RCHIOBHM_MTG0498751

DNA-directed 5'-3' RNA polymerase activity

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_chinensis
Mt
OG0030545
Physical Location & Seq
Reverse (-)
150987 .. 153888
2902 bp
Loading structure...
UTR
Exon/CDS
Intron
N/A

Sequence Viewer

Length: 2067 bp
ATGCTTACTTCCTTAACGAAGTTCAAGGGTACAGCCCAGTTTTGGAAAGAAAAACTTTCTGAAACGAAACGACGCTTTTTCACAAGTGAAATGTTTACTTCCTTAAGAATGAAAACCCTCTCATTTATAATGATCCGCAGTCTAACTGTCAACGTACTATTTATTTGGTATCGAACATCACTAGAGAACGTGAAGATTAACGCGGTTTACAGATTCGAAAATCTGGTCAAAATGAAATCATACAAGTTTCAAATGAAAACATTCTTTTCAGAAAATCGAAATTCCCGTTTTAATGATCTTATTCACTGTCCAAATACAATATGTTTTCTTGTATCTCTTTCTATTTTCTTAAACATCAGAGATTTTTCCATTTTATTGACCTTATATGATTATTTAACCTCTGTTAGTGATTTGAATCCATTGTTATCTGTGACAGATTTGGAAACATTGTCATCTAAGACTGAGACTTTCTCATGTATAGTAGGATTTTCTCCGGTTCGATTTAACGGAAAAACCCATTCTAGGTTTATATCACGCCATCTTAAAGGTAATAGAAGTTATTCTAATGGAAAAAAAGAAAATGAATCTATATTGAAGAATTTCTGGGAGAATTTTATAAACAAACTAGACGATAATTATAAAGAATGTAAAAATCAACCGTCAAATGTAGTACGTTATCACGAGAGTGTCTTCGACGTGTTAGATCAGTTTAAATTTGATTATTCAAATAAAGATTTACCTAAGGAAGATTATGAAAAGAAACTGCATTCTTTACAAGAACAATTAGAAGATCTAACAATGCATTTTTATTCAAATAGTCTTTTTAAAAGTTCTAATAAATTGCTCAATTTATTAATTGGTAAAGATGAAATTACAGCTAAGGATTATTTGAAGCAACGGAAGATAGGCCTCTCAGAAGAAGAATTCAAATTTATTAAACCATTAGGTGCATATGATCTAGAAGCACTAATTATTCATGTACTAGCTACACTGTTCAGCAGTCATCATGGTACTGCCCGCGTAAGGGTGGCTAGCTTAATCGAACAGCTTGATTCTTGTGTACGCATGCAAACAATGATGAATGAAAAGCCATCTTACAAGAAGTCTACTAGTAAATCCTATAATATAGGAGTCGGCTTGCTCGAGTTATTGCTTGAAAAATCCTTGATCGCACTAGAAACGTATTCGGATGGTGAATCCGTATCTTTTACTAAAGAAGAAAGTGGAAAGAGAAGGTATTATAATACCAAAAAGTGTTGGGCCTTGTGTAATTTTGATATAAGCCTCTTGCCAATAAGACTAAATCTACCTATGGTTTGTAAACCGCTTGATTGGCATGTAAAAAAGAGAAAAGGACGCACTACAATAAAGTTAAGTGATATGGCTGGAGGATACTTAAGTGGACTACACGGCGACGCCTATAATAGGTTTCGTATATTAACTTCTCATGACATTGATAATTACTATATCCTCGTTGATAATGAAGAAGAGATGTGTTACGCATTAAATACTCTTCAGTCGGTTGCTTTTAAGATAAACAATACAATGTTGAGATTTATTAATAAAAATCGTAATGCATTAGAAGCGGCGGGACTGCTTGCAGATCGACGTCTAGCTAATATTAATATGCTAAAAGCGTCTGAGCTATTGAGACAATGTCACTTCAAAGATGCTGATATACAAAGGATAGCCGGGGTTAACAAATTATTAACTGAATTAAGTAGAATGGTACAACGAGCTAGGTCTGAGGGATTTTTATTACGTATAGCGACGGCGTATTTAGAGTTGACATTTTATCTGCCGGCATTCGTGGACTTTCGTGGTAGAATATACCGCCCTGGTGGGATGCATTTTCATGGATGTGATTTGGCTAAATCTTTAATTGTATTTGCTGATACACCGGAGCGTGTGAAACCTGAACGTGTGAACGCGGCGTTTTTATCACCGGCCGGCAGCTGGGGTAAAAGACAGGAAATAGCAGCTAGTACTGCTTTTAAGTTTCAAAAATTTCCATCAAATATGAAAGCTTTTAACTGGATTATGAACATGTATGATAAATATCTTTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
RNA_pol RPOL_N

