RCHIOBHM_MTG0498531

Proton-conducting membrane transporter

Basic Information

Type: gene
Biological Identity
rosa_chinensis
Mt
Physical Location & Seq
Forward (+)
93179 .. 93451
273 bp
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UTR
Exon/CDS
Intron
N/A

Sequence Viewer

Length: 171 bp
ATGCGGAACGGGCACGGAGAAAAAAAAGTTGTGGAGGAGAAGCAGCCGAGTTCATTCCCTTCGCTTCCTGGGCCCAAAGCAGTGCAGTCTTTCCTGGCCAAATCAAGGATTTGGGGCTTCTTGCTACGCTACTTAATTATATTATATAAAAAAATCCTTTTTTTGTTTTAG

Protein Analysis

56

Amino Acids

6.51

Weight (kDa)

10.29

Isoelectric Point (pI)

50.85

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0023578)

Species Orthologous Gene IDs
rosa_chinensis RchiOBHm_CPg0501741 RchiOBHm_CPg0502671 RchiOBHm_MTg0498531

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AciI CCGC 1 cut(s) 4
AcoI YGGCCR 1 cut(s) 96
AfiI CCNNNNNNNGG 1 cut(s) 105
AjnI CCWGG 2 cut(s) 67, 93
AoxI GGCC 2 cut(s) 71, 96
ApaI GGGCCC 1 cut(s) 75
ApeKI GCWGC 1 cut(s) 43
AspS9I GGNCC 2 cut(s) 71, 72
BaeGI GKGCMC 2 cut(s) 15, 75
BalI TGGCCA 1 cut(s) 98
BanII GRGCYC 1 cut(s) 75
BbvI GCAGC 1 cut(s) 55
BciT130I CCWGG 2 cut(s) 69, 95
BisI GCNGC 1 cut(s) 44
BlsI GCNGC 1 cut(s) 45
Bme1390I CCNGG 2 cut(s) 69, 95
BmgT120I GGNCC 2 cut(s) 71, 72
BmiI GGNNCC 1 cut(s) 73
BmrFI CCNGG 2 cut(s) 69, 95
BsaJI CCNNGG 1 cut(s) 68
Bsc4I CCNNNNNNNGG 1 cut(s) 105
BseBI CCWGG 2 cut(s) 69, 95
BseDI CCNNGG 1 cut(s) 68
BseLI CCNNNNNNNGG 1 cut(s) 105
BseRI GAGGAG 1 cut(s) 50
BseSI GKGCMC 2 cut(s) 15, 75
BseXI GCAGC 1 cut(s) 55
BsgI GTGCAG 1 cut(s) 104
BshFI GGCC 2 cut(s) 73, 98
BslI CCNNNNNNNGG 1 cut(s) 105
BsnI GGCC 2 cut(s) 73, 98
Bsp120I GGGCCC 1 cut(s) 71
Bsp1286I GDGCHC 2 cut(s) 15, 75
BspACI CCGC 1 cut(s) 4
BspANI GGCC 2 cut(s) 73, 98
BspLI GGNNCC 1 cut(s) 73
BssECI CCNNGG 1 cut(s) 68
Bst2UI CCWGG 2 cut(s) 69, 95
BstMWI GCNNNNNNNGC 2 cut(s) 10, 70
BstNI CCWGG 2 cut(s) 69, 95
BstSCI CCNGG 2 cut(s) 67, 93
BstSLI GKGCMC 2 cut(s) 15, 75
BstV1I GCAGC 1 cut(s) 55
BsuRI GGCC 2 cut(s) 73, 98
BtsI GCAGTG 1 cut(s) 87
BtsIMutI CAGTG 1 cut(s) 87
Cfr13I GGNCC 2 cut(s) 71, 72
CviJI RGCY 4 cut(s) 46, 73, 98, 117
CviKI_1 RGCY 4 cut(s) 46, 73, 98, 117
EaeI YGGCCR 1 cut(s) 96
Eco24I GRGCYC 1 cut(s) 75
EcoRII CCWGG 2 cut(s) 67, 93
EcoT38I GRGCYC 1 cut(s) 75
FaiI YATR 3 cut(s) 140, 145, 147
Fnu4HI GCNGC 1 cut(s) 44
FriOI GRGCYC 1 cut(s) 75
Fsp4HI GCNGC 1 cut(s) 44
GluI GCNGC 1 cut(s) 44
HaeIII GGCC 2 cut(s) 73, 98
HpyAV CCTTC 1 cut(s) 69
HpyCH4V TGCA 1 cut(s) 85
HpyF10VI GCNNNNNNNGC 2 cut(s) 10, 70
LpnPI CCDG 4 cut(s) 54, 80, 81, 107
Lsp1109I GCAGC 1 cut(s) 55
MhlI GDGCHC 2 cut(s) 15, 75
MlsI TGGCCA 1 cut(s) 98
MluCI AATT 1 cut(s) 135
MluNI TGGCCA 1 cut(s) 98
MnlI CCTC 1 cut(s) 28
Mox20I TGGCCA 1 cut(s) 98
MscI TGGCCA 1 cut(s) 98
MseI TTAA 1 cut(s) 134
Msp20I TGGCCA 1 cut(s) 98
MspR9I CCNGG 2 cut(s) 69, 95
MvaI CCWGG 2 cut(s) 69, 95
MwoI GCNNNNNNNGC 2 cut(s) 10, 70
NlaIV GGNNCC 1 cut(s) 73
NmeAIII GCCGAG 1 cut(s) 72
PkrI GCNGC 1 cut(s) 45
Psp6I CCWGG 2 cut(s) 67, 93
PspGI CCWGG 2 cut(s) 67, 93
PspN4I GGNNCC 1 cut(s) 73
PspOMI GGGCCC 1 cut(s) 71
PspPI GGNCC 2 cut(s) 71, 72
SaqAI TTAA 1 cut(s) 134
SatI GCNGC 1 cut(s) 44
Sau96I GGNCC 2 cut(s) 71, 72
ScrFI CCNGG 2 cut(s) 69, 95
SduI GDGCHC 2 cut(s) 15, 75
SgeI CNNG 9 cut(s) 22, 26, 60, 80, 81, 106, 107, 117, 133
Sse9I AATT 1 cut(s) 135
SsiI CCGC 1 cut(s) 4
StyD4I CCNGG 2 cut(s) 67, 93
TasI AATT 1 cut(s) 135
Tru1I TTAA 1 cut(s) 134
Tru9I TTAA 1 cut(s) 134
TscAI CASTG 1 cut(s) 87
TseI GCWGC 1 cut(s) 43
TspDTI ATGAA 1 cut(s) 42
TspGWI ACGGA 1 cut(s) 30
TspRI CASTG 1 cut(s) 87
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.