RchiOBHm_Chr7g0203951

ORMDL family

Basic Information

Type: gene
Biological Identity
rosa_chinensis
7
Physical Location & Seq
Forward (+)
21538654 .. 21539624
971 bp
Loading structure...
UTR
Exon/CDS
Intron
N/A

Sequence Viewer

Length: 165 bp
ATGGCGAGCCTGTATGTGAAAGCTGTGCTTCCTGCGGATTTGAATAGGAACACAGAGTGGTTCGTGTACCTGGCGTTTGGACCACCTATTTTCTCATCCTCTTCTTCTCTTGGCTCCTTGTGCTCTCGATTTTTGGCTGCTCTCCTGGCGTGGCTTGGACCATAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

54

Amino Acids

5.85

Weight (kDa)

7.93

Isoelectric Point (pI)

40.91

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

Orthologous Genes (Group: OG0030490)

Species Orthologous Gene IDs
rosa_chinensis RchiOBHm_Chr7g0203951 RchiOBHm_Chr7g0203961

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AciI CCGC 1 cut(s) 35
AdeI CACNNNGTG 1 cut(s) 57
AfaI GTAC 1 cut(s) 68
AgsI TTSAA 1 cut(s) 43
AjnI CCWGG 2 cut(s) 69, 144
AluBI AGCT 1 cut(s) 23
AluI AGCT 1 cut(s) 23
Alw21I GWGCWC 1 cut(s) 125
ApeKI GCWGC 1 cut(s) 137
AspS9I GGNCC 2 cut(s) 80, 158
AvaII GGWCC 2 cut(s) 80, 158
Bbv12I GWGCWC 1 cut(s) 125
BbvI GCAGC 1 cut(s) 124
BciT130I CCWGG 2 cut(s) 71, 146
BisI GCNGC 1 cut(s) 138
BlsI GCNGC 1 cut(s) 139
Bme1390I CCNGG 2 cut(s) 71, 146
Bme18I GGWCC 2 cut(s) 80, 158
BmgT120I GGNCC 2 cut(s) 80, 158
BmiI GGNNCC 1 cut(s) 115
BmrFI CCNGG 2 cut(s) 71, 146
BseBI CCWGG 2 cut(s) 71, 146
BseGI GGATG 1 cut(s) 95
BseXI GCAGC 1 cut(s) 124
BsiHKAI GWGCWC 1 cut(s) 125
Bsp1286I GDGCHC 1 cut(s) 125
BspACI CCGC 1 cut(s) 35
BspLI GGNNCC 1 cut(s) 115
Bst2UI CCWGG 2 cut(s) 71, 146
Bst6I CTCTTC 1 cut(s) 106
BstC8I GCNNGC 1 cut(s) 7
BstF5I GGATG 1 cut(s) 95
BstMWI GCNNNNNNNGC 2 cut(s) 120, 146
BstNI CCWGG 2 cut(s) 71, 146
BstSCI CCNGG 2 cut(s) 69, 144
BstV1I GCAGC 1 cut(s) 124
BtsCI GGATG 1 cut(s) 95
Cac8I GCNNGC 1 cut(s) 7
Cfr13I GGNCC 2 cut(s) 80, 158
Csp6I GTAC 1 cut(s) 67
CviJI RGCY 5 cut(s) 9, 23, 114, 137, 154
CviKI_1 RGCY 5 cut(s) 9, 23, 114, 137, 154
CviQI GTAC 1 cut(s) 67
DraIII CACNNNGTG 1 cut(s) 57
Eam1104I CTCTTC 1 cut(s) 106
EarI CTCTTC 1 cut(s) 106
Eco47I GGWCC 2 cut(s) 80, 158
EcoRII CCWGG 2 cut(s) 69, 144
FaiI YATR 2 cut(s) 15, 163
FalI AAGNNNNNCTT 2 cut(s) 12, 44
Fnu4HI GCNGC 1 cut(s) 138
FokI GGATG 1 cut(s) 82
Fsp4HI GCNGC 1 cut(s) 138
GluI GCNGC 1 cut(s) 138
Hpy166II GTNNAC 1 cut(s) 67
Hpy188III TCNNGA 1 cut(s) 126
Hpy8I GTNNAC 1 cut(s) 67
HpyF10VI GCNNNNNNNGC 2 cut(s) 120, 146
LmnI GCTCC 1 cut(s) 119
LpnPI CCDG 6 cut(s) 23, 45, 56, 83, 131, 158
Lsp1109I GCAGC 1 cut(s) 124
MboII GAAGA 2 cut(s) 93, 96
MhlI GDGCHC 1 cut(s) 125
MnlI CCTC 1 cut(s) 109
MspR9I CCNGG 2 cut(s) 71, 146
MvaI CCWGG 2 cut(s) 71, 146
MwoI GCNNNNNNNGC 2 cut(s) 120, 146
NlaIV GGNNCC 1 cut(s) 115
PkrI GCNGC 1 cut(s) 139
Psp6I CCWGG 2 cut(s) 69, 144
PspGI CCWGG 2 cut(s) 69, 144
PspN4I GGNNCC 1 cut(s) 115
PspPI GGNCC 2 cut(s) 80, 158
RsaI GTAC 1 cut(s) 68
RsaNI GTAC 1 cut(s) 67
SatI GCNGC 1 cut(s) 138
Sau96I GGNCC 2 cut(s) 80, 158
ScrFI CCNGG 2 cut(s) 71, 146
SduI GDGCHC 1 cut(s) 125
SetI ASST 3 cut(s) 25, 72, 88
SinI GGWCC 2 cut(s) 80, 158
SsiI CCGC 1 cut(s) 35
StyD4I CCNGG 2 cut(s) 69, 144
TaqI TCGA 1 cut(s) 127
TseI GCWGC 1 cut(s) 137
VpaK11BI GGWCC 2 cut(s) 80, 158
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.