RCHIOBHM_CPG0502811

NAD(P)H-quinone oxidoreductase chain

Basic Information

Type: gene
Biological Identity
rosa_chinensis
Pt
N/A
Physical Location & Seq
Forward (+)
151746 .. 152777
1032 bp
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UTR
Exon/CDS
Intron
N/A

Sequence Viewer

Length: 267 bp
ATGACAAAAGTATTAATTACTTTTGTAATGGCAATTGGAATGATATTAACTCCTATTTATTCATTATCTATGTTACGCCAGATGTTCTATGGATACAAGCTTTTTAATGCCCCAAACTCTTATTTTTTTGATTCTGGACCGCGAGAGTTATTTATTTCTATTTCTATCCTTTTACCTGTAATAGGTATTGGTATTTATCCCGATTTCGTTTTCTCATTATCAGTTGACAAGGTCGAAGCTATTATATCAAATTTTTTTTATAGATAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
Pfam Domains
Protein Families

Protein Analysis

88

Amino Acids

10.09

Weight (kDa)

8.01

Isoelectric Point (pI)

24.46

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes

No orthologs found for this gene in the current database.

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccII CGCG 1 cut(s) 142
AciI CCGC 1 cut(s) 140
AcsI RAATTY 1 cut(s) 250
AfiI CCNNNNNNNGG 1 cut(s) 182
AluBI AGCT 2 cut(s) 100, 239
AluI AGCT 2 cut(s) 100, 239
ApoI RAATTY 1 cut(s) 250
AseI ATTAAT 1 cut(s) 14
AspS9I GGNCC 1 cut(s) 137
AvaII GGWCC 1 cut(s) 137
BciVI GTATCC 1 cut(s) 86
BfuI GTATCC 1 cut(s) 86
Bme18I GGWCC 1 cut(s) 137
BmgT120I GGNCC 1 cut(s) 137
Bsc4I CCNNNNNNNGG 1 cut(s) 182
BseLI CCNNNNNNNGG 1 cut(s) 182
Bsh1236I CGCG 1 cut(s) 142
BslI CCNNNNNNNGG 1 cut(s) 182
BspACI CCGC 1 cut(s) 140
BspFNI CGCG 1 cut(s) 142
BstENI CCTNNNNNAGG 1 cut(s) 180
BstFNI CGCG 1 cut(s) 142
BstUI CGCG 1 cut(s) 142
BsuI GTATCC 1 cut(s) 86
Cfr13I GGNCC 1 cut(s) 137
CviJI RGCY 2 cut(s) 100, 239
CviKI_1 RGCY 2 cut(s) 100, 239
Eco47I GGWCC 1 cut(s) 137
EcoNI CCTNNNNNAGG 1 cut(s) 180
FaiI YATR 4 cut(s) 71, 90, 245, 261
HincII GTYRAC 1 cut(s) 226
HindII GTYRAC 1 cut(s) 226
HindIII AAGCTT 1 cut(s) 98
HinfI GANTC 1 cut(s) 131
Hpy166II GTNNAC 1 cut(s) 226
Hpy188III TCNNGA 2 cut(s) 135, 200
Hpy8I GTNNAC 1 cut(s) 226
LpnPI CCDG 3 cut(s) 92, 120, 189
MaeIII GTNAC 1 cut(s) 72
MfeI CAATTG 1 cut(s) 33
MluCI AATT 3 cut(s) 15, 33, 250
MseI TTAA 3 cut(s) 14, 47, 105
MunI CAATTG 1 cut(s) 33
MvnI CGCG 1 cut(s) 142
PfeI GAWTC 1 cut(s) 131
PflFI GACNNNGTC 1 cut(s) 230
PshBI ATTAAT 1 cut(s) 14
PspPI GGNCC 1 cut(s) 137
PsyI GACNNNGTC 1 cut(s) 230
SaqAI TTAA 3 cut(s) 14, 47, 105
Sau96I GGNCC 1 cut(s) 137
SetI ASST 5 cut(s) 102, 178, 187, 234, 241
SgeI CNNG 8 cut(s) 91, 109, 147, 153, 155, 188, 212, 241
SinI GGWCC 1 cut(s) 137
Sse9I AATT 3 cut(s) 15, 33, 250
SsiI CCGC 1 cut(s) 140
TaqI TCGA 1 cut(s) 234
TasI AATT 3 cut(s) 15, 33, 250
TfiI GAWTC 1 cut(s) 131
Tru1I TTAA 3 cut(s) 14, 47, 105
Tru9I TTAA 3 cut(s) 14, 47, 105
TspDTI ATGAA 1 cut(s) 51
Tth111I GACNNNGTC 1 cut(s) 230
VpaK11BI GGWCC 1 cut(s) 137
VspI ATTAAT 1 cut(s) 14
XagI CCTNNNNNAGG 1 cut(s) 180
XapI RAATTY 1 cut(s) 250
XcmI CCANNNNNNNNNTGG 1 cut(s) 86
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.