Protein Analysis

688

Amino Acids

79.91

Weight (kDa)

9.42

Isoelectric Point (pI)

39.24

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0030545)

Species Orthologous Gene IDs
rosa_chinensis RchiOBHm_MTg0498751
rosa_samantha Rh6DG170000

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 4 cut(s) 128, 617, 639, 1242
AatII GACGTC 1 cut(s) 1612
AccI GTMKAC 1 cut(s) 1106
AccII CGCG 3 cut(s) 203, 1020, 1931
AciI CCGC 8 cut(s) 136, 203, 1018, 1325, 1586, 1589, 1834, 1931
AclWI GGATC 1 cut(s) 127
AcoI YGGCCR 1 cut(s) 1947
AcsI RAATTY 7 cut(s) 280, 598, 610, 713, 923, 929, 2006
AcuI CTGAAG 1 cut(s) 1499
AcyI GRCGYC 2 cut(s) 1416, 1609
AfaI GTAC 8 cut(s) 31, 156, 672, 981, 1012, 1062, 1731, 1987
AfiI CCNNNNNNNGG 6 cut(s) 42, 522, 1023, 1024, 1425, 1956
AflII CTTAAG 2 cut(s) 103, 1396
AflIII ACRYGT 3 cut(s) 696, 1921, 2046
AhlI ACTAGT 1 cut(s) 1109
AjiI CACGTC 1 cut(s) 697
AjnI CCWGG 1 cut(s) 1837
AleI CACNNNNGTG 1 cut(s) 684
Alw26I GTCTC 2 cut(s) 458, 1645
AlwI GGATC 1 cut(s) 127
Ama87I CYCGRG 1 cut(s) 1142
AoxI GGCC 3 cut(s) 907, 1260, 1947
ApeKI GCWGC 2 cut(s) 1953, 1979
ApoI RAATTY 7 cut(s) 280, 598, 610, 713, 923, 929, 2006
ArsI GACNNNNNNTTYG 2 cut(s) 210, 242
AseI ATTAAT 3 cut(s) 854, 1560, 1623
Asp700I GAANNNNTTC 3 cut(s) 260, 559, 599
AspS9I GGNCC 1 cut(s) 1260
AsuC2I CCSGG 1 cut(s) 1693
AsuHPI GGTGA 2 cut(s) 1205, 1935
AsuII TTCGAA 1 cut(s) 216
AsuNHI GCTAGC 1 cut(s) 1031
AvaI CYCGRG 1 cut(s) 1142
AxyI CCTNAGG 1 cut(s) 741
BaeI ACNNNNGTAYC 2 cut(s) 1384, 1417
BarI GAAGNNNNNNTAC 2 cut(s) 1426, 1458
BauI CACGAG 1 cut(s) 680
BbsI GAAGAC 1 cut(s) 682
BbvI GCAGC 2 cut(s) 1965, 1991
BccI CCATC 4 cut(s) 546, 1099, 1184, 2020
BceAI ACGGC 2 cut(s) 1426, 1788
BciT130I CCWGG 1 cut(s) 1839
BciVI GTATCC 1 cut(s) 1385
BcnI CCSGG 1 cut(s) 1693
BcoDI GTCTC 2 cut(s) 458, 1645
BcuI ACTAGT 1 cut(s) 1109
BfrI CTTAAG 2 cut(s) 103, 1396
BfuI GTATCC 1 cut(s) 1385
BglII AGATCT 1 cut(s) 790
BisI GCNGC 4 cut(s) 1587, 1932, 1954, 1980
BlsI GCNGC 4 cut(s) 1588, 1933, 1955, 1981
BmcAI AGTACT 1 cut(s) 1987
