RchiOBHm_Chr7g0203671

Catalyzes the formation of phosphatidylethanolamine (PtdEtn) from phosphatidylserine (PtdSer). Plays a central role in phospholipid metabolism and in the interorganelle trafficking of phosphatidylserine

Basic Information

Type: gene
Biological Identity
rosa_chinensis
7
N/A
Physical Location & Seq
Reverse (-)
21325885 .. 21328206
2322 bp
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UTR
Exon/CDS
Intron
N/A

Sequence Viewer

Length: 267 bp
ATGCTGGGTGCTCTACATGCTCGTCGGATGTATGAAGACATGAAGGTTGTGGAGGTACATGAGAAGGGAACTGAATTTGAGTTCCAGCCTGATGTAAAAGTTGCTGCCTCTGCGCTCCATTTCAAGATGTTGGGGAGCGTTGACAAGTGTGACTTAGAAGAAGCAGCTCTGCCTATGGATGAATATGCATCATTACGAGATTTCTTTGTACGCACCTTGAAAGAAGGTTCCAGGCCTATTGACCCTGATCCCCAAAATTTTACTTAA

Protein Analysis

88

Amino Acids

10.05

Weight (kDa)

4.92

Isoelectric Point (pI)

31.22

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Orthologous Genes

No orthologs found for this gene in the current database.

