RchiOBHm_Chr7g0216281

Belongs to the 14-3-3 family

Basic Information

Type: gene
Biological Identity
rosa_chinensis
7
N/A
Physical Location & Seq
Reverse (-)
33875194 .. 33875530
337 bp
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UTR
Exon/CDS
Intron
N/A

Sequence Viewer

Length: 249 bp
ATGCAACTCTTGAGGGACAACCTCACATTGTGGACATCTGACATCCCGGAGGATGGAGTTTCTCTCAAGTTGGATTTTATCTTATTTTCTTTTATCTTGAGGATGGTGGCTTTCTGGATTAATGTCATTTCATGCGGATGCATTAGTAAGGACTTGTCGTATCTTGTTTCAAGTCTTGGATGTTTATTTGTGACTTCAAATTTGGGAGTGTCTTTTGACAATTTATTAGATGGAGTAATGGTTGTCTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
Pfam Domains
Protein Families

Protein Analysis

82

Amino Acids

9.12

Weight (kDa)

4.14

Isoelectric Point (pI)

29.68

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes

No orthologs found for this gene in the current database.

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AciI CCGC 1 cut(s) 135
AcsI RAATTY 1 cut(s) 199
AdeI CACNNNGTG 1 cut(s) 30
AfiI CCNNNNNNNGG 1 cut(s) 53
AgsI TTSAA 2 cut(s) 171, 198
ApoI RAATTY 1 cut(s) 199
ArsI GACNNNNNNTTYG 2 cut(s) 184, 216
AseI ATTAAT 1 cut(s) 120
AsuC2I CCSGG 1 cut(s) 47
BccI CCATC 3 cut(s) 47, 97, 224
BcnI CCSGG 1 cut(s) 47
Bme1390I CCNGG 1 cut(s) 47
BmrFI CCNGG 1 cut(s) 47
BmsI GCATC 1 cut(s) 128
BplI GAGNNNNNCTC 2 cut(s) 48, 80
BpuEI CTTGAG 3 cut(s) 31, 50, 118
BpuMI CCSGG 1 cut(s) 47
BsaXI ACNNNNNCTCC 1 cut(s) 225
Bsc4I CCNNNNNNNGG 1 cut(s) 53
BseGI GGATG 5 cut(s) 42, 58, 108, 143, 185
BseLI CCNNNNNNNGG 1 cut(s) 53
BsiSI CCGG 1 cut(s) 47
BslFI GGGAC 1 cut(s) 29
BslI CCNNNNNNNGG 1 cut(s) 53
BsmFI GGGAC 1 cut(s) 29
BspACI CCGC 1 cut(s) 135
BstF5I GGATG 5 cut(s) 42, 58, 108, 143, 185
BstSCI CCNGG 1 cut(s) 45
BtsCI GGATG 5 cut(s) 42, 58, 108, 143, 185
CviAII CATG 1 cut(s) 132
CviJI RGCY 1 cut(s) 110
CviKI_1 RGCY 1 cut(s) 110
DraIII CACNNNGTG 1 cut(s) 30
EcoT22I ATGCAT 1 cut(s) 143
FaeI CATG 1 cut(s) 135
FaiI YATR 1 cut(s) 133
FaqI GGGAC 1 cut(s) 29
FatI CATG 1 cut(s) 131
FokI GGATG 5 cut(s) 29, 65, 115, 150, 192
HapII CCGG 1 cut(s) 47
Hin1II CATG 1 cut(s) 135
HpaII CCGG 1 cut(s) 47
Hpy166II GTNNAC 1 cut(s) 33
Hpy188I TCNGA 2 cut(s) 40, 248
Hpy188III TCNNGA 3 cut(s) 10, 97, 115
Hpy8I GTNNAC 1 cut(s) 33
HpyCH4V TGCA 2 cut(s) 4, 141
Hsp92II CATG 1 cut(s) 135
LpnPI CCDG 2 cut(s) 60, 100
LweI GCATC 1 cut(s) 128
MaeIII GTNAC 1 cut(s) 190
MluCI AATT 2 cut(s) 199, 220
MmeI TCCRAC 1 cut(s) 51
MnlI CCTC 4 cut(s) 6, 32, 43, 93
Mph1103I ATGCAT 1 cut(s) 143
MseI TTAA 1 cut(s) 120
MslI CAYNNNNRTG 1 cut(s) 136
MspI CCGG 1 cut(s) 47
MspR9I CCNGG 1 cut(s) 47
NciI CCSGG 1 cut(s) 47
NlaIII CATG 1 cut(s) 135
NmuCI GTSAC 1 cut(s) 190
NsiI ATGCAT 1 cut(s) 143
PfoI TCCNGGA 1 cut(s) 45
PshBI ATTAAT 1 cut(s) 120
RseI CAYNNNNRTG 1 cut(s) 136
SaqAI TTAA 1 cut(s) 120
ScrFI CCNGG 1 cut(s) 47
SetI ASST 1 cut(s) 24
SfaNI GCATC 1 cut(s) 128
SmiMI CAYNNNNRTG 1 cut(s) 136
SmlI CTYRAG 3 cut(s) 10, 65, 97
SmoI CTYRAG 3 cut(s) 10, 65, 97
Sse9I AATT 2 cut(s) 199, 220
SsiI CCGC 1 cut(s) 135
StyD4I CCNGG 1 cut(s) 45
TasI AATT 2 cut(s) 199, 220
Tru1I TTAA 1 cut(s) 120
Tru9I TTAA 1 cut(s) 120
TseFI GTSAC 1 cut(s) 190
Tsp45I GTSAC 1 cut(s) 190
TspDTI ATGAA 1 cut(s) 120
VspI ATTAAT 1 cut(s) 120
XapI RAATTY 1 cut(s) 199
Zsp2I ATGCAT 1 cut(s) 143
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.