pycom420g00440

magnesium transporter

Basic Information

Type: gene
Biological Identity
pyrus_communis
SuperScaffold_420
N/A
Physical Location & Seq
Reverse (-)
555414 .. 557994
2581 bp
Loading structure...
UTR
Exon/CDS
Intron
N/A

Sequence Viewer

Length: 1590 bp
ATGATTTCTGCACCCTCTTGGGGATCTCAAGACTTTGATCCTCGAAAAGATTTACGACATGCTTCATTATACACAGAACTGAACTTGGTGAAGCAGAAGAATAAAGCATGGGAGTCTTCTTTGAATAGTGTAAATAACCTGGGCGGCCTTCCTTCTGCCAGGGATAACATTATTCTTCAGAGTTCAAGATCATTATCTACACCACAAGAAGCTGATGGGATTGCCTCTACAGCGAGTGAAAAGCAGGATCATTTTGATTCTGGTCTTCATGATCCAAAGGCTTCTTCTAAGAGAAAGGACAATTCCAATGCTAAGCCTTATGCATCTGAGACAGATGCAAAACGTGCTAAACAGTATGTAGTTTCTTTAGTATTTTACCCAAGAAGTTCATTGGCCCTCCCCCTTCCCCTTTTCCCTCGCCGCCGCAGCCGTTTCGATCTCCTCCCCCCTCCAATGGAGAAGGCCATGGTGGTTAATTTAGAGTTTATAAAGGCTATAGTTACAGCGGAAGTGGTTTTGTTGCTTGATCCTCTTCGGCAGGAGGTTCTTCCATTTGCGGATCAGCTAAGGCAACAACTTCCTCAGAAAAGGCAATCCAGGATAGAAGAAGCTAGTCCGCTTGATGAACAAGTTAGTGGAATGAATGTTTCAACCGGAAGGCAATGGTTACTTGTTCCTGAAGCCGTTGAAGGTGTGCAGTGTGATCTCCCATTTGAGTTTCAGGTTCTGGAGATTGCATTAGAAGTTGTCTGTACATACTTGAATTCTAGTGTGTCAGACCTTGAGAGAGAATCCTACACTGTTTTAGATGAACTGATCAGAAATGTTAGCACCAAAAACCTTGAACTTTTGACAAGTTTGAAAAGCGATCTTACGCATTTGGTTGCATGTGTACAGAAGGTATTCACATGGAAATACATGGCCACCACCTTTTCAAGAGGAGGAGATACCGGAATTGTAATCATCAGTGTTGCGACTGAAATTTTTGGTACTTTTGAGGAGTCCTACATAGAGAATGCAGTGTTGGTGACCAAGGGCAAAGAAGTGAAATATAAAACAATGCTTCATTTGGTAGCTAGTTTGGACCTTTCCAGCAACATGTTATATGGAGAAATCCCTAAAGAGCTGACCAGCCTCATTAGCTTAGAAATGTTGAATTTATCTAATAATCTTTTGACCGGAAGAATCCCTTCCAAAATCGGTGATATGGGAACATTAGAGTCGCTTGATTTGTCCGTGAACCAACTTTCTGGCGAAATTTCTCTAAGCGTCTCTAATTTGACATTTCTCGATTACCTGAATTTGTCCTATAGCAATCTGATAGGGCAGATTGCAAAAAGCGTTCAACTTCAAAGCTTTGATCTGTCCAGTTATGCTGGGAATAAACTTTGCGGACCTCCATTGCTGGAGTGCTGCAGTACAAATGAGGCCATGCCACCGATAGGTGATGAGAAGCGCGAAGAAGATCATTTACTTGAAAATAGTAGGTTCTATCTGAGCTTGGGGCTCGGATTTGCATTCGGGTTTTGTATTGTTCTTGGTTCATTGATGTCCAATGTGCCAAGGAGCAATGCATTTTCTCAGTTCTAG

Protein Analysis

530

Amino Acids

58.67

Weight (kDa)

5.17

Isoelectric Point (pI)

55.44

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes

No orthologs found for this gene in the current database.