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AclWI GGATC 1 cut(s) 242
AcsI RAATTY 2 cut(s) 74, 256
AfaI GTAC 2 cut(s) 57, 210
AgsI TTSAA 2 cut(s) 124, 220
AjnI CCWGG 1 cut(s) 230
AluBI AGCT 1 cut(s) 167
AluI AGCT 1 cut(s) 167
Alw21I GWGCWC 1 cut(s) 13
AlwI GGATC 1 cut(s) 242
AoxI GGCC 1 cut(s) 233
ApeKI GCWGC 2 cut(s) 104, 164
ApoI RAATTY 2 cut(s) 74, 256
AspLEI GCGC 1 cut(s) 115
BbsI GAAGAC 1 cut(s) 42
Bbv12I GWGCWC 1 cut(s) 13
BbvI GCAGC 2 cut(s) 91, 176
BciT130I CCWGG 1 cut(s) 232
BisI GCNGC 2 cut(s) 105, 165
BlsI GCNGC 2 cut(s) 106, 166
Bme1390I CCNGG 1 cut(s) 232
BmiI GGNNCC 1 cut(s) 229
BmrFI CCNGG 1 cut(s) 232
BmsI GCATC 1 cut(s) 197
BpiI GAAGAC 1 cut(s) 42
BseBI CCWGG 1 cut(s) 232
BseGI GGATG 2 cut(s) 33, 184
BseXI GCAGC 2 cut(s) 91, 176
BseYI CCCAGC 1 cut(s) 4
BshFI GGCC 1 cut(s) 235
BsiHKAI GWGCWC 1 cut(s) 13
BsnI GGCC 1 cut(s) 235
Bsp1286I GDGCHC 1 cut(s) 13
Bsp143I GATC 1 cut(s) 247
BspANI GGCC 1 cut(s) 235
BspLI GGNNCC 1 cut(s) 229
BspPI GGATC 1 cut(s) 242
BssMI GATC 1 cut(s) 247
Bst2UI CCWGG 1 cut(s) 232
BstDEI CTNAG 1 cut(s) 154
BstF5I GGATG 2 cut(s) 33, 184
BstHHI GCGC 1 cut(s) 115
BstKTI GATC 1 cut(s) 250
BstMBI GATC 1 cut(s) 247
BstMWI GCNNNNNNNGC 2 cut(s) 17, 110
BstNI CCWGG 1 cut(s) 232
BstNSI RCATGY 1 cut(s) 20
BstSCI CCNGG 1 cut(s) 230
BstV1I GCAGC 2 cut(s) 91, 176
BstV2I GAAGAC 1 cut(s) 42
BsuRI GGCC 1 cut(s) 235
BtsCI GGATG 2 cut(s) 33, 184
CfoI GCGC 1 cut(s) 115
Csp6I GTAC 2 cut(s) 56, 209
CviAII CATG 3 cut(s) 17, 40, 59
CviJI RGCY 3 cut(s) 88, 167, 235
CviKI_1 RGCY 3 cut(s) 88, 167, 235
CviQI GTAC 2 cut(s) 56, 209
DdeI CTNAG 1 cut(s) 154
DpnI GATC 1 cut(s) 249
DpnII GATC 1 cut(s) 247
Eco147I AGGCCT 1 cut(s) 235
EcoRII CCWGG 1 cut(s) 230
EcoT22I ATGCAT 1 cut(s) 190
FaeI CATG 3 cut(s) 20, 43, 62
FaiI YATR 6 cut(s) 18, 33, 41, 60, 176, 186
FalI AAGNNNNNCTT 2 cut(s) 137, 169
FatI CATG 3 cut(s) 16, 39, 58
Fnu4HI GCNGC 2 cut(s) 105, 165
FokI GGATG 2 cut(s) 40, 191
Fsp4HI GCNGC 2 cut(s) 105, 165
GlaI GCGC 1 cut(s) 114
GluI GCNGC 2 cut(s) 105, 165
GsaI CCCAGC 1 cut(s) 8
HaeIII GGCC 1 cut(s) 235
HhaI GCGC 1 cut(s) 115
Hin1II CATG 3 cut(s) 20, 43, 62
Hin6I GCGC 1 cut(s) 113
HinP1I GCGC 1 cut(s) 113
HincII GTYRAC 1 cut(s) 142
HindII GTYRAC 1 cut(s) 142
Hpy166II GTNNAC 1 cut(s) 142
Hpy188I TCNGA 1 cut(s) 27
Hpy188III TCNNGA 1 cut(s) 124
Hpy8I GTNNAC 1 cut(s) 142
Hpy99I CGWCG 1 cut(s) 27
HpyAV CCTTC 3 cut(s) 37, 58, 218
HpyCH4V TGCA 1 cut(s) 188
HpyF10VI GCNNNNNNNGC 2 cut(s) 17, 110
HpyF3I CTNAG 1 cut(s) 154
Hsp92II CATG 3 cut(s) 20, 43, 62
HspAI GCGC 1 cut(s) 113
Kzo9I GATC 1 cut(s) 247
LmnI GCTCC 2 cut(s) 120, 135
LpnPI CCDG 5 cut(s) 98, 102, 217, 244, 258
Lsp1109I GCAGC 2 cut(s) 91, 176
LweI GCATC 1 cut(s) 197
MaeIII GTNAC 1 cut(s) 149
MalI GATC 1 cut(s) 249
MboI GATC 1 cut(s) 247
MboII GAAGA 2 cut(s) 47, 170
MhlI GDGCHC 1 cut(s) 13
MluCI AATT 2 cut(s) 74, 256
MmeI TCCRAC 1 cut(s) 5
MnlI CCTC 2 cut(s) 46, 118
Mph1103I ATGCAT 1 cut(s) 190
MseI TTAA 1 cut(s) 265
MspR9I CCNGG 1 cut(s) 232
MvaI CCWGG 1 cut(s) 232
MwoI GCNNNNNNNGC 2 cut(s) 17, 110
NdeII GATC 1 cut(s) 247
NlaIII CATG 3 cut(s) 20, 43, 62
NlaIV GGNNCC 1 cut(s) 229
NmuCI GTSAC 1 cut(s) 149
NsiI ATGCAT 1 cut(s) 190
NspI RCATGY 1 cut(s) 20
PceI AGGCCT 1 cut(s) 235
PkrI GCNGC 2 cut(s) 106, 166
Psp6I CCWGG 1 cut(s) 230
PspFI CCCAGC 1 cut(s) 4
PspGI CCWGG 1 cut(s) 230
PspN4I GGNNCC 1 cut(s) 229
RsaI GTAC 2 cut(s) 57, 210
RsaNI GTAC 2 cut(s) 56, 209
SaqAI TTAA 1 cut(s) 265
SatI GCNGC 2 cut(s) 105, 165
Sau3AI GATC 1 cut(s) 247
ScrFI CCNGG 1 cut(s) 232
SduI GDGCHC 1 cut(s) 13
SetI ASST 5 cut(s) 48, 57, 169, 218, 229
SfaNI GCATC 1 cut(s) 197
Sse9I AATT 2 cut(s) 74, 256
SseBI AGGCCT 1 cut(s) 235
StuI AGGCCT 1 cut(s) 235
StyD4I CCNGG 1 cut(s) 230
TasI AATT 2 cut(s) 74, 256
Tru1I TTAA 1 cut(s) 265
Tru9I TTAA 1 cut(s) 265
TseFI GTSAC 1 cut(s) 149
TseI GCWGC 2 cut(s) 104, 164
Tsp45I GTSAC 1 cut(s) 149
TspDTI ATGAA 3 cut(s) 48, 56, 195
XapI RAATTY 2 cut(s) 74, 256
XceI RCATGY 1 cut(s) 20
Zsp2I ATGCAT 1 cut(s) 190
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.