Bme1390I CCNGG 2 cut(s) 1693, 1839
BmeT110I CYCGRG 1 cut(s) 1142
BmgBI CACGTC 1 cut(s) 697
BmgT120I GGNCC 1 cut(s) 1260
BmrFI CCNGG 2 cut(s) 1693, 1839
BmrI ACTGGG 1 cut(s) 31
BmsI GCATC 2 cut(s) 1660, 1836
BmtI GCTAGC 1 cut(s) 1035
BmuI ACTGGG 1 cut(s) 31
BpiI GAAGAC 1 cut(s) 682
BplI GAGNNNNNCTC 2 cut(s) 455, 487
BpmI CTGGAG 1 cut(s) 1407
Bpu10I CCTNAGC 1 cut(s) 879
Bpu14I TTCGAA 1 cut(s) 216
BpuMI CCSGG 1 cut(s) 1693
BsaAI YACGTR 1 cut(s) 1763
BsaBI GATNNNNATC 2 cut(s) 414, 2058
BsaHI GRCGYC 2 cut(s) 1416, 1609
BsaJI CCNNGG 2 cut(s) 1692, 1837
BsaWI WCCGGW 2 cut(s) 493, 1900
Bsc4I CCNNNNNNNGG 6 cut(s) 42, 522, 1023, 1024, 1425, 1956
Bse118I RCCGGY 3 cut(s) 1801, 1945, 1949
Bse1I ACTGG 2 cut(s) 37, 2039
Bse21I CCTNAGG 1 cut(s) 741
Bse8I GATNNNNATC 2 cut(s) 414, 2058
BseBI CCWGG 1 cut(s) 1839
BseDI CCNNGG 2 cut(s) 1692, 1837
BseGI GGATG 3 cut(s) 1195, 1851, 1865
BseJI GATNNNNATC 2 cut(s) 414, 2058
BseLI CCNNNNNNNGG 6 cut(s) 42, 522, 1023, 1024, 1425, 1956
BseMII CTCAG 4 cut(s) 453, 927, 1632, 1737
BseNI ACTGG 2 cut(s) 37, 2039
BseX3I CGGCCG 1 cut(s) 1947
BseXI GCAGC 2 cut(s) 1965, 1991
BseYI CCCAGC 1 cut(s) 1956
Bsh1236I CGCG 3 cut(s) 203, 1020, 1931
Bsh1285I CGRYCG 1 cut(s) 1950
BshFI GGCC 3 cut(s) 909, 1262, 1949
BsiEI CGRYCG 1 cut(s) 1950
BsiHKCI CYCGRG 1 cut(s) 1142
BsiSI CCGG 6 cut(s) 494, 1692, 1802, 1901, 1946, 1950
BslFI GGGAC 1 cut(s) 1605
BslI CCNNNNNNNGG 6 cut(s) 42, 522, 1023, 1024, 1425, 1956
BsmAI GTCTC 2 cut(s) 458, 1645
BsmFI GGGAC 1 cut(s) 1605
BsmI GAATGC 2 cut(s) 766, 1805
BsnI GGCC 3 cut(s) 909, 1262, 1949
BsoBI CYCGRG 1 cut(s) 1142
Bsp119I TTCGAA 1 cut(s) 216
Bsp143I GATC 7 cut(s) 132, 295, 703, 790, 955, 1167, 1603
BspACI CCGC 8 cut(s) 136, 203, 1018, 1325, 1586, 1589, 1834, 1931
BspANI GGCC 3 cut(s) 909, 1262, 1949
BspCNI CTCAG 4 cut(s) 454, 926, 1633, 1738
BspFNI CGCG 3 cut(s) 203, 1020, 1931
BspHI TCATGA 1 cut(s) 1447
BspOI GCTAGC 1 cut(s) 1035
BspPI GGATC 1 cut(s) 127
BspT104I TTCGAA 1 cut(s) 216
BspTI CTTAAG 2 cut(s) 103, 1396
BsrFI RCCGGY 3 cut(s) 1801, 1945, 1949