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 488
AccII CGCG 1 cut(s) 1458
AciI CCGC 7 cut(s) 144, 421, 424, 506, 557, 617, 1392
AclWI GGATC 6 cut(s) 31, 32, 255, 266, 521, 567
AcoI YGGCCR 1 cut(s) 921
AcsI RAATTY 5 cut(s) 763, 981, 1156, 1257, 1300
AcuI CTGAAG 2 cut(s) 161, 699
AfaI GTAC 4 cut(s) 754, 894, 991, 1420
AfiI CCNNNNNNNGG 3 cut(s) 20, 454, 1442
AflIII ACRYGT 1 cut(s) 1098
AjnI CCWGG 3 cut(s) 138, 158, 596
AjuI GAANNNNNNNTTGG 4 cut(s) 268, 300, 1007, 1039
AluBI AGCT 8 cut(s) 212, 565, 611, 1076, 1126, 1143, 1356, 1500
AluI AGCT 8 cut(s) 212, 565, 611, 1076, 1126, 1143, 1356, 1500
Alw26I GTCTC 2 cut(s) 323, 1276
AlwI GGATC 6 cut(s) 31, 32, 255, 266, 521, 567
AlwNI CAGNNNCTG 1 cut(s) 727
AoxI GGCC 5 cut(s) 145, 393, 462, 921, 1428
ApeKI GCWGC 2 cut(s) 426, 1413
ApoI RAATTY 5 cut(s) 763, 981, 1156, 1257, 1300
Asp700I GAANNNNTTC 2 cut(s) 902, 1189
AspLEI GCGC 1 cut(s) 1458
AspS9I GGNCC 3 cut(s) 394, 1084, 1394
AsuHPI GGTGA 4 cut(s) 100, 1039, 1214, 1457
AvaII GGWCC 2 cut(s) 1084, 1394
BalI TGGCCA 1 cut(s) 923
BanII GRGCYC 1 cut(s) 1509
BarI GAAGNNNNNNTAC 2 cut(s) 1455, 1487
BbsI GAAGAC 2 cut(s) 108, 257
BbvI GCAGC 2 cut(s) 438, 1400
BccI CCATC 1 cut(s) 209
BceAI ACGGC 2 cut(s) 414, 668
BcgI CGANNNNNNTGC 2 cut(s) 415, 449
BciT130I CCWGG 3 cut(s) 140, 160, 598
BclI TGATCA 1 cut(s) 816
BcoDI GTCTC 2 cut(s) 323, 1276
BfaI CTAG 4 cut(s) 612, 768, 1077, 1588
BfmI CTRYAG 4 cut(s) 228, 495, 1309, 1414
BisI GCNGC 5 cut(s) 145, 421, 424, 427, 1414
BlpI GCTNAGC 1 cut(s) 312
BlsI GCNGC 5 cut(s) 146, 422, 425, 428, 1415
Bme1390I CCNGG 3 cut(s) 140, 160, 598
Bme18I GGWCC 2 cut(s) 1084, 1394
BmgT120I GGNCC 3 cut(s) 394, 1084, 1394
BmrFI CCNGG 3 cut(s) 140, 160, 598
BmsI GCATC 2 cut(s) 325, 332
BpiI GAAGAC 2 cut(s) 108, 257
BpmI CTGGAG 2 cut(s) 749, 1427
Bpu10I CCTNAGC 1 cut(s) 566
Bpu1102I GCTNAGC 1 cut(s) 312
BpuEI CTTGAG 2 cut(s) 12, 803
BsaBI GATNNNNATC 1 cut(s) 193
BsaJI CCNNGG 5 cut(s) 139, 159, 465, 1032, 1562
BsaWI WCCGGW 3 cut(s) 653, 950, 1178
Bsc4I CCNNNNNNNGG 3 cut(s) 20, 454, 1442
Bse1I ACTGG 1 cut(s) 1368
Bse3DI GCAATG 3 cut(s) 668, 1400, 1576
Bse8I GATNNNNATC 1 cut(s) 193
BseBI CCWGG 3 cut(s) 140, 160, 598
BseDI CCNNGG 5 cut(s) 139, 159, 465, 1032, 1562
BseJI GATNNNNATC 1 cut(s) 193
BseLI CCNNNNNNNGG 3 cut(s) 20, 454, 1442
BseMI GCAATG 3 cut(s) 668, 1400, 1576
BseMII CTCAG 3 cut(s) 318, 596, 1487
BseNI ACTGG 1 cut(s) 1368
BseRI GAGGAG 4 cut(s) 431, 954, 957, 1013
