RchiOBHm_Chr6g0251311

Essential subunit of the N-oligosaccharyl transferase (OST) complex which catalyzes the transfer of a high mannose oligosaccharide from a lipid-linked oligosaccharide donor to an asparagine residue within an Asn-X-Ser Thr consensus motif in nascent polypeptide chains

Basic Information

Type: gene
Biological Identity
rosa_chinensis
6
N/A
Physical Location & Seq
Reverse (-)
6585222 .. 6586591
1370 bp
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UTR
Exon/CDS
Intron
N/A

Sequence Viewer

Length: 159 bp
ATGGTGAAGCCTTCGTCATCGTCGTCCTCTACGAGCCAGGACGCCCTTGCCCTTTTCAATTCTCTGAGATCGGCTTACTCCGCCACTCCTACCGCTCTCAAGATCATTGATCTCTATGTTGGTTTCGCTGTATCCACAGCTATCATCCAGCCAAAATGA

Protein Analysis

52

Amino Acids

5.44

Weight (kDa)

9.4

Isoelectric Point (pI)

48.39

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Orthologous Genes

No orthologs found for this gene in the current database.

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccBSI CCGCTC 1 cut(s) 95
AciI CCGC 2 cut(s) 81, 93
AcyI GRCGYC 1 cut(s) 42
AgsI TTSAA 1 cut(s) 58
AjnI CCWGG 1 cut(s) 36
AluBI AGCT 1 cut(s) 140
AluI AGCT 1 cut(s) 140
AsuHPI GGTGA 1 cut(s) 16
BciT130I CCWGG 1 cut(s) 38
BciVI GTATCC 1 cut(s) 142
BfuI GTATCC 1 cut(s) 142
Bme1390I CCNGG 1 cut(s) 38
BmrFI CCNGG 1 cut(s) 38
BpuEI CTTGAG 1 cut(s) 83
BsaHI GRCGYC 1 cut(s) 42
BseBI CCWGG 1 cut(s) 38
BseGI GGATG 1 cut(s) 144
BseMII CTCAG 1 cut(s) 56
Bsp143I GATC 3 cut(s) 68, 102, 109
BspACI CCGC 2 cut(s) 81, 93
BspCNI CTCAG 1 cut(s) 57
BsrBI CCGCTC 1 cut(s) 95
BssMI GATC 3 cut(s) 68, 102, 109
BssNI GRCGYC 1 cut(s) 42
Bst2UI CCWGG 1 cut(s) 38
BstACI GRCGYC 1 cut(s) 42
BstDEI CTNAG 1 cut(s) 65
BstF5I GGATG 1 cut(s) 144
BstKTI GATC 3 cut(s) 71, 105, 112
BstMBI GATC 3 cut(s) 68, 102, 109
BstMWI GCNNNNNNNGC 1 cut(s) 80
BstNI CCWGG 1 cut(s) 38
BstSCI CCNGG 1 cut(s) 36
BsuI GTATCC 1 cut(s) 142
BtsCI GGATG 1 cut(s) 144
CseI GACGC 1 cut(s) 50
CviJI RGCY 5 cut(s) 10, 36, 74, 140, 151
CviKI_1 RGCY 5 cut(s) 10, 36, 74, 140, 151
DdeI CTNAG 1 cut(s) 65
DpnI GATC 3 cut(s) 70, 104, 111
DpnII GATC 3 cut(s) 68, 102, 109
EciI GGCGGA 1 cut(s) 70
EcoRII CCWGG 1 cut(s) 36
FaiI YATR 1 cut(s) 117
FokI GGATG 1 cut(s) 131
HgaI GACGC 1 cut(s) 50
Hin1I GRCGYC 1 cut(s) 42
HphI GGTGA 1 cut(s) 16
Hpy188I TCNGA 1 cut(s) 66
Hpy188III TCNNGA 1 cut(s) 100
Hpy99I CGWCG 1 cut(s) 25
HpyAV CCTTC 1 cut(s) 21
HpyF10VI GCNNNNNNNGC 1 cut(s) 80
HpyF3I CTNAG 1 cut(s) 65
Hsp92I GRCGYC 1 cut(s) 42
Kzo9I GATC 3 cut(s) 68, 102, 109
LpnPI CCDG 2 cut(s) 23, 50
MalI GATC 3 cut(s) 70, 104, 111
MbiI CCGCTC 1 cut(s) 95
MboI GATC 3 cut(s) 68, 102, 109
MluCI AATT 1 cut(s) 58
MnlI CCTC 1 cut(s) 37
MspR9I CCNGG 1 cut(s) 38
MvaI CCWGG 1 cut(s) 38
MwoI GCNNNNNNNGC 1 cut(s) 80
NdeII GATC 3 cut(s) 68, 102, 109
PcsI WCGNNNNNNNCGW 2 cut(s) 20, 29
Psp6I CCWGG 1 cut(s) 36
PspGI CCWGG 1 cut(s) 36
Sau3AI GATC 3 cut(s) 68, 102, 109
ScrFI CCNGG 1 cut(s) 38
SetI ASST 1 cut(s) 142
SgeI CNNG 5 cut(s) 45, 49, 50, 59, 112
SmlI CTYRAG 1 cut(s) 98
SmoI CTYRAG 1 cut(s) 98
Sse9I AATT 1 cut(s) 58
SsiI CCGC 2 cut(s) 81, 93
StyD4I CCNGG 1 cut(s) 36
TasI AATT 1 cut(s) 58
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.