RchiOBHm_Chr7g0187191

Belongs to the adenylate kinase family

Basic Information

Type: gene
Biological Identity
rosa_chinensis
7
N/A
Physical Location & Seq
Reverse (-)
6954018 .. 6954347
330 bp
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UTR
Exon/CDS
Intron
N/A

Sequence Viewer

Length: 165 bp
ATGGATGTTTATCGAATAGGCACCTTAATGGAACTTGTTCGAACTCTAGCTCTTTCATTTGCTGATGATGGGAAATCTGTCAAGTCTCTAAGGGGGAAGGTGCCCTTGCTGGAATACCATTGCAGCTTGCTGGGACTCGACATGCCCCTTGTTATTTTCTTATGA

Protein Analysis

54

Amino Acids

6.04

Weight (kDa)

6.52

Isoelectric Point (pI)

12.88

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Orthologous Genes

No orthologs found for this gene in the current database.

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB1I GGYRCC 2 cut(s) 20, 100
AluBI AGCT 2 cut(s) 50, 126
AluI AGCT 2 cut(s) 50, 126
Alw26I GTCTC 1 cut(s) 90
ApeKI GCWGC 1 cut(s) 123
Asp700I GAANNNNTTC 1 cut(s) 36
AsuII TTCGAA 1 cut(s) 40
BaeGI GKGCMC 1 cut(s) 105
BanI GGYRCC 2 cut(s) 20, 100
BbvI GCAGC 1 cut(s) 135
BccI CCATC 1 cut(s) 62
BcoDI GTCTC 1 cut(s) 90
BfaI CTAG 1 cut(s) 47
BisI GCNGC 1 cut(s) 124
BlsI GCNGC 1 cut(s) 125
BmiI GGNNCC 2 cut(s) 22, 102
Bpu14I TTCGAA 1 cut(s) 40
BsaBI GATNNNNATC 1 cut(s) 9
Bse3DI GCAATG 1 cut(s) 118
Bse8I GATNNNNATC 1 cut(s) 9
BseGI GGATG 1 cut(s) 10
BseJI GATNNNNATC 1 cut(s) 9
BseMI GCAATG 1 cut(s) 118
BseSI GKGCMC 1 cut(s) 105
BseXI GCAGC 1 cut(s) 135
BseYI CCCAGC 1 cut(s) 130
BshNI GGYRCC 2 cut(s) 20, 100
BslFI GGGAC 1 cut(s) 147
BsmAI GTCTC 1 cut(s) 90
BsmFI GGGAC 1 cut(s) 147
Bsp119I TTCGAA 1 cut(s) 40
Bsp1286I GDGCHC 1 cut(s) 105
BspLI GGNNCC 2 cut(s) 22, 102
BspT104I TTCGAA 1 cut(s) 40
BspT107I GGYRCC 2 cut(s) 20, 100
BsrDI GCAATG 1 cut(s) 118
BstBI TTCGAA 1 cut(s) 40
BstC8I GCNNGC 1 cut(s) 128
BstDEI CTNAG 1 cut(s) 89
BstF5I GGATG 1 cut(s) 10
BstMAI GTCTC 1 cut(s) 90
BstNSI RCATGY 1 cut(s) 145
BstSLI GKGCMC 1 cut(s) 105
BstV1I GCAGC 1 cut(s) 135
BtsCI GGATG 1 cut(s) 10
Cac8I GCNNGC 1 cut(s) 128
CviAII CATG 1 cut(s) 142
CviJI RGCY 2 cut(s) 50, 126
CviKI_1 RGCY 2 cut(s) 50, 126
DdeI CTNAG 1 cut(s) 89
FaeI CATG 1 cut(s) 145
FaiI YATR 2 cut(s) 143, 163
FalI AAGNNNNNCTT 2 cut(s) 89, 121
FaqI GGGAC 1 cut(s) 147
FatI CATG 1 cut(s) 141
Fnu4HI GCNGC 1 cut(s) 124
FokI GGATG 1 cut(s) 17
Fsp4HI GCNGC 1 cut(s) 124
FspBI CTAG 1 cut(s) 47
GluI GCNGC 1 cut(s) 124
GsaI CCCAGC 1 cut(s) 134
Hin1II CATG 1 cut(s) 145
HinfI GANTC 1 cut(s) 135
HpyAV CCTTC 1 cut(s) 91
HpyCH4V TGCA 1 cut(s) 123
HpyF3I CTNAG 1 cut(s) 89
Hsp92II CATG 1 cut(s) 145
LpnPI CCDG 2 cut(s) 95, 116
Lsp1109I GCAGC 1 cut(s) 135
MaeI CTAG 1 cut(s) 47
MhlI GDGCHC 1 cut(s) 105
MlyI GAGTC 1 cut(s) 129
MroXI GAANNNNTTC 1 cut(s) 36
MseI TTAA 1 cut(s) 26
MslI CAYNNNNRTG 1 cut(s) 26
NlaIII CATG 1 cut(s) 145
NlaIV GGNNCC 2 cut(s) 22, 102
NspI RCATGY 1 cut(s) 145
NspV TTCGAA 1 cut(s) 40
PdmI GAANNNNTTC 1 cut(s) 36
PkrI GCNGC 1 cut(s) 125
PleI GAGTC 1 cut(s) 129
PpsI GAGTC 1 cut(s) 129
PspFI CCCAGC 1 cut(s) 130
PspN4I GGNNCC 2 cut(s) 22, 102
RseI CAYNNNNRTG 1 cut(s) 26
SaqAI TTAA 1 cut(s) 26
SatI GCNGC 1 cut(s) 124
SchI GAGTC 1 cut(s) 129
SduI GDGCHC 1 cut(s) 105
SetI ASST 4 cut(s) 26, 52, 102, 128
SfuI TTCGAA 1 cut(s) 40
SmiMI CAYNNNNRTG 1 cut(s) 26
SspMI CTAG 1 cut(s) 47
TaqI TCGA 3 cut(s) 13, 40, 138
Tru1I TTAA 1 cut(s) 26
Tru9I TTAA 1 cut(s) 26
TseI GCWGC 1 cut(s) 123
TspDTI ATGAA 1 cut(s) 45
XceI RCATGY 1 cut(s) 145
XmnI GAANNNNTTC 1 cut(s) 36
XspI CTAG 1 cut(s) 47
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.