BseXI GCAGC 2 cut(s) 438, 1400
BseYI CCCAGC 1 cut(s) 1376
BsgI GTGCAG 1 cut(s) 716
Bsh1236I CGCG 1 cut(s) 1458
BshFI GGCC 5 cut(s) 147, 395, 464, 923, 1430
BsiSI CCGG 3 cut(s) 654, 951, 1179
BslI CCNNNNNNNGG 3 cut(s) 20, 454, 1442
BsmAI GTCTC 2 cut(s) 323, 1276
BsmBI CGTCTC 1 cut(s) 1276
BsmI GAATGC 2 cut(s) 1021, 1517
BsnI GGCC 5 cut(s) 147, 395, 464, 923, 1430
Bsp1286I GDGCHC 1 cut(s) 1509
Bsp1407I TGTACA 2 cut(s) 752, 892
Bsp1720I GCTNAGC 1 cut(s) 312
Bsp19I CCATGG 1 cut(s) 465
BspACI CCGC 7 cut(s) 144, 421, 424, 506, 557, 617, 1392
BspANI GGCC 5 cut(s) 147, 395, 464, 923, 1430
BspCNI CTCAG 3 cut(s) 319, 595, 1488
BspFNI CGCG 1 cut(s) 1458
BspHI TCATGA 1 cut(s) 268
BspMAI CTGCAG 1 cut(s) 1418
BspPI GGATC 6 cut(s) 31, 32, 255, 266, 521, 567
BsrDI GCAATG 3 cut(s) 668, 1400, 1576
BsrGI TGTACA 2 cut(s) 752, 892
BsrI ACTGG 1 cut(s) 1368
BssECI CCNNGG 5 cut(s) 139, 159, 465, 1032, 1562
BssT1I CCWWGG 3 cut(s) 465, 1032, 1562
Bst2UI CCWGG 3 cut(s) 140, 160, 598
Bst4CI ACNGT 2 cut(s) 354, 802
Bst6I CTCTTC 1 cut(s) 537
BstAPI GCANNNNNTGC 1 cut(s) 344
BstAUI TGTACA 2 cut(s) 752, 892
BstDEI CTNAG 9 cut(s) 288, 312, 327, 566, 582, 1144, 1265, 1496, 1581
BstDSI CCRYGG 1 cut(s) 465
BstEII GGTNACC 1 cut(s) 1027
BstFNI CGCG 1 cut(s) 1458
BstHHI GCGC 1 cut(s) 1458
BstMAI GTCTC 2 cut(s) 323, 1276
BstMWI GCNNNNNNNGC 4 cut(s) 230, 344, 426, 1140
BstNI CCWGG 3 cut(s) 140, 160, 598
BstNSI RCATGY 3 cut(s) 62, 891, 1102
BstPI GGTNACC 1 cut(s) 1027
BstSCI CCNGG 3 cut(s) 138, 158, 596
BstSFI CTRYAG 4 cut(s) 228, 495, 1309, 1414
BstUI CGCG 1 cut(s) 1458
BstV1I GCAGC 2 cut(s) 438, 1400
BstV2I GAAGAC 2 cut(s) 108, 257
BstX2I RGATCY 1 cut(s) 23
BstXI CCANNNNNNTGG 1 cut(s) 1250
BstYI RGATCY 1 cut(s) 23
BsuRI GGCC 5 cut(s) 147, 395, 464, 923, 1430
BtgI CCRYGG 1 cut(s) 465
BtsI GCAGTG 2 cut(s) 704, 1026
BtsIMutI CAGTG 4 cut(s) 704, 798, 973, 1026
CaiI CAGNNNCTG 1 cut(s) 727
CciI TCATGA 1 cut(s) 268
CfoI GCGC 1 cut(s) 1458
Cfr13I GGNCC 3 cut(s) 394, 1084, 1394
CseI GACGC 1 cut(s) 1258
Csp6I GTAC 4 cut(s) 753, 893, 990, 1419
CviAII CATG 9 cut(s) 59, 108, 269, 466, 888, 909, 919, 1099, 1432
CviQI GTAC 4 cut(s) 753, 893, 990, 1419
DdeI CTNAG 9 cut(s) 288, 312, 327, 566, 582, 1144, 1265, 1496, 1581
EaeI YGGCCR 1 cut(s) 921
Eam1104I CTCTTC 1 cut(s) 537
EarI CTCTTC 1 cut(s) 537
Eco130I CCWWGG 3 cut(s) 465, 1032, 1562
Eco24I GRGCYC 1 cut(s) 1509
Eco47I GGWCC 2 cut(s) 1084, 1394
Eco57I CTGAAG 2 cut(s) 161, 699
