RchiOBHm_Chr7g0181921

ADP-ribosylation factor GTPase-activating protein

Basic Information

Type: gene
Biological Identity
rosa_chinensis
7
N/A
Physical Location & Seq
Reverse (-)
3388853 .. 3389119
267 bp
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UTR
Exon/CDS
Intron
N/A

Sequence Viewer

Length: 180 bp
ATGCTGCAAAAAGATAATCGCGCTTGTGCTGATTGTGGTGCTGCAGATCCTAAATGGGCAGATGCTTGTTTGATTTTATTTAAGATTAAGAGTTTAAAGATGAGTAGTTTTGCAAAGCTATTGACTGGCTTCCCATACATTTTCCAGAAATTTGATATTAGACAAATTACTCTGATATAA

Protein Analysis

59

Amino Acids

6.7

Weight (kDa)

9.22

Isoelectric Point (pI)

43.59

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Orthologous Genes

No orthologs found for this gene in the current database.

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccII CGCG 1 cut(s) 21
AclWI GGATC 1 cut(s) 41
AcsI RAATTY 1 cut(s) 149
AluBI AGCT 1 cut(s) 118
AluI AGCT 1 cut(s) 118
AlwI GGATC 1 cut(s) 41
ApeKI GCWGC 2 cut(s) 4, 41
ApoI RAATTY 1 cut(s) 149
AspLEI GCGC 1 cut(s) 23
BbvI GCAGC 1 cut(s) 28
BfmI CTRYAG 1 cut(s) 42
BisI GCNGC 2 cut(s) 5, 42
BlsI GCNGC 2 cut(s) 6, 43
BmsI GCATC 1 cut(s) 52
Bse1I ACTGG 1 cut(s) 130
BseNI ACTGG 1 cut(s) 130
BseXI GCAGC 1 cut(s) 28
Bsh1236I CGCG 1 cut(s) 21
Bsp143I GATC 1 cut(s) 46
BspFNI CGCG 1 cut(s) 21
BspMAI CTGCAG 1 cut(s) 46
BspPI GGATC 1 cut(s) 41
BsrI ACTGG 1 cut(s) 130
BssMI GATC 1 cut(s) 46
BstFNI CGCG 1 cut(s) 21
BstHHI GCGC 1 cut(s) 23
BstKTI GATC 1 cut(s) 49
BstMBI GATC 1 cut(s) 46
BstSFI CTRYAG 1 cut(s) 42
BstUI CGCG 1 cut(s) 21
BstV1I GCAGC 1 cut(s) 28
BstX2I RGATCY 1 cut(s) 46
BstYI RGATCY 1 cut(s) 46
CfoI GCGC 1 cut(s) 23
CviJI RGCY 2 cut(s) 118, 129
CviKI_1 RGCY 2 cut(s) 118, 129
DpnI GATC 1 cut(s) 48
DpnII GATC 1 cut(s) 46
DraI TTTAAA 1 cut(s) 96
FaiI YATR 2 cut(s) 136, 178
Fnu4HI GCNGC 2 cut(s) 5, 42
Fsp4HI GCNGC 2 cut(s) 5, 42
FspEI CC 8 cut(s) 21, 40, 41, 63, 111, 146, 147, 158
GlaI GCGC 1 cut(s) 22
GluI GCNGC 2 cut(s) 5, 42
HhaI GCGC 1 cut(s) 23
Hin6I GCGC 1 cut(s) 21
HinP1I GCGC 1 cut(s) 21
Hpy188I TCNGA 1 cut(s) 174
Hpy188III TCNNGA 1 cut(s) 145
HpyCH4V TGCA 3 cut(s) 7, 44, 113
HspAI GCGC 1 cut(s) 21
Kzo9I GATC 1 cut(s) 46
LpnPI CCDG 2 cut(s) 111, 158
Lsp1109I GCAGC 1 cut(s) 28
LweI GCATC 1 cut(s) 52
MalI GATC 1 cut(s) 48
MboI GATC 1 cut(s) 46
MflI RGATCY 1 cut(s) 46
MluCI AATT 2 cut(s) 149, 165
MseI TTAA 3 cut(s) 81, 87, 95
MvnI CGCG 1 cut(s) 21
NdeII GATC 1 cut(s) 46
PkrI GCNGC 2 cut(s) 6, 43
PstI CTGCAG 1 cut(s) 46
PsuI RGATCY 1 cut(s) 46
SaqAI TTAA 3 cut(s) 81, 87, 95
SatI GCNGC 2 cut(s) 5, 42
Sau3AI GATC 1 cut(s) 46
SetI ASST 1 cut(s) 120
SfaNI GCATC 1 cut(s) 52
SfcI CTRYAG 1 cut(s) 42
SgeI CNNG 5 cut(s) 32, 36, 78, 138, 157
Sse9I AATT 2 cut(s) 149, 165
TasI AATT 2 cut(s) 149, 165
Tru1I TTAA 3 cut(s) 81, 87, 95
Tru9I TTAA 3 cut(s) 81, 87, 95
TseI GCWGC 2 cut(s) 4, 41
XapI RAATTY 1 cut(s) 149
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.