pycom290g00190

Inositol-tetrakisphosphate 1-kinase

Basic Information

Type: gene
Biological Identity
pyrus_communis
SuperScaffold_290
N/A
Physical Location & Seq
Forward (+)
137606 .. 138411
806 bp
Loading structure...
UTR
Exon/CDS
Intron
N/A

Sequence Viewer

Length: 450 bp
ATGAAGTTGGAATATGTGGATCATTCATCAACGCTCTACAAATTTTACGTCTTGGGCGAGAAAGTTTATCATGCGTTTAAGAGCTCTACTCCAAATGCAGATGGCTTGGAGAAATTATCTGGGAGTAATGAGCTCAAACCGTTAGTCTTTGACAGCTTAAAATCCTTATTCACTGCCAAAGGGAACCTGAATTTTGGAGATGGTAATAGCTCAAAGGCCACTAATAACTGCACTGATCTTGAGTTGGTAACTAGTGCAGCTAATTGGCTTATGAGAAAGCTTGGACTGACCTTCTTCGGCTTCGATGTTGTTATTGAGGAAGGCACCGGCGACCATGTCATTGTTGATGTAAATTACCTCCCATCATTCAAAGAAGTTCCCAACGAAGTTGCTATCCCTGCGTTTAGGGATGCGATTAAGAAGAAATTTGAATTAAAAAGGAGGAAATAA

Protein Analysis

150

Amino Acids

16.67

Weight (kDa)

7.8

Isoelectric Point (pI)

21.68

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Ins134_P3_kin PF05770 4 - 128 7.1e-14 Inositol 1,3,4-trisphosphate 5/6-kinase ATP-grasp domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

Orthologous Genes

No orthologs found for this gene in the current database.