BsrI ACTGG 2 cut(s) 37, 2039
BssAI RCCGGY 3 cut(s) 1801, 1945, 1949
BssECI CCNNGG 2 cut(s) 1692, 1837
BssMI GATC 7 cut(s) 132, 295, 703, 790, 955, 1167, 1603
BssNI GRCGYC 2 cut(s) 1416, 1609
BssSI CACGAG 1 cut(s) 680
Bst2BI CACGAG 1 cut(s) 680
Bst2UI CCWGG 1 cut(s) 1839
Bst4CI ACNGT 4 cut(s) 148, 308, 660, 993
Bst6I CTCTTC 2 cut(s) 1482, 1518
BstACI GRCGYC 2 cut(s) 1416, 1609
BstAFI CTTAAG 2 cut(s) 103, 1396
BstBAI YACGTR 1 cut(s) 1763
BstBI TTCGAA 1 cut(s) 216
BstC8I GCNNGC 7 cut(s) 1018, 1033, 1067, 1139, 1599, 1803, 1951
BstDEI CTNAG 7 cut(s) 456, 462, 741, 879, 913, 1641, 1746
BstENI CCTNNNNNAGG 1 cut(s) 1423
BstF5I GGATG 3 cut(s) 1195, 1851, 1865
BstFNI CGCG 3 cut(s) 203, 1020, 1931
BstKTI GATC 7 cut(s) 135, 298, 706, 793, 958, 1170, 1606
BstMAI GTCTC 2 cut(s) 458, 1645
BstMBI GATC 7 cut(s) 132, 295, 703, 790, 955, 1167, 1603
BstMCI CGRYCG 1 cut(s) 1950
BstMWI GCNNNNNNNGC 3 cut(s) 1333, 1583, 1988
BstNI CCWGG 1 cut(s) 1839
BstNSI RCATGY 3 cut(s) 1069, 1340, 2050
BstSCI CCNGG 2 cut(s) 1691, 1837
BstSNI TACGTA 1 cut(s) 1763
BstUI CGCG 3 cut(s) 203, 1020, 1931
BstV1I GCAGC 2 cut(s) 1965, 1991
BstV2I GAAGAC 1 cut(s) 682
BstX2I RGATCY 1 cut(s) 790
BstYI RGATCY 1 cut(s) 790
BstZI CGGCCG 1 cut(s) 1947
Bsu36I CCTNAGG 1 cut(s) 741
BsuI GTATCC 1 cut(s) 1385
BsuRI GGCC 3 cut(s) 909, 1262, 1949
BtrI CACGTC 1 cut(s) 697
BtsCI GGATG 3 cut(s) 1195, 1851, 1865
BtsIMutI CAGTG 2 cut(s) 304, 989
Cac8I GCNNGC 7 cut(s) 1018, 1033, 1067, 1139, 1599, 1803, 1951
CciI TCATGA 1 cut(s) 1447
Cfr10I RCCGGY 3 cut(s) 1801, 1945, 1949
Cfr13I GGNCC 1 cut(s) 1260
CseI GACGC 4 cut(s) 81, 1365, 1424, 1626
Csp6I GTAC 8 cut(s) 30, 155, 671, 980, 1011, 1061, 1730, 1986
CviAII CATG 8 cut(s) 474, 977, 1007, 1066, 1337, 1448, 1856, 2047
CviQI GTAC 8 cut(s) 30, 155, 671, 980, 1011, 1061, 1730, 1986
DdeI CTNAG 7 cut(s) 456, 462, 741, 879, 913, 1641, 1746
DpnI GATC 7 cut(s) 134, 297, 705, 792, 957, 1169, 1605
DpnII GATC 7 cut(s) 132, 295, 703, 790, 955, 1167, 1603
DraI TTTAAA 2 cut(s) 712, 826
