40S ribosomal protein
| Domain Name | Pfam ID | Position | E-value | Description |
|---|---|---|---|---|
| Ribosomal_S28e | PF01200 | 79 - 118 | 3.4e-19 | Ribosomal protein S28e |
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No orthologs found for this gene in the current database.
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AciI | CCGC | 1 cut(s) | 355 |
| AcsI | RAATTY | 2 cut(s) | 179, 248 |
| AfaI | GTAC | 1 cut(s) | 29 |
| AfiI | CCNNNNNNNGG | 1 cut(s) | 43 |
| AgsI | TTSAA | 1 cut(s) | 162 |
| Ama87I | CYCGRG | 1 cut(s) | 326 |
| ApoI | RAATTY | 2 cut(s) | 179, 248 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 269 |
| AspS9I | GGNCC | 1 cut(s) | 293 |
| AsuHPI | GGTGA | 1 cut(s) | 58 |
| AvaI | CYCGRG | 1 cut(s) | 326 |
| AvaII | GGWCC | 1 cut(s) | 293 |
| BfaI | CTAG | 2 cut(s) | 95, 150 |
| Bme18I | GGWCC | 1 cut(s) | 293 |
| BmeT110I | CYCGRG | 1 cut(s) | 326 |
| BmgT120I | GGNCC | 1 cut(s) | 293 |
| BmiI | GGNNCC | 1 cut(s) | 294 |
| BsaWI | WCCGGW | 1 cut(s) | 43 |
| Bsc4I | CCNNNNNNNGG | 1 cut(s) | 43 |
| Bse1I | ACTGG | 1 cut(s) | 296 |
| BseGI | GGATG | 1 cut(s) | 262 |
| BseLI | CCNNNNNNNGG | 1 cut(s) | 43 |
| BseNI | ACTGG | 1 cut(s) | 296 |
| BsiHKCI | CYCGRG | 1 cut(s) | 326 |
| BsiSI | CCGG | 1 cut(s) | 44 |
| BslFI | GGGAC | 1 cut(s) | 306 |
| BslI | CCNNNNNNNGG | 1 cut(s) | 43 |
| BsmFI | GGGAC | 1 cut(s) | 306 |
| BsoBI | CYCGRG | 1 cut(s) | 326 |
| BspACI | CCGC | 1 cut(s) | 355 |
| BspHI | TCATGA | 1 cut(s) | 276 |
| BspLI | GGNNCC | 1 cut(s) | 294 |
| BsrI | ACTGG | 1 cut(s) | 296 |
| Bst4CI | ACNGT | 2 cut(s) | 25, 269 |
| BstC8I | GCNNGC | 1 cut(s) | 231 |
| BstDEI | CTNAG | 1 cut(s) | 38 |
| BstF5I | GGATG | 1 cut(s) | 262 |
| BstNSI | RCATGY | 1 cut(s) | 233 |
| BtsCI | GGATG | 1 cut(s) | 262 |
| BtsIMutI | CAGTG | 1 cut(s) | 303 |
| Cac8I | GCNNGC | 1 cut(s) | 231 |
| CciI | TCATGA | 1 cut(s) | 276 |
| Cfr13I | GGNCC | 1 cut(s) | 293 |
| Csp6I | GTAC | 1 cut(s) | 28 |
| CviAII | CATG | 3 cut(s) | 86, 230, 277 |
| CviQI | GTAC | 1 cut(s) | 28 |
| DdeI | CTNAG | 1 cut(s) | 38 |
| Eco32I | GATATC | 1 cut(s) | 313 |
| Eco47I | GGWCC | 1 cut(s) | 293 |
| Eco88I | CYCGRG | 1 cut(s) | 326 |
| EcoRV | GATATC | 1 cut(s) | 313 |
| FaeI | CATG | 3 cut(s) | 89, 233, 280 |
| FaiI | YATR | 8 cut(s) | 12, 20, 87, 109, 128, 167, 231, 278 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 121, 153 |
| FaqI | GGGAC | 1 cut(s) | 306 |
| FatI | CATG | 3 cut(s) | 85, 229, 276 |
| FokI | GGATG | 1 cut(s) | 269 |
| FspBI | CTAG | 2 cut(s) | 95, 150 |
| HapII | CCGG | 1 cut(s) | 44 |
| Hin1II | CATG | 3 cut(s) | 89, 233, 280 |
