pycom17g23930

checkpoint serine threonine-protein kinase

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr17
N/A
Physical Location & Seq
Forward (+)
22190539 .. 22191946
1408 bp
Loading structure...
UTR
Exon/CDS
Intron
N/A

Sequence Viewer

Length: 555 bp
ATGGAAGAAGTGTTATGCATTTATTACACCATAGAAATGCTCTACATGCTAGAAACTCTGCATGGTGTTGGCATCATTCATGGAGATTTCAAGCCTGATAATTTGCTTATTCGTTATGCTAGGAATGGCCTTACAAAAGCCGGATCTCGTGACAGAACTGACTTTACAGAAGAAGAATTTCGTGAGAGAAGTGGTCCGTGGCTTGATCAGGGTCTATGCCTTGTCGACTGGGGAAGAGGGATAGACCTGCATCTCTTTCCTGACAATGTGGAGTTTACGGGAGATTGCCGGACTTCTGGATTTCGTTGTGTGGAAATGCAAGAGAATAGGCCATGGACATATCAAACACGTACGGACTCTGTGTTGTTGTCCATACGATGCTGCATAATTCTTACATGGAAATTGACAAGAAACCATCACCCGAAGGTGGTCACTTCTATCTGCCCAAGTCATCTTTTAAAAGATACTGGAATGTTGAACTCTGGAGGAACTTCTTTAAGAAACTGCTTAATAGTAGCCCCGGCTGTAACCACAAGAAGCTGTTGCAGGATCTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0000003 GO:0000075 GO:0000228 GO:0000278 GO:0000280 GO:0000775 GO:0000776 GO:0000777 GO:0000778 GO:0000779 GO:0000780 GO:0000793 GO:0000794 GO:0000819 GO:0000940 GO:0000942 GO:0003674 GO:0003824 GO:0004672 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005654 GO:0005694 GO:0005737 GO:0005829 GO:0006464 GO:0006468 GO:0006793 GO:0006796 GO:0006807 GO:0006996 GO:0007049 GO:0007059 GO:0007062 GO:0007063 GO:0007088 GO:0007093 GO:0007094 GO:0007135 GO:0007346 GO:0008150 GO:0008152 GO:0009966 GO:0009967 GO:0009987 GO:0010564 GO:0010639 GO:0010646 GO:0010647 GO:0010941 GO:0010942 GO:0010948 GO:0010965 GO:0016043 GO:0016301 GO:0016310 GO:0016740 GO:0016772 GO:0016773 GO:0019538 GO:0022402 GO:0022414 GO:0023051 GO:0023056 GO:0030071 GO:0031577 GO:0031974 GO:0031981 GO:0032991 GO:0033043 GO:0033044 GO:0033045 GO:0033046 GO:0033047 GO:0033048 GO:0036211 GO:0042981 GO:0043065 GO:0043067 GO:0043068 GO:0043170 GO:0043226 GO:0043227 GO:0043228 GO:0043229 GO:0043231 GO:0043232 GO:0043233 GO:0043412 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0044422 GO:0044424 GO:0044427 GO:0044428 GO:0044444 GO:0044446 GO:0044454 GO:0044464 GO:0045132 GO:0045144 GO:0045786 GO:0045839 GO:0045841 GO:0045930 GO:0048285 GO:0048518 GO:0048519 GO:0048522 GO:0048523 GO:0048583 GO:0048584 GO:0050789 GO:0050794 GO:0051128 GO:0051129 GO:0051177 GO:0051276 GO:0051321 GO:0051726 GO:0051754 GO:0051783 GO:0051784 GO:0051983 GO:0051985 GO:0061983 GO:0065007 GO:0070013 GO:0070192 GO:0070601 GO:0071173 GO:0071174 GO:0071704 GO:0071840 GO:0098687 GO:0098813 GO:0140013 GO:0140096 GO:1901564 GO:1901987 GO:1901988 GO:1901990 GO:1901991 GO:1902099 GO:1902100 GO:1902531 GO:1902533 GO:1903046 GO:1903047 GO:1905818 GO:1905819 GO:2000816 GO:2001233 GO:2001235 GO:2001242 GO:2001244 GO:2001251
Pfam Domains
Protein Families

Protein Analysis

185

Amino Acids

21.06

Weight (kDa)

6.58

Isoelectric Point (pI)

29.85

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes

No orthologs found for this gene in the current database.