Eco91I GGTNACC 1 cut(s) 1027
EcoO65I GGTNACC 1 cut(s) 1027
EcoRI GAATTC 1 cut(s) 763
EcoRII CCWGG 3 cut(s) 138, 158, 596
EcoT14I CCWWGG 3 cut(s) 465, 1032, 1562
EcoT22I ATGCAT 2 cut(s) 325, 1576
EcoT38I GRGCYC 1 cut(s) 1509
ErhI CCWWGG 3 cut(s) 465, 1032, 1562
Esp3I CGTCTC 1 cut(s) 1276
FaeI CATG 9 cut(s) 62, 111, 272, 469, 891, 912, 922, 1102, 1435
FalI AAGNNNNNCTT 2 cut(s) 1174, 1206
FatI CATG 9 cut(s) 58, 107, 268, 465, 887, 908, 918, 1098, 1431
FbaI TGATCA 1 cut(s) 816
Fnu4HI GCNGC 5 cut(s) 145, 421, 424, 427, 1414
FriOI GRGCYC 1 cut(s) 1509
Fsp4HI GCNGC 5 cut(s) 145, 421, 424, 427, 1414
FspBI CTAG 4 cut(s) 612, 768, 1077, 1588
GlaI GCGC 1 cut(s) 1457
GluI GCNGC 5 cut(s) 145, 421, 424, 427, 1414
GsaI CCCAGC 1 cut(s) 1380
GsuI CTGGAG 2 cut(s) 749, 1427
HaeIII GGCC 5 cut(s) 147, 395, 464, 923, 1430
HapII CCGG 3 cut(s) 654, 951, 1179
HgaI GACGC 1 cut(s) 1258
HhaI GCGC 1 cut(s) 1458
Hin1II CATG 9 cut(s) 62, 111, 272, 469, 891, 912, 922, 1102, 1435
Hin6I GCGC 1 cut(s) 1456
HinP1I GCGC 1 cut(s) 1456
HindIII AAGCTT 1 cut(s) 1354
HinfI GANTC 6 cut(s) 113, 257, 791, 1001, 1185, 1220
HpaII CCGG 3 cut(s) 654, 951, 1179
HphI GGTGA 4 cut(s) 100, 1039, 1214, 1457
Hpy166II GTNNAC 2 cut(s) 893, 1240
Hpy188I TCNGA 8 cut(s) 180, 328, 585, 778, 821, 1320, 1497, 1511
Hpy188III TCNNGA 7 cut(s) 29, 186, 269, 677, 728, 936, 1289
Hpy8I GTNNAC 2 cut(s) 893, 1240
HpyAV CCTTC 8 cut(s) 158, 162, 413, 454, 651, 683, 892, 1200
HpyCH4III ACNGT 2 cut(s) 354, 802
HpyCH4IV ACGT 1 cut(s) 343
HpyF10VI GCNNNNNNNGC 4 cut(s) 230, 344, 426, 1140
HpyF3I CTNAG 9 cut(s) 288, 312, 327, 566, 582, 1144, 1265, 1496, 1581
HpySE526I ACGT 1 cut(s) 343
Hsp92II CATG 9 cut(s) 62, 111, 272, 469, 891, 912, 922, 1102, 1435
HspAI GCGC 1 cut(s) 1456
Ksp22I TGATCA 1 cut(s) 816
LmnI GCTCC 1 cut(s) 1566
Lsp1109I GCAGC 2 cut(s) 438, 1400
LweI GCATC 2 cut(s) 325, 332
MaeI CTAG 4 cut(s) 612, 768, 1077, 1588
MaeII ACGT 1 cut(s) 343
MaeIII GTNAC 3 cut(s) 499, 666, 1027
MflI RGATCY 1 cut(s) 23
MhlI GDGCHC 1 cut(s) 1509
MlsI TGGCCA 1 cut(s) 923
MluCI AATT 9 cut(s) 301, 475, 763, 954, 981, 1156, 1257, 1276, 1300
MluNI TGGCCA 1 cut(s) 923
MlyI GAGTC 3 cut(s) 122, 1010, 1229
Mox20I TGGCCA 1 cut(s) 923
Mph1103I ATGCAT 2 cut(s) 325, 1576
MroXI GAANNNNTTC 2 cut(s) 902, 1189
MscI TGGCCA 1 cut(s) 923
MseI TTAA 1 cut(s) 474
Msp20I TGGCCA 1 cut(s) 923
MspA1I CMGCKG 1 cut(s) 506
MspI CCGG 3 cut(s) 654, 951, 1179
MspR9I CCNGG 3 cut(s) 140, 160, 598
