACNNNNNNTAC 2 cut(s) 55, 87
RseI CAYNNNNRTG 1 cut(s) 296
SaqAI TTAA 3 cut(s) 197, 237, 372
SetI ASST 7 cut(s) 39, 171, 186, 247, 354, 366, 380
SfaNI GCATC 1 cut(s) 16
SfcI CTRYAG 1 cut(s) 91
SmiMI CAYNNNNRTG 1 cut(s) 296
SmlI CTYRAG 2 cut(s) 353, 371
SmoI CTYRAG 2 cut(s) 353, 371
Sse9I AATT 4 cut(s) 44, 163, 259, 287
TasI AATT 4 cut(s) 44, 163, 259, 287
TfiI GAWTC 1 cut(s) 58
Tru1I TTAA 3 cut(s) 197, 237, 372
Tru9I TTAA 3 cut(s) 197, 237, 372
TscAI CASTG 1 cut(s) 28
TspDTI ATGAA 4 cut(s) 26, 56, 63, 161
TspRI CASTG 1 cut(s) 28
Vha464I CTTAAG 1 cut(s) 371
XapI RAATTY 3 cut(s) 44, 259, 287
XmiI GTMKAC 2 cut(s) 17, 180
Zsp2I ATGCAT 1 cut(s) 6
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.