| HinfI | GANTC | 3 cut(s) | 215, 243, 329 |
| HpaII | CCGG | 1 cut(s) | 44 |
| HphI | GGTGA | 1 cut(s) | 58 |
| Hpy166II | GTNNAC | 1 cut(s) | 28 |
| Hpy188I | TCNGA | 1 cut(s) | 334 |
| Hpy188III | TCNNGA | 2 cut(s) | 254, 277 |
| Hpy8I | GTNNAC | 1 cut(s) | 28 |
| HpyAV | CCTTC | 2 cut(s) | 156, 342 |
| HpyCH4III | ACNGT | 2 cut(s) | 25, 269 |
| HpyCH4IV | ACGT | 1 cut(s) | 169 |
| HpyF3I | CTNAG | 1 cut(s) | 38 |
| HpySE526I | ACGT | 1 cut(s) | 169 |
| Hsp92II | CATG | 3 cut(s) | 89, 233, 280 |
| LpnPI | CCDG | 4 cut(s) | 57, 239, 275, 309 |
| MaeI | CTAG | 2 cut(s) | 95, 150 |
| MaeII | ACGT | 1 cut(s) | 169 |
| MaeIII | GTNAC | 1 cut(s) | 64 |
| MluCI | AATT | 3 cut(s) | 179, 222, 248 |
| MlyI | GAGTC | 2 cut(s) | 252, 338 |
| MnlI | CCTC | 7 cut(s) | 42, 79, 273, 294, 298, 330, 334 |
| MroXI | GAANNNNTTC | 1 cut(s) | 269 |
| MseI | TTAA | 1 cut(s) | 225 |
| MspI | CCGG | 1 cut(s) | 44 |
| NlaIII | CATG | 3 cut(s) | 89, 233, 280 |
| NlaIV | GGNNCC | 1 cut(s) | 294 |
| NmuCI | GTSAC | 1 cut(s) | 64 |
| NspI | RCATGY | 1 cut(s) | 233 |
| PaeI | GCATGC | 1 cut(s) | 233 |
| PaeR7I | CTCGAG | 1 cut(s) | 326 |
| PagI | TCATGA | 1 cut(s) | 276 |
| PdmI | GAANNNNTTC | 1 cut(s) | 269 |
| PfeI | GAWTC | 1 cut(s) | 215 |
| PleI | GAGTC | 2 cut(s) | 251, 337 |
| PpsI | GAGTC | 2 cut(s) | 251, 337 |
| PspN4I | GGNNCC | 1 cut(s) | 294 |
| PspPI | GGNCC | 1 cut(s) | 293 |
| PspXI | VCTCGAGB | 1 cut(s) | 326 |
| RsaI | GTAC | 1 cut(s) | 29 |
| RsaNI | GTAC | 1 cut(s) | 28 |
| SaqAI | TTAA | 1 cut(s) | 225 |
| Sau96I | GGNCC | 1 cut(s) | 293 |
| SchI | GAGTC | 2 cut(s) | 252, 338 |
| SetI | ASST | 4 cut(s) | 71, 172, 323, 353 |
| Sfr274I | CTCGAG | 1 cut(s) | 326 |
| SinI | GGWCC | 1 cut(s) | 293 |
| SlaI | CTCGAG | 1 cut(s) | 326 |
| SmlI | CTYRAG | 1 cut(s) | 326 |
| SmoI | CTYRAG | 1 cut(s) | 326 |
| SphI | GCATGC | 1 cut(s) | 233 |
| Sse9I | AATT | 3 cut(s) | 179, 222, 248 |
| SsiI | CCGC | 1 cut(s) | 355 |
| SspMI | CTAG | 2 cut(s) | 95, 150 |
| TaaI | ACNGT | 2 cut(s) | 25, 269 |
| TaiI | ACGT | 1 cut(s) | 172 |
| TaqI | TCGA | 1 cut(s) | 327 |
| TasI | AATT | 3 cut(s) | 179, 222, 248 |
| TfiI | GAWTC | 1 cut(s) | 215 |
| Tru1I | TTAA | 1 cut(s) | 225 |
| Tru9I | TTAA | 1 cut(s) | 225 |
| TscAI | CASTG | 1 cut(s) | 303 |
| TseFI | GTSAC | 1 cut(s) | 64 |
| Tsp45I | GTSAC | 1 cut(s) | 64 |
| TspDTI | ATGAA | 1 cut(s) | 262 |
| TspRI | CASTG | 1 cut(s) | 303 |
| VpaK11BI | GGWCC | 1 cut(s) | 293 |
| XapI | RAATTY | 2 cut(s) | 179, 248 |
| XceI | RCATGY | 1 cut(s) | 233 |
| XhoI | CTCGAG | 1 cut(s) | 326 |
| XmnI | GAANNNNTTC | 1 cut(s) | 269 |
| XspI | CTAG | 2 cut(s) | 95, 150 |