RchiOBHm_Chr7g0207671

No description available

Basic Information

Type: gene
Biological Identity
rosa_chinensis
7
N/A
Physical Location & Seq
Forward (+)
24936035 .. 24937880
1846 bp
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UTR
Exon/CDS
Intron
N/A

Sequence Viewer

Length: 129 bp
ATGAAAATGGAGAAAGCTTTCAGTCTGGTTCAGACAGTTGCAGTGGCAACTGTCTTCTCTGCCGTTTCCGGCTGCTTAATCGAAGACCTTCGCCGCCAGAATCCCAATTCCGATCCACCTCATTCCTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
No domains found.

Protein Analysis

42

Amino Acids

4.58

Weight (kDa)

6.52

Isoelectric Point (pI)

63.87

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Orthologous Genes

No orthologs found for this gene in the current database.

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AciI CCGC 1 cut(s) 94
AclWI GGATC 1 cut(s) 107
AluBI AGCT 1 cut(s) 17
AluI AGCT 1 cut(s) 17
AlwI GGATC 1 cut(s) 107
ApeKI GCWGC 1 cut(s) 72
Asp700I GAANNNNTTC 2 cut(s) 17, 87
BbsI GAAGAC 2 cut(s) 46, 90
BbvI GCAGC 1 cut(s) 59
BceAI ACGGC 1 cut(s) 47
BisI GCNGC 2 cut(s) 73, 94
BlsI GCNGC 2 cut(s) 74, 95
BpiI GAAGAC 2 cut(s) 46, 90
BseXI GCAGC 1 cut(s) 59
BsiSI CCGG 1 cut(s) 69
Bsp143I GATC 1 cut(s) 112
BspACI CCGC 1 cut(s) 94
BspPI GGATC 1 cut(s) 107
BssMI GATC 1 cut(s) 112
Bst4CI ACNGT 2 cut(s) 37, 52
BstKTI GATC 1 cut(s) 115
BstMBI GATC 1 cut(s) 112
BstV1I GCAGC 1 cut(s) 59
BstV2I GAAGAC 2 cut(s) 46, 90
BtsI GCAGTG 1 cut(s) 48
BtsIMutI CAGTG 1 cut(s) 48
CviJI RGCY 2 cut(s) 17, 72
CviKI_1 RGCY 2 cut(s) 17, 72
DpnI GATC 1 cut(s) 114
DpnII GATC 1 cut(s) 112
Fnu4HI GCNGC 2 cut(s) 73, 94
Fsp4HI GCNGC 2 cut(s) 73, 94
GluI GCNGC 2 cut(s) 73, 94
HapII CCGG 1 cut(s) 69
HindIII AAGCTT 1 cut(s) 15
HinfI GANTC 1 cut(s) 100
HpaII CCGG 1 cut(s) 69
Hpy188I TCNGA 2 cut(s) 33, 112
Hpy188III TCNNGA 1 cut(s) 126
HpyAV CCTTC 1 cut(s) 98
HpyCH4III ACNGT 2 cut(s) 37, 52
HpyCH4V TGCA 1 cut(s) 41
Kzo9I GATC 1 cut(s) 112
LpnPI CCDG 3 cut(s) 11, 82, 110
Lsp1109I GCAGC 1 cut(s) 59
MalI GATC 1 cut(s) 114
MboI GATC 1 cut(s) 112
MboII GAAGA 2 cut(s) 46, 95
MluCI AATT 1 cut(s) 106
MnlI CCTC 1 cut(s) 129
MroXI GAANNNNTTC 2 cut(s) 17, 87
MseI TTAA 1 cut(s) 77
MspI CCGG 1 cut(s) 69
NdeII GATC 1 cut(s) 112
PdmI GAANNNNTTC 2 cut(s) 17, 87
PfeI GAWTC 1 cut(s) 100
PkrI GCNGC 2 cut(s) 74, 95
SaqAI TTAA 1 cut(s) 77
SatI GCNGC 2 cut(s) 73, 94
Sau3AI GATC 1 cut(s) 112
SetI ASST 3 cut(s) 19, 90, 121
SgeI CNNG 3 cut(s) 38, 81, 109
Sse9I AATT 1 cut(s) 106
SsiI CCGC 1 cut(s) 94
TaaI ACNGT 2 cut(s) 37, 52
TaqI TCGA 1 cut(s) 81
TasI AATT 1 cut(s) 106
TauI GCSGC 1 cut(s) 96
TfiI GAWTC 1 cut(s) 100
Tru1I TTAA 1 cut(s) 77
Tru9I TTAA 1 cut(s) 77
TscAI CASTG 1 cut(s) 48
TseI GCWGC 1 cut(s) 72
TspDTI ATGAA 1 cut(s) 17
TspRI CASTG 1 cut(s) 48
XmnI GAANNNNTTC 2 cut(s) 17, 87
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.