EaeI YGGCCR 1 cut(s) 1947
EagI CGGCCG 1 cut(s) 1947
Eam1104I CTCTTC 2 cut(s) 1482, 1518
EarI CTCTTC 2 cut(s) 1482, 1518
EclXI CGGCCG 1 cut(s) 1947
Eco105I TACGTA 1 cut(s) 1763
Eco147I AGGCCT 1 cut(s) 909
Eco52I CGGCCG 1 cut(s) 1947
Eco57I CTGAAG 1 cut(s) 1499
Eco81I CCTNAGG 1 cut(s) 741
Eco88I CYCGRG 1 cut(s) 1142
EcoNI CCTNNNNNAGG 1 cut(s) 1423
EcoRI GAATTC 1 cut(s) 923
EcoRII CCWGG 1 cut(s) 1837
EcoT22I ATGCAT 3 cut(s) 804, 1579, 1851
FaeI CATG 8 cut(s) 477, 980, 1010, 1069, 1340, 1451, 1859, 2050
FalI AAGNNNNNCTT 2 cut(s) 39, 71
FaqI GGGAC 1 cut(s) 1605
FatI CATG 8 cut(s) 473, 976, 1006, 1065, 1336, 1447, 1855, 2046
FauI CCCGC 2 cut(s) 1025, 1582
FauNDI CATATG 1 cut(s) 952
FblI GTMKAC 1 cut(s) 1106
Fnu4HI GCNGC 4 cut(s) 1587, 1932, 1954, 1980
FokI GGATG 3 cut(s) 1202, 1858, 1872
Fsp4HI GCNGC 4 cut(s) 1587, 1932, 1954, 1980
GluI GCNGC 4 cut(s) 1587, 1932, 1954, 1980
GsaI CCCAGC 1 cut(s) 1960
GsuI CTGGAG 1 cut(s) 1407
HaeIII GGCC 3 cut(s) 909, 1262, 1949
HapII CCGG 6 cut(s) 494, 1692, 1802, 1901, 1946, 1950
HgaI GACGC 4 cut(s) 81, 1365, 1424, 1626
Hin1I GRCGYC 2 cut(s) 1416, 1609
Hin1II CATG 8 cut(s) 477, 980, 1010, 1069, 1340, 1451, 1859, 2050
HincII GTYRAC 3 cut(s) 151, 1699, 1788
HindII GTYRAC 3 cut(s) 151, 1699, 1788
HindIII AAGCTT 1 cut(s) 2025
HinfI GANTC 6 cut(s) 213, 415, 584, 1052, 1131, 1196
HpaI GTTAAC 1 cut(s) 1699
HpaII CCGG 6 cut(s) 494, 1692, 1802, 1901, 1946, 1950
HphI GGTGA 2 cut(s) 1205, 1935
Hpy188I TCNGA 7 cut(s) 61, 271, 359, 916, 1189, 1642, 1747
Hpy188III TCNNGA 3 cut(s) 680, 959, 1448
Hpy99I CGWCG 5 cut(s) 75, 698, 1418, 1611, 1774
HpyAV CCTTC 1 cut(s) 1227
HpyCH4III ACNGT 4 cut(s) 148, 308, 660, 993
HpyCH4IV ACGT 8 cut(s) 153, 189, 673, 696, 1181, 1609, 1762, 1921
HpyCH4V TGCA 7 cut(s) 766, 802, 950, 1069, 1577, 1601, 1849
HpyF10VI GCNNNNNNNGC 3 cut(s) 1333, 1583, 1988
HpyF3I CTNAG 7 cut(s) 456, 462, 741, 879, 913, 1641, 1746
HpySE526I ACGT 8 cut(s) 153, 189, 673, 696, 1181, 1609, 1762, 1921
Hsp92I GRCGYC 2 cut(s) 1416, 1609
Hsp92II CATG 8 cut(s) 477, 980, 1010, 1069, 1340, 1451, 1859, 2050
