pycom17g19040

Catalyzes the phosphorylation of D-fructose 6-phosphate to fructose 1,6-bisphosphate by ATP, the first committing step of glycolysis

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr17
OG0029491
Physical Location & Seq
Reverse (-)
16582079 .. 16583266
1188 bp
Loading structure...
UTR
Exon/CDS
Intron
N/A

Sequence Viewer

Length: 342 bp
ATGGCAATTTCCGACAACTGCGAGCCCAAAATGGCCCCCGGCCCCTGCGGCTACGTCCTCGAAGATGTTCGTCGCTTAGTTGATTACATCCCCGATCTCCCAGAAACTCTCCCTCTCTCCTACTATTCTACTTCTCTCTTTCTTAAGGTTCTGTTTGGATTCAAATTATGGGGATCAGAAAAAAACTACTCAGTATATCAGTATCTTCCTAAATCTTTACAGAGACTAACACCAAGATTAACCAAGGAGAATGACACTCCAAGAGTCACAGAAAGAATGACACTTTCTTCTTTAAACCCACAAACTTTAACTCCCAACATATTCTCAAATCCCAGAGAATGA

Protein Analysis

114

Amino Acids

13.01

Weight (kDa)

7.72

Isoelectric Point (pI)

33.98

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0029491)

Species Orthologous Gene IDs
pyrus_communis pycom17g19040
rosa_samantha Rh6BG032100