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 1 cut(s) 255
AccI GTMKAC 1 cut(s) 225
AclWI GGATC 1 cut(s) 151
AcsI RAATTY 1 cut(s) 176
AfaI GTAC 1 cut(s) 352
AfiI CCNNNNNNNGG 1 cut(s) 427
AflIII ACRYGT 1 cut(s) 347
AgsI TTSAA 2 cut(s) 91, 478
AluBI AGCT 1 cut(s) 540
AluI AGCT 1 cut(s) 540
AlwI GGATC 1 cut(s) 151
AlwNI CAGNNNCTG 1 cut(s) 552
AoxI GGCC 2 cut(s) 127, 329
ApeKI GCWGC 1 cut(s) 381
ApoI RAATTY 1 cut(s) 176
Asp700I GAANNNNTTC 1 cut(s) 177
AspS9I GGNCC 1 cut(s) 194
AsuC2I CCSGG 1 cut(s) 521
AsuHPI GGTGA 1 cut(s) 410
AvaII GGWCC 1 cut(s) 194
BauI CACGAG 1 cut(s) 147
BbvI GCAGC 1 cut(s) 368
BccI CCATC 1 cut(s) 423
BclI TGATCA 1 cut(s) 205
BcnI CCSGG 1 cut(s) 521
BfaI CTAG 2 cut(s) 50, 120
BfuAI ACCTGC 1 cut(s) 255
BisI GCNGC 1 cut(s) 382
BlsI GCNGC 1 cut(s) 383
Bme1390I CCNGG 1 cut(s) 521
Bme18I GGWCC 1 cut(s) 194
BmgT120I GGNCC 1 cut(s) 194
BmrFI CCNGG 1 cut(s) 521
BmrI ACTGGG 1 cut(s) 238
BmsI GCATC 3 cut(s) 81, 259, 368
BmuI ACTGGG 1 cut(s) 238
BpmI CTGGAG 1 cut(s) 504
BpuMI CCSGG 1 cut(s) 521
BsaAI YACGTR 1 cut(s) 350
BsaJI CCNNGG 3 cut(s) 197, 332, 519
Bsc4I CCNNNNNNNGG 1 cut(s) 427
Bse1I ACTGG 2 cut(s) 233, 472
BseDI CCNNGG 3 cut(s) 197, 332, 519
BseLI CCNNNNNNNGG 1 cut(s) 427
BseNI ACTGG 2 cut(s) 233, 472
BseXI GCAGC 1 cut(s) 368
BshFI GGCC 2 cut(s) 129, 331
BsiSI CCGG 3 cut(s) 141, 289, 521
BsiWI CGTACG 1 cut(s) 350
BslI CCNNNNNNNGG 1 cut(s) 427
BsnI GGCC 2 cut(s) 129, 331
Bsp143I GATC 3 cut(s) 143, 205, 549
Bsp19I CCATGG 1 cut(s) 332
BspANI GGCC 2 cut(s) 129, 331
BspMI ACCTGC 1 cut(s) 255
BspPI GGATC 1 cut(s) 151
BsrI ACTGG 2 cut(s) 233, 472
BssECI CCNNGG 3 cut(s) 197, 332, 519
BssMI GATC 3 cut(s) 143, 205, 549
BssSI CACGAG 1 cut(s) 147
BssT1I CCWWGG 1 cut(s) 332
Bst2BI CACGAG 1 cut(s) 147
Bst6I CTCTTC 1 cut(s) 229
BstBAI YACGTR 1 cut(s) 350
BstDSI CCRYGG 2 cut(s) 197, 332
BstKTI GATC 3 cut(s) 146, 208, 552
BstMBI GATC 3 cut(s) 143, 205, 549
