RchiOBHm_Chr6g0252501

magnesium transporter

Basic Information

Type: gene
Biological Identity
rosa_chinensis
6
N/A
Physical Location & Seq
Forward (+)
7651403 .. 7652024
622 bp
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UTR
Exon/CDS
Intron
N/A

Sequence Viewer

Length: 351 bp
ATGGTTCTTCCCTTTGAGTTTGTGGCATTAGAGACTTGTCTGGAGGCTGCTTGCACGCAAAGGGATTGGAGAAAGAAGCTCATCCAGCTTTGGATAAGCTCAGTTCAAAGATTAGTACTAGATTCAAAGTACTTTGAATCTAGAACGTGTTCGCCAAATCAAAAGTCGTTTGGTTGCTATATCAGGACGTGTCCAGAAGGTAATCCACTAAATTGGGATTTCATTGCGTTTCTTCGGGGTTCTACTGAACATGCAACGGATCAAAGGTTTACACAAAATGTGAGGGATGAAATAGAACATTTGGTAGATGATGATGAAGATATGGTTGAGATGTATCTGACAGACAATTAA

Protein Analysis

116

Amino Acids

13.66

Weight (kDa)

4.63

Isoelectric Point (pI)

41.06

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Orthologous Genes

No orthologs found for this gene in the current database.

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AclWI GGATC 1 cut(s) 267
AfaI GTAC 2 cut(s) 117, 131
AflIII ACRYGT 2 cut(s) 146, 188
AgsI TTSAA 3 cut(s) 107, 126, 137
AjiI CACGTC 1 cut(s) 189
AluBI AGCT 3 cut(s) 79, 88, 99
AluI AGCT 3 cut(s) 79, 88, 99
Alw26I GTCTC 1 cut(s) 26
AlwI GGATC 1 cut(s) 267
ApeKI GCWGC 1 cut(s) 47
ArsI GACNNNNNNTTYG 2 cut(s) 149, 181
Asp700I GAANNNNTTC 1 cut(s) 148
BbvI GCAGC 1 cut(s) 34
BcoDI GTCTC 1 cut(s) 26
BfaI CTAG 2 cut(s) 119, 141
BisI GCNGC 1 cut(s) 48
BlsI GCNGC 1 cut(s) 49
BmcAI AGTACT 2 cut(s) 117, 131
BmgBI CACGTC 1 cut(s) 189
BpmI CTGGAG 1 cut(s) 62
Bse3DI GCAATG 1 cut(s) 222
BseGI GGATG 2 cut(s) 81, 292
BseMI GCAATG 1 cut(s) 222
BseMII CTCAG 1 cut(s) 114
BseXI GCAGC 1 cut(s) 34
BsmAI GTCTC 1 cut(s) 26
Bsp143I GATC 1 cut(s) 259
BspCNI CTCAG 1 cut(s) 113
BspPI GGATC 1 cut(s) 267
BsrDI GCAATG 1 cut(s) 222
BssMI GATC 1 cut(s) 259
BstC8I GCNNGC 2 cut(s) 52, 56
BstDEI CTNAG 1 cut(s) 100
BstF5I GGATG 2 cut(s) 81, 292
BstKTI GATC 1 cut(s) 262
BstMAI GTCTC 1 cut(s) 26
BstMBI GATC 1 cut(s) 259
BstMWI GCNNNNNNNGC 1 cut(s) 85
BstNSI RCATGY 1 cut(s) 254
BstV1I GCAGC 1 cut(s) 34
BstXI CCANNNNNNTGG 1 cut(s) 213
BtrI CACGTC 1 cut(s) 189
BtsCI GGATG 2 cut(s) 81, 292
Cac8I GCNNGC 2 cut(s) 52, 56
Csp6I GTAC 2 cut(s) 116, 130
CviAII CATG 1 cut(s) 251
CviJI RGCY 4 cut(s) 47, 79, 88, 99
CviKI_1 RGCY 4 cut(s) 47, 79, 88, 99
CviQI GTAC 2 cut(s) 116, 130
DdeI CTNAG 1 cut(s) 100
DpnI GATC 1 cut(s) 261
DpnII GATC 1 cut(s) 259
FaeI CATG 1 cut(s) 254
FaiI YATR 3 cut(s) 180, 252, 323
FatI CATG 1 cut(s) 250
Fnu4HI GCNGC 1 cut(s) 48
FokI GGATG 2 cut(s) 68, 299
Fsp4HI GCNGC 1 cut(s) 48
FspBI CTAG 2 cut(s) 119, 141
GluI GCNGC 1 cut(s) 48
GsuI CTGGAG 1 cut(s) 62
Hin1II CATG 1 cut(s) 254
HinfI GANTC 2 cut(s) 122, 137
Hpy166II GTNNAC 1 cut(s) 270
Hpy188I TCNGA 1 cut(s) 339
Hpy188III TCNNGA 4 cut(s) 41, 141, 184, 194
Hpy8I GTNNAC 1 cut(s) 270
HpyAV CCTTC 1 cut(s) 191
HpyCH4IV ACGT 2 cut(s) 146, 188
HpyCH4V TGCA 2 cut(s) 54, 254
HpyF10VI GCNNNNNNNGC 1 cut(s) 85
HpyF3I CTNAG 1 cut(s) 100
HpySE526I ACGT 2 cut(s) 146, 188
Hsp92II CATG 1 cut(s) 254
Kzo9I GATC 1 cut(s) 259
LpnPI CCDG 4 cut(s) 26, 98, 169, 207
Lsp1109I GCAGC 1 cut(s) 34
MaeI CTAG 2 cut(s) 119, 141
MaeII ACGT 2 cut(s) 146, 188
MalI GATC 1 cut(s) 261
MboI GATC 1 cut(s) 259
MboII GAAGA 2 cut(s) 224, 329
MluCI AATT 2 cut(s) 211, 346
MnlI CCTC 2 cut(s) 37, 276
MroXI GAANNNNTTC 1 cut(s) 148
MseI TTAA 1 cut(s) 349
MwoI GCNNNNNNNGC 1 cut(s) 85
NdeII GATC 1 cut(s) 259
NlaIII CATG 1 cut(s) 254
NspI RCATGY 1 cut(s) 254
PdmI GAANNNNTTC 1 cut(s) 148
PfeI GAWTC 2 cut(s) 122, 137
PkrI GCNGC 1 cut(s) 49
RsaI GTAC 2 cut(s) 117, 131
RsaNI GTAC 2 cut(s) 116, 130
SaqAI TTAA 1 cut(s) 349
SatI GCNGC 1 cut(s) 48
Sau3AI GATC 1 cut(s) 259
ScaI AGTACT 2 cut(s) 117, 131
SetI ASST 7 cut(s) 81, 90, 101, 149, 191, 202, 269
Sse9I AATT 2 cut(s) 211, 346
SspMI CTAG 2 cut(s) 119, 141
TaiI ACGT 2 cut(s) 149, 191
TasI AATT 2 cut(s) 211, 346
TatI WGTACW 2 cut(s) 115, 129
TfiI GAWTC 2 cut(s) 122, 137
Tru1I TTAA 1 cut(s) 349
Tru9I TTAA 1 cut(s) 349
TseI GCWGC 1 cut(s) 47
TspDTI ATGAA 3 cut(s) 211, 303, 330
TspGWI ACGGA 1 cut(s) 272
XbaI TCTAGA 1 cut(s) 140
XceI RCATGY 1 cut(s) 254
XmnI GAANNNNTTC 1 cut(s) 148
XspI CTAG 2 cut(s) 119, 141
ZrmI AGTACT 2 cut(s) 117, 131
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.