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AciI CCGC 1 cut(s) 48
AclWI GGATC 1 cut(s) 181
AflII CTTAAG 1 cut(s) 143
AgsI TTSAA 1 cut(s) 163
Alw26I GTCTC 1 cut(s) 217
AlwI GGATC 1 cut(s) 181
AoxI GGCC 2 cut(s) 33, 40
Asp700I GAANNNNTTC 1 cut(s) 66
AspS9I GGNCC 2 cut(s) 34, 41
AsuC2I CCSGG 1 cut(s) 39
BanII GRGCYC 1 cut(s) 27
BcnI CCSGG 1 cut(s) 39
BcoDI GTCTC 1 cut(s) 217
BfrI CTTAAG 1 cut(s) 143
BglI GCCNNNNNGGC 1 cut(s) 48
BisI GCNGC 1 cut(s) 49
BlsI GCNGC 1 cut(s) 50
Bme1390I CCNGG 1 cut(s) 39
BmgT120I GGNCC 2 cut(s) 34, 41
BmiI GGNNCC 2 cut(s) 36, 43
BmrFI CCNGG 1 cut(s) 39
BpuMI CCSGG 1 cut(s) 39
BsaJI CCNNGG 2 cut(s) 37, 243
BsaXI ACNNNNNCTCC 2 cut(s) 295, 325
BseDI CCNNGG 2 cut(s) 37, 243
BseGI GGATG 1 cut(s) 87
BseMII CTCAG 1 cut(s) 204
BshFI GGCC 2 cut(s) 35, 42
BsiSI CCGG 1 cut(s) 39
BsmAI GTCTC 1 cut(s) 217
BsnI GGCC 2 cut(s) 35, 42
Bsp1286I GDGCHC 1 cut(s) 27
Bsp143I GATC 2 cut(s) 94, 173
BspACI CCGC 1 cut(s) 48
BspANI GGCC 2 cut(s) 35, 42
BspCNI CTCAG 1 cut(s) 203
BspLI GGNNCC 2 cut(s) 36, 43
BspPI GGATC 1 cut(s) 181
BspTI CTTAAG 1 cut(s) 143
BssECI CCNNGG 2 cut(s) 37, 243
BssMI GATC 2 cut(s) 94, 173
BssT1I CCWWGG 1 cut(s) 243
BstAFI CTTAAG 1 cut(s) 143
BstC8I GCNNGC 1 cut(s) 23
BstDEI CTNAG 2 cut(s) 76, 190
BstF5I GGATG 1 cut(s) 87
BstKTI GATC 2 cut(s) 97, 176
BstMAI GTCTC 1 cut(s) 217
BstMBI GATC 2 cut(s) 94, 173
BstMWI GCNNNNNNNGC 1 cut(s) 48
BstSCI CCNGG 1 cut(s) 37
BsuRI GGCC 2 cut(s) 35, 42
BtsCI GGATG 1 cut(s) 87
Cac8I GCNNGC 1 cut(s) 23
Cfr13I GGNCC 2 cut(s) 34, 41
CviJI RGCY 4 cut(s) 25, 35, 42, 51
CviKI_1 RGCY 4 cut(s) 25, 35, 42, 51
DdeI CTNAG 2 cut(s) 76, 190
DpnI GATC 2 cut(s) 96, 175
DpnII GATC 2 cut(s) 94, 173
DraI TTTAAA 1 cut(s) 294
Eco130I CCWWGG 1 cut(s) 243
Eco24I GRGCYC 1 cut(s) 27
EcoT14I CCWWGG 1 cut(s) 243
EcoT38I GRGCYC 1 cut(s) 27
ErhI CCWWGG 1 cut(s) 243
FaiI YATR 3 cut(s) 169, 196, 320
Fnu4HI GCNGC 1 cut(s) 49
FokI GGATG 1 cut(s) 74
FriOI GRGCYC 1 cut(s) 27
Fsp4HI GCNGC 1 cut(s) 49
GluI GCNGC 1 cut(s) 49
HaeIII GGCC 2 cut(s) 35, 42
HapII CCGG 1 cut(s) 39
HinfI GANTC 2 cut(s) 159, 264
HpaII CCGG 1 cut(s) 39
Hpy188I TCNGA 2 cut(s) 13, 178
Hpy99I CGWCG 1 cut(s) 75
HpyCH4IV ACGT 1 cut(s) 54
HpyF10VI GCNNNNNNNGC 1 cut(s) 48
HpyF3I CTNAG 2 cut(s) 76, 190
HpySE526I ACGT 1 cut(s) 54
Kzo9I GATC 2 cut(s) 94, 173
LpnPI CCDG 3 cut(s) 52, 58, 114
MaeII ACGT 1 cut(s) 54
MaeIII GTNAC 1 cut(s) 265
MalI GATC 2 cut(s) 96, 175
MboI GATC 2 cut(s) 94, 173
MboII GAAGA 3 cut(s) 74, 197, 279
MhlI GDGCHC 1 cut(s) 27
MluCI AATT 2 cut(s) 6, 164
MlyI GAGTC 1 cut(s) 273
MmeI TCCRAC 1 cut(s) 36
MnlI CCTC 2 cut(s) 68, 123
MroXI GAANNNNTTC 1 cut(s) 66
MseI TTAA 4 cut(s) 144, 239, 293, 308
MspCI CTTAAG 1 cut(s) 143
MspI CCGG 1 cut(s) 39
MspR9I CCNGG 1 cut(s) 39
MwoI GCNNNNNNNGC 1 cut(s) 48
NciI CCSGG 1 cut(s) 39
NdeII GATC 2 cut(s) 94, 173
NlaIV GGNNCC 2 cut(s) 36, 43
NmuCI GTSAC 1 cut(s) 265
PdmI GAANNNNTTC 1 cut(s) 66
PfeI GAWTC 1 cut(s) 159
PkrI GCNGC 1 cut(s) 50
PleI GAGTC 1 cut(s) 272
PpsI GAGTC 1 cut(s) 272
PspN4I GGNNCC 2 cut(s) 36, 43
PspPI GGNCC 2 cut(s) 34, 41
SaqAI TTAA 4 cut(s) 144, 239, 293, 308
SatI GCNGC 1 cut(s) 49
Sau3AI GATC 2 cut(s) 94, 173
Sau96I GGNCC 2 cut(s) 34, 41
SchI GAGTC 1 cut(s) 273
ScrFI CCNGG 1 cut(s) 39
SduI GDGCHC 1 cut(s) 27
SetI ASST 2 cut(s) 57, 150
SmlI CTYRAG 1 cut(s) 143
SmoI CTYRAG 1 cut(s) 143
Sse9I AATT 2 cut(s) 6, 164
SsiI CCGC 1 cut(s) 48
StyD4I CCNGG 1 cut(s) 37
StyI CCWWGG 1 cut(s) 243
TaiI ACGT 1 cut(s) 57
TaqI TCGA 1 cut(s) 60
TasI AATT 2 cut(s) 6, 164
TauI GCSGC 1 cut(s) 51
TfiI GAWTC 1 cut(s) 159
Tru1I TTAA 4 cut(s) 144, 239, 293, 308
Tru9I TTAA 4 cut(s) 144, 239, 293, 308
TseFI GTSAC 1 cut(s) 265
Tsp45I GTSAC 1 cut(s) 265
Vha464I CTTAAG 1 cut(s) 143
XmnI GAANNNNTTC 1 cut(s) 66
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.