KroI GCCGGC 2 cut(s) 1801, 1949
KroNI GCCGGC 2 cut(s) 1803, 1951
KspAI GTTAAC 1 cut(s) 1699
Kzo9I GATC 7 cut(s) 132, 295, 703, 790, 955, 1167, 1603
LmnI GCTCC 1 cut(s) 1903
Lsp1109I GCAGC 2 cut(s) 1965, 1991
LweI GCATC 2 cut(s) 1660, 1836
MaeII ACGT 8 cut(s) 153, 189, 673, 696, 1181, 1609, 1762, 1921
MaeIII GTNAC 3 cut(s) 430, 1496, 1658
MalI GATC 7 cut(s) 134, 297, 705, 792, 957, 1169, 1605
MboI GATC 7 cut(s) 132, 295, 703, 790, 955, 1167, 1603
MflI RGATCY 1 cut(s) 790
MlyI GAGTC 1 cut(s) 1140
MnlI CCTC 7 cut(s) 128, 409, 920, 1295, 1382, 1481, 1741
Mph1103I ATGCAT 3 cut(s) 804, 1579, 1851
MroNI GCCGGC 2 cut(s) 1801, 1949
MroXI GAANNNNTTC 3 cut(s) 260, 559, 599
MslI CAYNNNNRTG 3 cut(s) 684, 1854, 1860
MspA1I CMGCKG 1 cut(s) 1956
MspCI CTTAAG 2 cut(s) 103, 1396
MspI CCGG 6 cut(s) 494, 1692, 1802, 1901, 1946, 1950
MspR9I CCNGG 2 cut(s) 1693, 1839
Mva1269I GAATGC 2 cut(s) 766, 1805
MvaI CCWGG 1 cut(s) 1839
MvnI CGCG 3 cut(s) 203, 1020, 1931
MwoI GCNNNNNNNGC 3 cut(s) 1333, 1583, 1988
NaeI GCCGGC 2 cut(s) 1803, 1951
NciI CCSGG 1 cut(s) 1693
NdeI CATATG 1 cut(s) 952
NdeII GATC 7 cut(s) 132, 295, 703, 790, 955, 1167, 1603
NgoMIV GCCGGC 2 cut(s) 1801, 1949
NheI GCTAGC 1 cut(s) 1031
NlaIII CATG 8 cut(s) 477, 980, 1010, 1069, 1340, 1451, 1859, 2050
NmuCI GTSAC 2 cut(s) 430, 1658
NsiI ATGCAT 3 cut(s) 804, 1579, 1851
NspI RCATGY 3 cut(s) 1069, 1340, 2050
NspV TTCGAA 1 cut(s) 216
OliI CACNNNNGTG 1 cut(s) 684
PaeI GCATGC 1 cut(s) 1069
PaeR7I CTCGAG 1 cut(s) 1142
PagI TCATGA 1 cut(s) 1447
PceI AGGCCT 1 cut(s) 909
PciI ACATGT 1 cut(s) 2046
PcsI WCGNNNNNNNCGW 2 cut(s) 283, 1140
PctI GAATGC 2 cut(s) 766, 1805
PdiI GCCGGC 2 cut(s) 1803, 1951
PdmI GAANNNNTTC 3 cut(s) 260, 559, 599
PfeI GAWTC 5 cut(s) 213, 415, 584, 1052, 1196
PflFI GACNNNGTC 1 cut(s) 1656
PkrI GCNGC 4 cut(s) 1588, 1933, 1955, 1981
PleI GAGTC 1 cut(s) 1139
PpsI GAGTC 1 cut(s) 1139
Ppu21I YACGTR 1 cut(s) 1763
PscI ACATGT 1 cut(s) 2046
PshBI ATTAAT 3 cut(s) 854, 1560, 1623
PsiI TTATAA 4 cut(s) 128, 617, 639, 1242
