RchiOBHm_Chr7g0194281

Belongs to the peroxidase family. Classical plant (class III) peroxidase subfamily

Basic Information

Type: gene
Biological Identity
rosa_chinensis
7
N/A
Physical Location & Seq
Forward (+)
12403141 .. 12403649
509 bp
Loading structure...
UTR
Exon/CDS
Intron
N/A

Sequence Viewer

Length: 183 bp
ATGAACCATCTTCCAAATGATGCCAGTTTGAGGAACAATTGCCCAAGATCTGGTGGAGACCAAAACCTGTTCTTCTTGGACTTTGTGAGCCCAACAAAGTTTGACAACAGCTACTTCAAAACTTATTGGCTAACAAGGGCCTGCTTAACTCTGACCAAGTTCTTGTTACAAAGAGTGAAGTAG

Protein Analysis

60

Amino Acids

7.05

Weight (kDa)

9.51

Isoelectric Point (pI)

50.6

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

Orthologous Genes

No orthologs found for this gene in the current database.

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB7I CCANNNNNTGG 1 cut(s) 50
AfiI CCNNNNNNNGG 2 cut(s) 30, 50
AgsI TTSAA 1 cut(s) 118
AluBI AGCT 1 cut(s) 111
AluI AGCT 1 cut(s) 111
Alw26I GTCTC 1 cut(s) 51
AoxI GGCC 1 cut(s) 138
AspS9I GGNCC 1 cut(s) 138
BanII GRGCYC 1 cut(s) 92
BccI CCATC 1 cut(s) 15
BcoDI GTCTC 1 cut(s) 51
BglII AGATCT 1 cut(s) 47
BmgT120I GGNCC 1 cut(s) 138
BmsI GCATC 1 cut(s) 10
BsaI GGTCTC 1 cut(s) 51
Bsc4I CCNNNNNNNGG 2 cut(s) 30, 50
Bse1I ACTGG 1 cut(s) 24
BseLI CCNNNNNNNGG 2 cut(s) 30, 50
BseNI ACTGG 1 cut(s) 24
BshFI GGCC 1 cut(s) 140
BslI CCNNNNNNNGG 2 cut(s) 30, 50
BsmAI GTCTC 1 cut(s) 51
BsnI GGCC 1 cut(s) 140
Bso31I GGTCTC 1 cut(s) 51
Bsp1286I GDGCHC 1 cut(s) 92
Bsp143I GATC 1 cut(s) 47
BspANI GGCC 1 cut(s) 140
BspTNI GGTCTC 1 cut(s) 51
BsrI ACTGG 1 cut(s) 24
BssMI GATC 1 cut(s) 47
BstC8I GCNNGC 1 cut(s) 142
BstKTI GATC 1 cut(s) 50
BstMAI GTCTC 1 cut(s) 51
BstMBI GATC 1 cut(s) 47
BstX2I RGATCY 1 cut(s) 47
BstYI RGATCY 1 cut(s) 47
BsuRI GGCC 1 cut(s) 140
Cac8I GCNNGC 1 cut(s) 142
Cfr13I GGNCC 1 cut(s) 138
CviJI RGCY 4 cut(s) 90, 111, 130, 140
CviKI_1 RGCY 4 cut(s) 90, 111, 130, 140
DpnI GATC 1 cut(s) 49
DpnII GATC 1 cut(s) 47
Eco24I GRGCYC 1 cut(s) 92
Eco31I GGTCTC 1 cut(s) 51
EcoO109I RGGNCCY 1 cut(s) 138
EcoT38I GRGCYC 1 cut(s) 92
FriOI GRGCYC 1 cut(s) 92
HaeIII GGCC 1 cut(s) 140
Hpy188I TCNGA 1 cut(s) 153
Kzo9I GATC 1 cut(s) 47
LpnPI CCDG 4 cut(s) 36, 37, 80, 154
LweI GCATC 1 cut(s) 10
MaeIII GTNAC 1 cut(s) 165
MalI GATC 1 cut(s) 49
MboI GATC 1 cut(s) 47
MboII GAAGA 1 cut(s) 64
MfeI CAATTG 1 cut(s) 37
MflI RGATCY 1 cut(s) 47
MhlI GDGCHC 1 cut(s) 92
MluCI AATT 1 cut(s) 37
MnlI CCTC 1 cut(s) 24
MseI TTAA 1 cut(s) 146
MunI CAATTG 1 cut(s) 37
NdeII GATC 1 cut(s) 47
PflMI CCANNNNNTGG 1 cut(s) 50
PspPI GGNCC 1 cut(s) 138
PsuI RGATCY 1 cut(s) 47
SaqAI TTAA 1 cut(s) 146
Sau3AI GATC 1 cut(s) 47
Sau96I GGNCC 1 cut(s) 138
SduI GDGCHC 1 cut(s) 92
SetI ASST 2 cut(s) 69, 113
SfaNI GCATC 1 cut(s) 10
SgeI CNNG 9 cut(s) 36, 57, 63, 79, 88, 147, 153, 169, 175
Sse9I AATT 1 cut(s) 37
TasI AATT 1 cut(s) 37
Tru1I TTAA 1 cut(s) 146
Tru9I TTAA 1 cut(s) 146
TspDTI ATGAA 1 cut(s) 17
Van91I CCANNNNNTGG 1 cut(s) 50
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.