RchiOBHm_Chr6g0257101

Catalyzes the phosphorylation of D-fructose 6-phosphate to fructose 1,6-bisphosphate by ATP, the first committing step of glycolysis

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_chinensis
6
N/A
Physical Location & Seq
Reverse (-)
12354579 .. 12356993
2415 bp
Loading structure...
UTR
Exon/CDS
Intron
N/A

Sequence Viewer

Length: 180 bp
ATGGTTATTGTGATCGTTGAGGGAGCAGGACAGGGTCTTATTTCAGAGAGGTTGCAATCCGTGAACCAGCAAGATGCTTCAGGAAACAAGCTACTTAAAGATGTTGGGTTTCTTGGTCTGCAAGATTTTGATCACCTGAGCATGAACTTTCTACAATTTGTTATTGTATTTATGAAATGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0003674 GO:0003824 GO:0003872 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005829 GO:0005975 GO:0006082 GO:0006090 GO:0006091 GO:0006096 GO:0006139 GO:0006163 GO:0006164 GO:0006165 GO:0006725 GO:0006732 GO:0006733 GO:0006753 GO:0006754 GO:0006757 GO:0006793 GO:0006796 GO:0006807 GO:0008150 GO:0008152 GO:0008443 GO:0009056 GO:0009058 GO:0009108 GO:0009117 GO:0009123 GO:0009124 GO:0009126 GO:0009127 GO:0009132 GO:0009135 GO:0009141 GO:0009142 GO:0009144 GO:0009145 GO:0009150 GO:0009152 GO:0009156 GO:0009161 GO:0009165 GO:0009166 GO:0009167 GO:0009168 GO:0009179 GO:0009185 GO:0009199 GO:0009201 GO:0009205 GO:0009206 GO:0009259 GO:0009260 GO:0009987 GO:0016052 GO:0016053 GO:0016301 GO:0016310 GO:0016740 GO:0016772 GO:0016773 GO:0017144 GO:0018130 GO:0019200 GO:0019359 GO:0019362 GO:0019363 GO:0019438 GO:0019439 GO:0019637 GO:0019693 GO:0019752 GO:0032787 GO:0034404 GO:0034641 GO:0034654 GO:0034655 GO:0042866 GO:0043436 GO:0044237 GO:0044238 GO:0044248 GO:0044249 GO:0044262 GO:0044270 GO:0044271 GO:0044281 GO:0044283 GO:0044424 GO:0044444 GO:0044464 GO:0046031 GO:0046034 GO:0046390 GO:0046394 GO:0046434 GO:0046483 GO:0046496 GO:0046700 GO:0046835 GO:0046939 GO:0051186 GO:0051188 GO:0055086 GO:0061615 GO:0071704 GO:0072330 GO:0072521 GO:0072522 GO:0072524 GO:0072525 GO:0090407 GO:1901135 GO:1901137 GO:1901292 GO:1901293 GO:1901360 GO:1901361 GO:1901362 GO:1901564 GO:1901566 GO:1901575 GO:1901576
KEGG Pathways
Metabolic & Signaling
ko00010 ko00030 ko00051 ko00052 ko00680 ko01100 ko01110 ko01120 ko01130 ko01200 ko01230 ko03018 ko04152 ko05230 map00010 map00030 map00051 map00052 map00680 map01100 map01110 map01120 map01130 map01200 map01230 map03018 map04152 map05230
Pfam Domains
Protein Families
PFK

Protein Analysis

59

Amino Acids

6.54

Weight (kDa)

4.89

Isoelectric Point (pI)

35.12

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes

No orthologs found for this gene in the current database.

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AcuI CTGAAG 1 cut(s) 63
AluBI AGCT 1 cut(s) 91
AluI AGCT 1 cut(s) 91
AsuHPI GGTGA 1 cut(s) 125
BclI TGATCA 1 cut(s) 130
BmsI GCATC 1 cut(s) 64
Bpu10I CCTNAGC 1 cut(s) 137
BsaBI GATNNNNATC 1 cut(s) 129
Bse8I GATNNNNATC 1 cut(s) 129
BseJI GATNNNNATC 1 cut(s) 129
BseMII CTCAG 1 cut(s) 128
Bsp143I GATC 2 cut(s) 12, 130
BspCNI CTCAG 1 cut(s) 129
BssMI GATC 2 cut(s) 12, 130
BstDEI CTNAG 1 cut(s) 137
BstKTI GATC 2 cut(s) 15, 133
BstMBI GATC 2 cut(s) 12, 130
CviAII CATG 1 cut(s) 142
CviJI RGCY 1 cut(s) 91
CviKI_1 RGCY 1 cut(s) 91
DdeI CTNAG 1 cut(s) 137
DpnI GATC 2 cut(s) 14, 132
DpnII GATC 2 cut(s) 12, 130
Eco57I CTGAAG 1 cut(s) 63
FaeI CATG 1 cut(s) 145
FaiI YATR 2 cut(s) 143, 173
FatI CATG 1 cut(s) 141
FbaI TGATCA 1 cut(s) 130
Hin1II CATG 1 cut(s) 145
HphI GGTGA 1 cut(s) 125
Hpy166II GTNNAC 1 cut(s) 64
Hpy188I TCNGA 1 cut(s) 46
Hpy188III TCNNGA 1 cut(s) 81
Hpy8I GTNNAC 1 cut(s) 64
HpyCH4V TGCA 2 cut(s) 55, 121
HpyF3I CTNAG 1 cut(s) 137
Hsp92II CATG 1 cut(s) 145
Ksp22I TGATCA 1 cut(s) 130
Kzo9I GATC 2 cut(s) 12, 130
LmnI GCTCC 1 cut(s) 23
LpnPI CCDG 5 cut(s) 12, 17, 66, 80, 149
LweI GCATC 1 cut(s) 64
MalI GATC 2 cut(s) 14, 132
MboI GATC 2 cut(s) 12, 130
MluCI AATT 1 cut(s) 155
MnlI CCTC 2 cut(s) 13, 42
MseI TTAA 1 cut(s) 96
NdeII GATC 2 cut(s) 12, 130
NlaIII CATG 1 cut(s) 145
PflFI GACNNNGTC 1 cut(s) 33
PsyI GACNNNGTC 1 cut(s) 33
SaqAI TTAA 1 cut(s) 96
Sau3AI GATC 2 cut(s) 12, 130
SetI ASST 3 cut(s) 53, 93, 138
SfaNI GCATC 1 cut(s) 64
Sse9I AATT 1 cut(s) 155
TasI AATT 1 cut(s) 155
Tru1I TTAA 1 cut(s) 96
Tru9I TTAA 1 cut(s) 96
TspDTI ATGAA 1 cut(s) 158
TspGWI ACGGA 1 cut(s) 49
Tth111I GACNNNGTC 1 cut(s) 33
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.