pycom17g24630

lanC-like protein GCL2

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr17
N/A
Physical Location & Seq
Forward (+)
22877281 .. 22878145
865 bp
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UTR
Exon/CDS
Intron
N/A

Sequence Viewer

Length: 240 bp
ATGTTCTTGTGCACTGGTGTCATGGGACCCGGAATTGCCCTCACGCTTGCCAAAACTGCTAAGATTTTCCATGGCATTAGTGGAAACGCATACGTGTTCCTCTCGCTCTACCAACTGACAGGAAATAGTCACAAGCTTATATCACAGGGTGAGATGCAGAGAGGTAATAGCCCCTACTTCTTGTTTGAAGGAGTTGGACGCATGGCTTATCTTTTTTTGGACATGGTTGAACTTTCTTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

80

Amino Acids

8.65

Weight (kDa)

7.91

Isoelectric Point (pI)

11.52

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes

No orthologs found for this gene in the current database.

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AdeI CACNNNGTG 1 cut(s) 149
AflIII ACRYGT 1 cut(s) 93
AgsI TTSAA 2 cut(s) 188, 230
AluBI AGCT 1 cut(s) 136
AluI AGCT 1 cut(s) 136
Alw21I GWGCWC 1 cut(s) 14
Alw44I GTGCAC 1 cut(s) 10
ApaLI GTGCAC 1 cut(s) 10
AspS9I GGNCC 1 cut(s) 26
AsuC2I CCSGG 1 cut(s) 30
AsuHPI GGTGA 1 cut(s) 161
AvaII GGWCC 1 cut(s) 26
BaeGI GKGCMC 1 cut(s) 14
Bbv12I GWGCWC 1 cut(s) 14
BcnI CCSGG 1 cut(s) 30
Bme1390I CCNGG 1 cut(s) 30
Bme18I GGWCC 1 cut(s) 26
BmgT120I GGNCC 1 cut(s) 26
BmiI GGNNCC 2 cut(s) 27, 28
BmrFI CCNGG 1 cut(s) 30
BmsI GCATC 1 cut(s) 144
BpuMI CCSGG 1 cut(s) 30
BsaAI YACGTR 1 cut(s) 94
BsaJI CCNNGG 1 cut(s) 70
Bse1I ACTGG 1 cut(s) 19
BseDI CCNNGG 1 cut(s) 70
BseNI ACTGG 1 cut(s) 19
BseSI GKGCMC 1 cut(s) 14
BsiHKAI GWGCWC 1 cut(s) 14
BsiSI CCGG 1 cut(s) 30
BslFI GGGAC 1 cut(s) 39
BsmFI GGGAC 1 cut(s) 39
Bsp1286I GDGCHC 1 cut(s) 14
Bsp19I CCATGG 1 cut(s) 70
BspLI GGNNCC 2 cut(s) 27, 28
BsrI ACTGG 1 cut(s) 19
BssECI CCNNGG 1 cut(s) 70
BssT1I CCWWGG 1 cut(s) 70
BstBAI YACGTR 1 cut(s) 94
BstC8I GCNNGC 1 cut(s) 48
BstDEI CTNAG 2 cut(s) 60, 237
BstDSI CCRYGG 1 cut(s) 70
BstMWI GCNNNNNNNGC 1 cut(s) 56
BstSCI CCNGG 1 cut(s) 28
BstSLI GKGCMC 1 cut(s) 14
BtgI CCRYGG 1 cut(s) 70
BtsIMutI CAGTG 1 cut(s) 12
Cac8I GCNNGC 1 cut(s) 48
Cfr13I GGNCC 1 cut(s) 26
CseI GACGC 1 cut(s) 207
CviAII CATG 4 cut(s) 22, 71, 202, 223
CviJI RGCY 3 cut(s) 136, 171, 206
CviKI_1 RGCY 3 cut(s) 136, 171, 206
DdeI CTNAG 2 cut(s) 60, 237
DraIII CACNNNGTG 1 cut(s) 149
Eco130I CCWWGG 1 cut(s) 70
Eco47I GGWCC 1 cut(s) 26
EcoO109I RGGNCCY 1 cut(s) 26
EcoT14I CCWWGG 1 cut(s) 70
ErhI CCWWGG 1 cut(s) 70
FaeI CATG 4 cut(s) 25, 74, 205, 226
FaiI YATR 6 cut(s) 23, 72, 91, 140, 203, 224
FaqI GGGAC 1 cut(s) 39
FatI CATG 4 cut(s) 21, 70, 201, 222
HapII CCGG 1 cut(s) 30
HgaI GACGC 1 cut(s) 207
Hin1II CATG 4 cut(s) 25, 74, 205, 226
HindIII AAGCTT 1 cut(s) 134
HpaII CCGG 1 cut(s) 30
HphI GGTGA 1 cut(s) 161
Hpy166II GTNNAC 1 cut(s) 12
Hpy8I GTNNAC 1 cut(s) 12
HpyAV CCTTC 1 cut(s) 182
HpyCH4IV ACGT 1 cut(s) 93
HpyCH4V TGCA 2 cut(s) 12, 157
HpyF10VI GCNNNNNNNGC 1 cut(s) 56
HpyF3I CTNAG 2 cut(s) 60, 237
HpySE526I ACGT 1 cut(s) 93
Hsp92II CATG 4 cut(s) 25, 74, 205, 226
KflI GGGWCCC 1 cut(s) 26
LpnPI CCDG 3 cut(s) 43, 105, 131
LweI GCATC 1 cut(s) 144
MaeII ACGT 1 cut(s) 93
MaeIII GTNAC 1 cut(s) 128
MhlI GDGCHC 1 cut(s) 14
MluCI AATT 1 cut(s) 33
MmeI TCCRAC 1 cut(s) 175
MnlI CCTC 3 cut(s) 50, 110, 155
MspI CCGG 1 cut(s) 30
MspR9I CCNGG 1 cut(s) 30
MwoI GCNNNNNNNGC 1 cut(s) 56
NciI CCSGG 1 cut(s) 30
NcoI CCATGG 1 cut(s) 70
NlaIII CATG 4 cut(s) 25, 74, 205, 226
NlaIV GGNNCC 2 cut(s) 27, 28
NmuCI GTSAC 1 cut(s) 128
Ppu21I YACGTR 1 cut(s) 94
PpuMI RGGWCCY 1 cut(s) 26
Psp5II RGGWCCY 1 cut(s) 26
PspN4I GGNNCC 2 cut(s) 27, 28
PspPI GGNCC 1 cut(s) 26
PspPPI RGGWCCY 1 cut(s) 26
Sau96I GGNCC 1 cut(s) 26
ScrFI CCNGG 1 cut(s) 30
SduI GDGCHC 1 cut(s) 14
SetI ASST 3 cut(s) 96, 138, 166
SfaNI GCATC 1 cut(s) 144
SinI GGWCC 1 cut(s) 26
Sse9I AATT 1 cut(s) 33
StyD4I CCNGG 1 cut(s) 28
StyI CCWWGG 1 cut(s) 70
TaiI ACGT 1 cut(s) 96
TasI AATT 1 cut(s) 33
TscAI CASTG 1 cut(s) 19
TseFI GTSAC 1 cut(s) 128
Tsp45I GTSAC 1 cut(s) 128
TspRI CASTG 1 cut(s) 19
VneI GTGCAC 1 cut(s) 10
VpaK11BI GGWCC 1 cut(s) 26
XcmI CCANNNNNNNNNTGG 1 cut(s) 77
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.