RchiOBHm_Chr7g0214491

UNC93-like protein

Basic Information

Type: gene
Biological Identity
rosa_chinensis
7
N/A
Physical Location & Seq
Forward (+)
31821249 .. 31822301
1053 bp
Loading structure...
UTR
Exon/CDS
Intron
N/A

Sequence Viewer

Length: 339 bp
ATGGCTATGAATTTATGTTGTCTGAGTTTCACACTTAGCCAAAATTCAAATTTTTTGACTCCCTCTATCAACTTTGCCTACCATTTTTTGGCCAAATTTAAACTCCCTGCTTTTCACAAAACTCCTCGTTTTATTTTGGGAAAGGAAAAAAAGGGTTCAGATTCAACCTCTCTCCTAGCTCCCCAACTCTCCTCTCTGTCTCTGTCTCTGTCTATCTGTCTGTCTGTCTCTCTCTCTGTCTGTCTCTCTGTGGTTAGGAATCTGGGATCAAAGAATGCTTTGATTCTTGAGACTACTGGATATTGGTTGTCCATTGCTAAAAATTTAAATCCAACTTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

112

Amino Acids

12.22

Weight (kDa)

9.59

Isoelectric Point (pI)

28.19

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes

No orthologs found for this gene in the current database.

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB7I CCANNNNNTGG 1 cut(s) 88
AclWI GGATC 1 cut(s) 274
AcoI YGGCCR 1 cut(s) 90
AcsI RAATTY 5 cut(s) 10, 43, 49, 95, 322
AfiI CCNNNNNNNGG 1 cut(s) 88
AgsI TTSAA 2 cut(s) 48, 165
AluBI AGCT 1 cut(s) 179
AluI AGCT 1 cut(s) 179
Alw26I GTCTC 5 cut(s) 204, 210, 232, 248, 284
AlwI GGATC 1 cut(s) 274
AoxI GGCC 1 cut(s) 90
ApoI RAATTY 5 cut(s) 10, 43, 49, 95, 322
BalI TGGCCA 1 cut(s) 92
BcoDI GTCTC 5 cut(s) 204, 210, 232, 248, 284
BfaI CTAG 1 cut(s) 176
BpuEI CTTGAG 1 cut(s) 308
Bsc4I CCNNNNNNNGG 1 cut(s) 88
Bse1I ACTGG 1 cut(s) 301
Bse3DI GCAATG 1 cut(s) 312
BseLI CCNNNNNNNGG 1 cut(s) 88
BseMI GCAATG 1 cut(s) 312
BseMII CTCAG 1 cut(s) 14
BseNI ACTGG 1 cut(s) 301
BseRI GAGGAG 2 cut(s) 114, 181
BshFI GGCC 1 cut(s) 92
BslI CCNNNNNNNGG 1 cut(s) 88
BsmAI GTCTC 5 cut(s) 204, 210, 232, 248, 284
BsmI GAATGC 1 cut(s) 280
BsnI GGCC 1 cut(s) 92
Bsp143I GATC 1 cut(s) 266
BspANI GGCC 1 cut(s) 92
BspCNI CTCAG 1 cut(s) 15
BspPI GGATC 1 cut(s) 274
BsrDI GCAATG 1 cut(s) 312
BsrI ACTGG 1 cut(s) 301
BssMI GATC 1 cut(s) 266
BstDEI CTNAG 3 cut(s) 23, 35, 336
BstKTI GATC 1 cut(s) 269
BstMAI GTCTC 5 cut(s) 204, 210, 232, 248, 284
BstMBI GATC 1 cut(s) 266
BsuRI GGCC 1 cut(s) 92
CviJI RGCY 4 cut(s) 5, 39, 92, 179
CviKI_1 RGCY 4 cut(s) 5, 39, 92, 179
DdeI CTNAG 3 cut(s) 23, 35, 336
DpnI GATC 1 cut(s) 268
DpnII GATC 1 cut(s) 266
DraI TTTAAA 2 cut(s) 100, 327
EaeI YGGCCR 1 cut(s) 90
FaiI YATR 2 cut(s) 8, 16
FspBI CTAG 1 cut(s) 176
HaeIII GGCC 1 cut(s) 92
HinfI GANTC 4 cut(s) 58, 161, 259, 283
Hpy188I TCNGA 2 cut(s) 24, 160
Hpy188III TCNNGA 1 cut(s) 287
HpyF3I CTNAG 3 cut(s) 23, 35, 336
Kzo9I GATC 1 cut(s) 266
LmnI GCTCC 1 cut(s) 184
LpnPI CCDG 3 cut(s) 120, 248, 282
MaeI CTAG 1 cut(s) 176
MalI GATC 1 cut(s) 268
MboI GATC 1 cut(s) 266
MlsI TGGCCA 1 cut(s) 92
MluCI AATT 5 cut(s) 10, 43, 49, 95, 322
MluNI TGGCCA 1 cut(s) 92
MlyI GAGTC 1 cut(s) 52
MnlI CCTC 4 cut(s) 73, 135, 178, 202
Mox20I TGGCCA 1 cut(s) 92
MscI TGGCCA 1 cut(s) 92
MseI TTAA 2 cut(s) 99, 326
Msp20I TGGCCA 1 cut(s) 92
Mva1269I GAATGC 1 cut(s) 280
NdeII GATC 1 cut(s) 266
PctI GAATGC 1 cut(s) 280
PfeI GAWTC 3 cut(s) 161, 259, 283
PflMI CCANNNNNTGG 1 cut(s) 88
PleI GAGTC 1 cut(s) 52
PpsI GAGTC 1 cut(s) 52
SaqAI TTAA 2 cut(s) 99, 326
Sau3AI GATC 1 cut(s) 266
SchI GAGTC 1 cut(s) 52
SetI ASST 2 cut(s) 170, 181
SgeI CNNG 6 cut(s) 119, 138, 188, 275, 299, 309
SmiI ATTTAAAT 1 cut(s) 327
SmlI CTYRAG 1 cut(s) 287
SmoI CTYRAG 1 cut(s) 287
Sse9I AATT 5 cut(s) 10, 43, 49, 95, 322
SspMI CTAG 1 cut(s) 176
SwaI ATTTAAAT 1 cut(s) 327
TasI AATT 5 cut(s) 10, 43, 49, 95, 322
TfiI GAWTC 3 cut(s) 161, 259, 283
Tru1I TTAA 2 cut(s) 99, 326
Tru9I TTAA 2 cut(s) 99, 326
TspDTI ATGAA 1 cut(s) 23
Van91I CCANNNNNTGG 1 cut(s) 88
XapI RAATTY 5 cut(s) 10, 43, 49, 95, 322
XspI CTAG 1 cut(s) 176
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.