BstMWI GCNNNNNNNGC 1 cut(s) 46
BstNSI RCATGY 1 cut(s) 49
BstSCI CCNGG 1 cut(s) 519
BstV1I GCAGC 1 cut(s) 368
BstX2I RGATCY 2 cut(s) 143, 549
BstYI RGATCY 2 cut(s) 143, 549
BsuRI GGCC 2 cut(s) 129, 331
BtgI CCRYGG 2 cut(s) 197, 332
BveI ACCTGC 1 cut(s) 255
CaiI CAGNNNCTG 1 cut(s) 552
Cfr13I GGNCC 1 cut(s) 194
Csp6I GTAC 1 cut(s) 351
CviAII CATG 5 cut(s) 46, 62, 80, 333, 396
CviJI RGCY 8 cut(s) 94, 129, 140, 202, 331, 518, 524, 540
CviKI_1 RGCY 8 cut(s) 94, 129, 140, 202, 331, 518, 524, 540
CviQI GTAC 1 cut(s) 351
DpnI GATC 3 cut(s) 145, 207, 551
DpnII GATC 3 cut(s) 143, 205, 549
DraI TTTAAA 1 cut(s) 459
Eam1104I CTCTTC 1 cut(s) 229
EarI CTCTTC 1 cut(s) 229
Eco130I CCWWGG 1 cut(s) 332
Eco47I GGWCC 1 cut(s) 194
EcoT14I CCWWGG 1 cut(s) 332
EcoT22I ATGCAT 1 cut(s) 20
ErhI CCWWGG 1 cut(s) 332
FaeI CATG 5 cut(s) 49, 65, 83, 336, 399
FatI CATG 5 cut(s) 45, 61, 79, 332, 395
FbaI TGATCA 1 cut(s) 205
FblI GTMKAC 1 cut(s) 225
Fnu4HI GCNGC 1 cut(s) 382
Fsp4HI GCNGC 1 cut(s) 382
FspBI CTAG 2 cut(s) 50, 120
GluI GCNGC 1 cut(s) 382
GsuI CTGGAG 1 cut(s) 504
HaeIII GGCC 2 cut(s) 129, 331
HapII CCGG 3 cut(s) 141, 289, 521
Hin1II CATG 5 cut(s) 49, 65, 83, 336, 399
HincII GTYRAC 1 cut(s) 226
HindII GTYRAC 1 cut(s) 226
HinfI GANTC 1 cut(s) 356
HpaII CCGG 3 cut(s) 141, 289, 521
HphI GGTGA 1 cut(s) 410
Hpy166II GTNNAC 2 cut(s) 226, 276
Hpy188I TCNGA 1 cut(s) 554
Hpy188III TCNNGA 5 cut(s) 149, 182, 260, 297, 483
Hpy8I GTNNAC 2 cut(s) 226, 276
HpyAV CCTTC 1 cut(s) 418
HpyCH4IV ACGT 1 cut(s) 349
HpyCH4V TGCA 6 cut(s) 18, 61, 250, 319, 384, 546
HpyF10VI GCNNNNNNNGC 1 cut(s) 46
HpySE526I ACGT 1 cut(s) 349
Hsp92II CATG 5 cut(s) 49, 65, 83, 336, 399
Ksp22I TGATCA 1 cut(s) 205
Kzo9I GATC 3 cut(s) 143, 205, 549
Lsp1109I GCAGC 1 cut(s) 368
LweI GCATC 3 cut(s) 81, 259, 368
MaeI CTAG 2 cut(s) 50, 120
MaeII ACGT 1 cut(s) 349
MaeIII GTNAC 3 cut(s) 149, 430, 526
MalI GATC 3 cut(s) 145, 207, 551
MboI GATC 3 cut(s) 143, 205, 549