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB1I GGYRCC 1 cut(s) 323
AclWI GGATC 1 cut(s) 27
AcsI RAATTY 3 cut(s) 41, 190, 425
AgsI TTSAA 2 cut(s) 370, 431
AhlI ACTAGT 1 cut(s) 251
AluBI AGCT 6 cut(s) 84, 133, 156, 210, 260, 280
AluI AGCT 6 cut(s) 84, 133, 156, 210, 260, 280
Alw21I GWGCWC 2 cut(s) 86, 135
AlwI GGATC 1 cut(s) 27
AoxI GGCC 1 cut(s) 216
ApeKI GCWGC 1 cut(s) 257
ApoI RAATTY 3 cut(s) 41, 190, 425
ArsI GACNNNNNNTTYG 4 cut(s) 33, 65, 129, 161
BanI GGYRCC 1 cut(s) 323
BanII GRGCYC 2 cut(s) 86, 135
Bbv12I GWGCWC 2 cut(s) 86, 135
BbvI GCAGC 1 cut(s) 269
BccI CCATC 3 cut(s) 95, 194, 370
BcuI ACTAGT 1 cut(s) 251
BfaI CTAG 1 cut(s) 252
BisI GCNGC 1 cut(s) 258
BlsI GCNGC 1 cut(s) 259
BmiI GGNNCC 2 cut(s) 185, 325
BmsI GCATC 1 cut(s) 400
BplI GAGNNNNNCTC 2 cut(s) 73, 105
BpuEI CTTGAG 1 cut(s) 260
Bse118I RCCGGY 1 cut(s) 326
BseGI GGATG 1 cut(s) 415
BseXI GCAGC 1 cut(s) 269
BsgI GTGCAG 2 cut(s) 214, 276
BshFI GGCC 1 cut(s) 218
BshNI GGYRCC 1 cut(s) 323
BsiHKAI GWGCWC 2 cut(s) 86, 135
BsiSI CCGG 1 cut(s) 327
BsnI GGCC 1 cut(s) 218
Bsp1286I GDGCHC 2 cut(s) 86, 135
Bsp143I GATC 2 cut(s) 19, 235
BspANI GGCC 1 cut(s) 218
BspLI GGNNCC 2 cut(s) 185, 325
BspPI GGATC 1 cut(s) 27
BspT107I GGYRCC 1 cut(s) 323
BsrFI RCCGGY 1 cut(s) 326
BssAI RCCGGY 1 cut(s) 326
BssMI GATC 2 cut(s) 19, 235
Bst4CI ACNGT 1 cut(s) 141
BstF5I GGATG 1 cut(s) 415
BstKTI GATC 2 cut(s) 22, 238
BstMBI GATC 2 cut(s) 19, 235
BstMWI GCNNNNNNNGC 1 cut(s) 398
BstV1I GCAGC 1 cut(s) 269
BsuRI GGCC 1 cut(s) 218
BtsCI GGATG 1 cut(s) 415
BtsI GCAGTG 1 cut(s) 171
BtsIMutI CAGTG 2 cut(s) 171, 231
Cfr10I RCCGGY 1 cut(s) 326
CviAII CATG 2 cut(s) 71, 335
DpnI GATC 2 cut(s) 21, 237
DpnII GATC 2 cut(s) 19, 235
Ecl136II GAGCTC 2 cut(s) 84, 133
Eco24I GRGCYC 2 cut(s) 86, 135
Eco53kI GAGCTC 2 cut(s) 84, 133
EcoICRI GAGCTC 2 cut(s) 84, 133
EcoT38I GRGCYC 2 cut(s) 86, 135
FaeI CATG 2 cut(s) 74, 338
FaiI YATR 4 cut(s) 15, 72, 272, 336
FatI CATG 2 cut(s) 70, 334
Fnu4HI GCNGC 1 cut(s) 258
FokI GGATG 1 cut(s) 422
FriOI GRGCYC 2 cut(s) 86, 135
Fsp4HI GCNGC 1 cut(s) 258
FspBI CTAG 1 cut(s) 252
GluI GCNGC 1 cut(s) 258
HaeIII GGCC 1 cut(s) 218
HapII CCGG 1 cut(s) 327
Hin1II CATG 2 cut(s) 74, 338
HindIII AAGCTT 1 cut(s) 278
HpaII CCGG 1 cut(s) 327
Hpy188III TCNNGA 1 cut(s) 239
HpyAV CCTTC 2 cut(s) 301, 314
HpyCH4III ACNGT 1 cut(s) 141
HpyCH4IV ACGT 1 cut(s) 48
HpyCH4V TGCA 3 cut(s) 98, 231, 257
HpyF10VI GCNNNNNNNGC 1 cut(s) 398
HpySE526I ACGT 1 cut(s) 48
Hsp92II CATG 2 cut(s) 74, 338
Kzo9I GATC 2 cut(s) 19, 235
LpnPI CCDG 4 cut(s) 105, 200, 340, 411
Lsp1109I GCAGC 1 cut(s) 269
LweI GCATC 1 cut(s) 400
MaeI CTAG 1 cut(s) 252
MaeII ACGT 1 cut(s) 48
MaeIII GTNAC 1 cut(s) 247
MalI GATC 2 cut(s) 21, 237
MboI GATC 2 cut(s) 19, 235
MboII GAAGA 2 cut(s) 286, 433
MhlI GDGCHC 2 cut(s) 86, 135
MluCI AATT 7 cut(s) 41, 113, 190, 262, 352, 425, 431
MnlI CCTC 3 cut(s) 310, 368, 435
MseI TTAA 4 cut(s) 78, 158, 417, 434
MspI CCGG 1 cut(s) 327
MwoI GCNNNNNNNGC 1 cut(s) 398
NdeII GATC 2 cut(s) 19, 235
NlaIII CATG 2 cut(s) 74, 338
NlaIV GGNNCC 2 cut(s) 185, 325
PcsI WCGNNNNNNNCGW 1 cut(s) 54
PflFI GACNNNGTC 1 cut(s) 335
PkrI GCNGC 1 cut(s) 259
Psp124BI GAGCTC 2 cut(s) 86, 135
PspN4I GGNNCC 2 cut(s) 185, 325
PsyI GACNNNGTC 1 cut(s) 335
SacI GAGCTC 2 cut(s) 86, 135
SaqAI TTAA 4 cut(s) 78, 158, 417, 434
SatI GCNGC 1 cut(s) 258
Sau3AI GATC 2 cut(s) 19, 235
SduI GDGCHC 2 cut(s) 86, 135
SfaNI GCATC 1 cut(s) 400
SgrAI CRCCGGYG 1 cut(s) 326
SmlI CTYRAG 1 cut(s) 239
SmoI CTYRAG 1 cut(s) 239
SpeI ACTAGT 1 cut(s) 251
Sse9I AATT 7 cut(s) 41, 113, 190, 262, 352, 425, 431
SspMI CTAG 1 cut(s) 252
SstI GAGCTC 2 cut(s) 86, 135
TaaI ACNGT 1 cut(s) 141
TaiI ACGT 1 cut(s) 51
TaqI TCGA 1 cut(s) 303
TasI AATT 7 cut(s) 41, 113, 190, 262, 352, 425, 431
Tru1I TTAA 4 cut(s) 78, 158, 417, 434
Tru9I TTAA 4 cut(s) 78, 158, 417, 434
TscAI CASTG 2 cut(s) 178, 238
TseI GCWGC 1 cut(s) 257
TspDTI ATGAA 2 cut(s) 15, 17
TspRI CASTG 2 cut(s) 178, 238
Tth111I GACNNNGTC 1 cut(s) 335
XapI RAATTY 3 cut(s) 41, 190, 425
XspI CTAG 1 cut(s) 252
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.