Mva1269I GAATGC 2 cut(s) 1021, 1517
MvaI CCWGG 3 cut(s) 140, 160, 598
MvnI CGCG 1 cut(s) 1458
MwoI GCNNNNNNNGC 4 cut(s) 230, 344, 426, 1140
NcoI CCATGG 1 cut(s) 465
NlaIII CATG 9 cut(s) 62, 111, 272, 469, 891, 912, 922, 1102, 1435
NmuCI GTSAC 1 cut(s) 1027
NsiI ATGCAT 2 cut(s) 325, 1576
NspI RCATGY 3 cut(s) 62, 891, 1102
PagI TCATGA 1 cut(s) 268
PciI ACATGT 1 cut(s) 1098
PctI GAATGC 2 cut(s) 1021, 1517
PdmI GAANNNNTTC 2 cut(s) 902, 1189
PfeI GAWTC 3 cut(s) 257, 791, 1185
PfoI TCCNGGA 1 cut(s) 596
PkrI GCNGC 5 cut(s) 146, 422, 425, 428, 1415
PleI GAGTC 3 cut(s) 121, 1009, 1228
PpsI GAGTC 3 cut(s) 121, 1009, 1228
PscI ACATGT 1 cut(s) 1098
PsiI TTATAA 1 cut(s) 488
Psp6I CCWGG 3 cut(s) 138, 158, 596
PspEI GGTNACC 1 cut(s) 1027
PspFI CCCAGC 1 cut(s) 1376
PspGI CCWGG 3 cut(s) 138, 158, 596
PspPI GGNCC 3 cut(s) 394, 1084, 1394
PstI CTGCAG 1 cut(s) 1418
PstNI CAGNNNCTG 1 cut(s) 727
PsuI RGATCY 1 cut(s) 23
RsaI GTAC 4 cut(s) 754, 894, 991, 1420
RsaNI GTAC 4 cut(s) 753, 893, 990, 1419
SaqAI TTAA 1 cut(s) 474
SatI GCNGC 5 cut(s) 145, 421, 424, 427, 1414
Sau96I GGNCC 3 cut(s) 394, 1084, 1394
SchI GAGTC 3 cut(s) 122, 1010, 1229
ScrFI CCNGG 3 cut(s) 140, 160, 598
SduI GDGCHC 1 cut(s) 1509
SfaNI GCATC 2 cut(s) 325, 332
SfcI CTRYAG 4 cut(s) 228, 495, 1309, 1414
SinI GGWCC 2 cut(s) 1084, 1394
SmlI CTYRAG 2 cut(s) 27, 782
SmoI CTYRAG 2 cut(s) 27, 782
Sse9I AATT 9 cut(s) 301, 475, 763, 954, 981, 1156, 1257, 1276, 1300
SsiI CCGC 7 cut(s) 144, 421, 424, 506, 557, 617, 1392
SspMI CTAG 4 cut(s) 612, 768, 1077, 1588
StyD4I CCNGG 3 cut(s) 138, 158, 596
StyI CCWWGG 3 cut(s) 465, 1032, 1562
TaaI ACNGT 2 cut(s) 354, 802
TaiI ACGT 1 cut(s) 346
TaqI TCGA 3 cut(s) 43, 435, 1290
TasI AATT 9 cut(s) 301, 475, 763, 954, 981, 1156, 1257, 1276, 1300
TatI WGTACW 3 cut(s) 752, 892, 1418
TauI GCSGC 3 cut(s) 147, 423, 426
TfiI GAWTC 3 cut(s) 257, 791, 1185
Tru1I TTAA 1 cut(s) 474
Tru9I TTAA 1 cut(s) 474
TscAI CASTG 4 cut(s) 704, 805, 973, 1026
TseFI GTSAC 1 cut(s) 1027
TseI GCWGC 2 cut(s) 426, 1413
Tsp45I GTSAC 1 cut(s) 1027
TspDTI ATGAA 8 cut(s) 54, 257, 378, 639, 656, 825, 1055, 1533
TspGWI ACGGA 1 cut(s) 1225
TspRI CASTG 4 cut(s) 704, 805, 973, 1026
VpaK11BI GGWCC 2 cut(s) 1084, 1394
XapI RAATTY 5 cut(s) 763, 981, 1156, 1257, 1300
XceI RCATGY 3 cut(s) 62, 891, 1102
XmnI GAANNNNTTC 2 cut(s) 902, 1189
XspI CTAG 4 cut(s) 612, 768, 1077, 1588
Zsp2I ATGCAT 2 cut(s) 325, 1576
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.