Psp6I CCWGG 1 cut(s) 1837
PspFI CCCAGC 1 cut(s) 1956
PspGI CCWGG 1 cut(s) 1837
PspPI GGNCC 1 cut(s) 1260
PspXI VCTCGAGB 1 cut(s) 1142
PsuI RGATCY 1 cut(s) 790
PsyI GACNNNGTC 1 cut(s) 1656
PvuII CAGCTG 1 cut(s) 1956
RsaI GTAC 8 cut(s) 31, 156, 672, 981, 1012, 1062, 1731, 1987
RsaNI GTAC 8 cut(s) 30, 155, 671, 980, 1011, 1061, 1730, 1986
RseI CAYNNNNRTG 3 cut(s) 684, 1854, 1860
SatI GCNGC 4 cut(s) 1587, 1932, 1954, 1980
Sau3AI GATC 7 cut(s) 132, 295, 703, 790, 955, 1167, 1603
Sau96I GGNCC 1 cut(s) 1260
ScaI AGTACT 1 cut(s) 1987
SchI GAGTC 1 cut(s) 1140
ScrFI CCNGG 2 cut(s) 1693, 1839
SfaNI GCATC 2 cut(s) 1660, 1836
Sfr274I CTCGAG 1 cut(s) 1142
SfuI TTCGAA 1 cut(s) 216
SlaI CTCGAG 1 cut(s) 1142
SmiMI CAYNNNNRTG 3 cut(s) 684, 1854, 1860
SmlI CTYRAG 3 cut(s) 103, 1142, 1396
SmoI CTYRAG 3 cut(s) 103, 1142, 1396
SnaBI TACGTA 1 cut(s) 1763
SpeI ACTAGT 1 cut(s) 1109
SphI GCATGC 1 cut(s) 1069
SseBI AGGCCT 1 cut(s) 909
SsiI CCGC 8 cut(s) 136, 203, 1018, 1325, 1586, 1589, 1834, 1931
SspI AATATT 1 cut(s) 1621
StuI AGGCCT 1 cut(s) 909
StyD4I CCNGG 2 cut(s) 1691, 1837
TaaI ACNGT 4 cut(s) 148, 308, 660, 993
TaiI ACGT 8 cut(s) 156, 192, 676, 699, 1184, 1612, 1765, 1924
TaqI TCGA 8 cut(s) 172, 216, 277, 499, 693, 1041, 1143, 1606
TatI WGTACW 2 cut(s) 979, 1985
TauI GCSGC 2 cut(s) 1589, 1934
TfiI GAWTC 5 cut(s) 213, 415, 584, 1052, 1196
TscAI CASTG 2 cut(s) 311, 996
TseFI GTSAC 2 cut(s) 430, 1658
TseI GCWGC 2 cut(s) 1953, 1979
Tsp45I GTSAC 2 cut(s) 430, 1658
TspGWI ACGGA 3 cut(s) 522, 913, 1189
TspRI CASTG 2 cut(s) 311, 996
Tth111I GACNNNGTC 1 cut(s) 1656
Vha464I CTTAAG 2 cut(s) 103, 1396
VspI ATTAAT 3 cut(s) 854, 1560, 1623
XagI CCTNNNNNAGG 1 cut(s) 1423
XapI RAATTY 7 cut(s) 280, 598, 610, 713, 923, 929, 2006
XbaI TCTAGA 1 cut(s) 958
XceI RCATGY 3 cut(s) 1069, 1340, 2050
XhoI CTCGAG 1 cut(s) 1142
XmiI GTMKAC 1 cut(s) 1106
XmnI GAANNNNTTC 3 cut(s) 260, 559, 599
ZraI GACGTC 1 cut(s) 1610
ZrmI AGTACT 1 cut(s) 1987
Zsp2I ATGCAT 3 cut(s) 804, 1579, 1851
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.