RchiOBHm_Chr7g0198931

11S globulin seed storage protein

Basic Information

Type: gene
Biological Identity
rosa_chinensis
7
N/A
Physical Location & Seq
Forward (+)
16918029 .. 16918707
679 bp
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UTR
Exon/CDS
Intron
N/A

Sequence Viewer

Length: 186 bp
ATGGTGGCGAAACTTGCTGGAGAAAAAGGAATGGAGTGTTTCTCTGTCATTACAAGTTCCCAGGCTGTCCTGGAAGACTTAACTGATAAGACATCAGTATTAAGGGCATTATCACCTGAGGTGTTACAAATATCCCTCAATATAAACCCACAGTTGCAGACTCTTCTCCAATCAAATATTAACTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

61

Amino Acids

6.6

Weight (kDa)

4.66

Isoelectric Point (pI)

74.64

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes

No orthologs found for this gene in the current database.

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AjnI CCWGG 2 cut(s) 60, 69
AsuHPI GGTGA 1 cut(s) 105
AxyI CCTNAGG 1 cut(s) 117
BbsI GAAGAC 1 cut(s) 81
BciT130I CCWGG 2 cut(s) 62, 71
BfaI CTAG 1 cut(s) 184
Bme1390I CCNGG 2 cut(s) 62, 71
BmrFI CCNGG 2 cut(s) 62, 71
BpiI GAAGAC 1 cut(s) 81
BplI GAGNNNNNCTC 2 cut(s) 26, 58
BpmI CTGGAG 1 cut(s) 39
BsaJI CCNNGG 1 cut(s) 60
Bse21I CCTNAGG 1 cut(s) 117
BseBI CCWGG 2 cut(s) 62, 71
BseDI CCNNGG 1 cut(s) 60
BseMII CTCAG 1 cut(s) 108
BspCNI CTCAG 1 cut(s) 109
BssECI CCNNGG 1 cut(s) 60
Bst2UI CCWGG 2 cut(s) 62, 71
Bst4CI ACNGT 1 cut(s) 153
Bst6I CTCTTC 1 cut(s) 168
BstDEI CTNAG 1 cut(s) 117
BstMWI GCNNNNNNNGC 1 cut(s) 14
BstNI CCWGG 2 cut(s) 62, 71
BstSCI CCNGG 2 cut(s) 60, 69
BstV2I GAAGAC 1 cut(s) 81
Bsu36I CCTNAGG 1 cut(s) 117
CviJI RGCY 1 cut(s) 65
CviKI_1 RGCY 1 cut(s) 65
DdeI CTNAG 1 cut(s) 117
Eam1104I CTCTTC 1 cut(s) 168
EarI CTCTTC 1 cut(s) 168
Eco81I CCTNAGG 1 cut(s) 117
EcoRII CCWGG 2 cut(s) 60, 69
FaiI YATR 1 cut(s) 143
FspBI CTAG 1 cut(s) 184
GsuI CTGGAG 1 cut(s) 39
HinfI GANTC 1 cut(s) 160
HphI GGTGA 1 cut(s) 105
HpyCH4III ACNGT 1 cut(s) 153
HpyCH4V TGCA 1 cut(s) 157
HpyF10VI GCNNNNNNNGC 1 cut(s) 14
HpyF3I CTNAG 1 cut(s) 117
LpnPI CCDG 6 cut(s) 3, 47, 56, 74, 83, 129
MaeI CTAG 1 cut(s) 184
MaeIII GTNAC 1 cut(s) 123
MboII GAAGA 2 cut(s) 86, 155
MlyI GAGTC 1 cut(s) 154
MnlI CCTC 2 cut(s) 112, 146
MseI TTAA 3 cut(s) 80, 101, 180
MspR9I CCNGG 2 cut(s) 62, 71
MvaI CCWGG 2 cut(s) 62, 71
MwoI GCNNNNNNNGC 1 cut(s) 14
PfoI TCCNGGA 1 cut(s) 69
PleI GAGTC 1 cut(s) 154
PpsI GAGTC 1 cut(s) 154
Psp6I CCWGG 2 cut(s) 60, 69
PspGI CCWGG 2 cut(s) 60, 69
SaqAI TTAA 3 cut(s) 80, 101, 180
SchI GAGTC 1 cut(s) 154
ScrFI CCNGG 2 cut(s) 62, 71
SetI ASST 2 cut(s) 118, 123
SgeI CNNG 8 cut(s) 26, 30, 66, 73, 74, 82, 83, 128
SspI AATATT 1 cut(s) 178
SspMI CTAG 1 cut(s) 184
StyD4I CCNGG 2 cut(s) 60, 69
TaaI ACNGT 1 cut(s) 153
Tru1I TTAA 3 cut(s) 80, 101, 180
Tru9I TTAA 3 cut(s) 80, 101, 180
XspI CTAG 1 cut(s) 184
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.