MboII GAAGA 4 cut(s) 17, 182, 185, 246
MflI RGATCY 2 cut(s) 143, 549
MluCI AATT 4 cut(s) 100, 176, 387, 401
MlyI GAGTC 1 cut(s) 350
MnlI CCTC 2 cut(s) 230, 479
Mph1103I ATGCAT 1 cut(s) 20
MroXI GAANNNNTTC 1 cut(s) 177
MseI TTAA 3 cut(s) 458, 497, 509
MslI CAYNNNNRTG 1 cut(s) 35
MspI CCGG 3 cut(s) 141, 289, 521
MspR9I CCNGG 1 cut(s) 521
MwoI GCNNNNNNNGC 1 cut(s) 46
NciI CCSGG 1 cut(s) 521
NcoI CCATGG 1 cut(s) 332
NdeII GATC 3 cut(s) 143, 205, 549
NlaIII CATG 5 cut(s) 49, 65, 83, 336, 399
NmuCI GTSAC 2 cut(s) 149, 430
NsiI ATGCAT 1 cut(s) 20
NspI RCATGY 1 cut(s) 49
PdmI GAANNNNTTC 1 cut(s) 177
Pfl23II CGTACG 1 cut(s) 350
PkrI GCNGC 1 cut(s) 383
PleI GAGTC 1 cut(s) 350
PpsI GAGTC 1 cut(s) 350
Ppu21I YACGTR 1 cut(s) 350
PspLI CGTACG 1 cut(s) 350
PspPI GGNCC 1 cut(s) 194
PsrI GAACNNNNNNTAC 2 cut(s) 148, 180
PstNI CAGNNNCTG 1 cut(s) 552
PsuI RGATCY 2 cut(s) 143, 549
RsaI GTAC 1 cut(s) 352
RsaNI GTAC 1 cut(s) 351
RseI CAYNNNNRTG 1 cut(s) 35
SalI GTCGAC 1 cut(s) 224
SaqAI TTAA 3 cut(s) 458, 497, 509
SatI GCNGC 1 cut(s) 382
Sau3AI GATC 3 cut(s) 143, 205, 549
Sau96I GGNCC 1 cut(s) 194
SchI GAGTC 1 cut(s) 350
ScrFI CCNGG 1 cut(s) 521
SetI ASST 4 cut(s) 249, 352, 429, 542
SfaNI GCATC 3 cut(s) 81, 259, 368
SinI GGWCC 1 cut(s) 194
SmiMI CAYNNNNRTG 1 cut(s) 35
Sse9I AATT 4 cut(s) 100, 176, 387, 401
SspMI CTAG 2 cut(s) 50, 120
StyD4I CCNGG 1 cut(s) 519
StyI CCWWGG 1 cut(s) 332
TaiI ACGT 1 cut(s) 352
TaqI TCGA 1 cut(s) 225
TasI AATT 4 cut(s) 100, 176, 387, 401
Tru1I TTAA 3 cut(s) 458, 497, 509
Tru9I TTAA 3 cut(s) 458, 497, 509
TseFI GTSAC 2 cut(s) 149, 430
TseI GCWGC 1 cut(s) 381
Tsp45I GTSAC 2 cut(s) 149, 430
TspDTI ATGAA 1 cut(s) 68
TspGWI ACGGA 2 cut(s) 186, 368
VpaK11BI GGWCC 1 cut(s) 194
XapI RAATTY 1 cut(s) 176
XceI RCATGY 1 cut(s) 49
XmiI GTMKAC 1 cut(s) 225
XmnI GAANNNNTTC 1 cut(s) 177
XspI CTAG 2 cut(s) 50, 120
Zsp2I ATGCAT 1 cut(s) 20
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.