RchiOBHm_Chr7g0217131

ACT domain-containing protein

Basic Information

Type: gene
Biological Identity
rosa_chinensis
7
N/A
Physical Location & Seq
Forward (+)
35041106 .. 35041929
824 bp
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UTR
Exon/CDS
Intron
N/A

Sequence Viewer

Length: 234 bp
ATGAAGGTGGATTGGGAGAGCTTGAAGGAGTGGCTTCTCTCCGCGTGTCCATCTTCGTGTTTCTATAAGAAAGGTGTTGTTGATTTTTGTGTAGATGTTACTAAAGTGCTGTGTGAGCTTGAGATGCTTATTCAGAGAGTGAAAGTGATGCCAAACCCAGATGGGAGGGTTTTGGACCTGTTCTTCATCACTGATTGCTTGATTTATTGCCCCGTCTTTCACTTCAGTGACTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

77

Amino Acids

8.96

Weight (kDa)

4.93

Isoelectric Point (pI)

29.41

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes

No orthologs found for this gene in the current database.

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccII CGCG 1 cut(s) 44
AciI CCGC 1 cut(s) 42
AcuI CTGAAG 1 cut(s) 208
AgsI TTSAA 1 cut(s) 25
AleI CACNNNNGTG 1 cut(s) 225
AluBI AGCT 2 cut(s) 21, 118
AluI AGCT 2 cut(s) 21, 118
AlwNI CAGNNNCTG 1 cut(s) 231
AspS9I GGNCC 1 cut(s) 175
AvaII GGWCC 1 cut(s) 175
BccI CCATC 2 cut(s) 58, 155
Bme18I GGWCC 1 cut(s) 175
BmgT120I GGNCC 1 cut(s) 175
BmsI GCATC 2 cut(s) 114, 138
BpuEI CTTGAG 1 cut(s) 140
Bsh1236I CGCG 1 cut(s) 44
BspACI CCGC 1 cut(s) 42
BspFNI CGCG 1 cut(s) 44
BstFNI CGCG 1 cut(s) 44
BstMWI GCNNNNNNNGC 2 cut(s) 115, 124
BstUI CGCG 1 cut(s) 44
BtsIMutI CAGTG 2 cut(s) 189, 232
CaiI CAGNNNCTG 1 cut(s) 231
Cfr13I GGNCC 1 cut(s) 175
CviJI RGCY 3 cut(s) 21, 34, 118
CviKI_1 RGCY 3 cut(s) 21, 34, 118
Eco47I GGWCC 1 cut(s) 175
Eco57I CTGAAG 1 cut(s) 208
FaiI YATR 1 cut(s) 66
Hpy188I TCNGA 1 cut(s) 135
HpyAV CCTTC 1 cut(s) 19
HpyF10VI GCNNNNNNNGC 2 cut(s) 115, 124
LpnPI CCDG 2 cut(s) 171, 191
LweI GCATC 2 cut(s) 114, 138
MaeIII GTNAC 2 cut(s) 97, 227
MboII GAAGA 2 cut(s) 45, 175
MnlI CCTC 1 cut(s) 159
MslI CAYNNNNRTG 2 cut(s) 55, 225
MvnI CGCG 1 cut(s) 44
MwoI GCNNNNNNNGC 2 cut(s) 115, 124
NmuCI GTSAC 1 cut(s) 227
OliI CACNNNNGTG 1 cut(s) 225
PspPI GGNCC 1 cut(s) 175
PstNI CAGNNNCTG 1 cut(s) 231
RseI CAYNNNNRTG 2 cut(s) 55, 225
Sau96I GGNCC 1 cut(s) 175
SetI ASST 5 cut(s) 9, 23, 76, 120, 180
SfaNI GCATC 2 cut(s) 114, 138
SgeI CNNG 9 cut(s) 34, 55, 57, 69, 131, 170, 190, 211, 224
SinI GGWCC 1 cut(s) 175
SmiMI CAYNNNNRTG 2 cut(s) 55, 225
SmlI CTYRAG 1 cut(s) 119
SmoI CTYRAG 1 cut(s) 119
SsiI CCGC 1 cut(s) 42
TscAI CASTG 2 cut(s) 196, 232
TseFI GTSAC 1 cut(s) 227
Tsp45I GTSAC 1 cut(s) 227
TspDTI ATGAA 2 cut(s) 17, 175
TspRI CASTG 2 cut(s) 196, 232
VpaK11BI GGWCC 1 cut(s) 175
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.