RchiOBHm_Chr6g0262891

Stores iron in a soluble, non-toxic, readily available form. Important for iron homeostasis. Iron is taken up in the ferrous form and deposited as ferric hydroxides after oxidation

Basic Information

Type: gene
Biological Identity
rosa_chinensis
6
N/A
Physical Location & Seq
Forward (+)
17647513 .. 17650710
3198 bp
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UTR
Exon/CDS
Intron
N/A

Sequence Viewer

Length: 351 bp
ATGTATGCCTACTTTGACAGGAACAATGTCGCACTCAGGGGTCTTGCATTGCCAAGTTTTTCAAGGAATCAAGTGAGGAAGAGAGAGGTCATGAATAAGCGTGGTGGAAGAGTGAAATTGCAAACAATACTGATGCCTCTCTCAGAGTTCGATCATGCTGAGAAAGGAGATGCTCTATATGGTAGCAAGGTGAAAAGCTTACCTGCTGTGCGTCGTTGTTTCAGTGTTGTTCCCCATGAACCTAGAGAAAATGAAGAAGAGGATGATATGTTAGGGCAAAGCTCATCAGAGAGTACTCCTCGAGTCATACAAGTGACTTTGAATGACAAGCTTCCAATAATAGTCAAGTAG

Protein Analysis

116

Amino Acids

13.2

Weight (kDa)

9.41

Isoelectric Point (pI)

62.52

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Orthologous Genes

No orthologs found for this gene in the current database.

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 1 cut(s) 211
AfaI GTAC 1 cut(s) 295
AfiI CCNNNNNNNGG 5 cut(s) 32, 61, 97, 571, 609
AgsI TTSAA 2 cut(s) 63, 322
AluBI AGCT 3 cut(s) 198, 282, 331
AluI AGCT 3 cut(s) 198, 282, 331
Ama87I CYCGRG 1 cut(s) 300
AsuHPI GGTGA 1 cut(s) 202
AvaI CYCGRG 1 cut(s) 300
BfaI CTAG 1 cut(s) 243
BfuAI ACCTGC 1 cut(s) 211
BmcAI AGTACT 1 cut(s) 295
BmeT110I CYCGRG 1 cut(s) 300
BmsI GCATC 2 cut(s) 123, 160
BplI GAGNNNNNCTC 2 cut(s) 283, 315
Bse3DI GCAATG 1 cut(s) 47
BseGI GGATG 1 cut(s) 268
BseMI GCAATG 1 cut(s) 47
BseMII CTCAG 3 cut(s) 49, 150, 156
BseRI GAGGAG 1 cut(s) 288
BsiHKCI CYCGRG 1 cut(s) 300
BsoBI CYCGRG 1 cut(s) 300
Bsp143I GATC 1 cut(s) 151
BspCNI CTCAG 3 cut(s) 48, 151, 155
BspHI TCATGA 1 cut(s) 90
BspMI ACCTGC 1 cut(s) 211
BsrDI GCAATG 1 cut(s) 47
BssMI GATC 1 cut(s) 151
Bst6I CTCTTC 3 cut(s) 74, 103, 252
BstDEI CTNAG 3 cut(s) 35, 142, 159
BstF5I GGATG 1 cut(s) 268
BstKTI GATC 1 cut(s) 154
BstMBI GATC 1 cut(s) 151
BtsCI GGATG 1 cut(s) 268
BtsIMutI CAGTG 1 cut(s) 229
BveI ACCTGC 1 cut(s) 211
CciI TCATGA 1 cut(s) 90
CseI GACGC 1 cut(s) 200
Csp6I GTAC 1 cut(s) 294
CviAII CATG 3 cut(s) 91, 155, 236
CviJI RGCY 3 cut(s) 198, 282, 331
CviKI_1 RGCY 3 cut(s) 198, 282, 331
CviQI GTAC 1 cut(s) 294
DdeI CTNAG 3 cut(s) 35, 142, 159
DpnI GATC 1 cut(s) 153
DpnII GATC 1 cut(s) 151
Eam1104I CTCTTC 3 cut(s) 74, 103, 252
EarI CTCTTC 3 cut(s) 74, 103, 252
Eco88I CYCGRG 1 cut(s) 300
FaeI CATG 3 cut(s) 94, 158, 239
FaiI YATR 8 cut(s) 6, 92, 156, 178, 180, 237, 269, 308
FatI CATG 3 cut(s) 90, 154, 235
FokI GGATG 1 cut(s) 275
FspBI CTAG 1 cut(s) 243
HgaI GACGC 1 cut(s) 200
Hin1II CATG 3 cut(s) 94, 158, 239
HindIII AAGCTT 2 cut(s) 196, 329
HinfI GANTC 2 cut(s) 67, 303
HphI GGTGA 1 cut(s) 202
Hpy188I TCNGA 2 cut(s) 145, 289
Hpy188III TCNNGA 1 cut(s) 91
Hpy99I CGWCG 1 cut(s) 216
HpyCH4V TGCA 2 cut(s) 47, 121
HpyF3I CTNAG 3 cut(s) 35, 142, 159
Hsp92II CATG 3 cut(s) 94, 158, 239
Kzo9I GATC 1 cut(s) 151
LpnPI CCDG 3 cut(s) 4, 22, 216
LweI GCATC 2 cut(s) 123, 160
MaeI CTAG 1 cut(s) 243
MaeIII GTNAC 1 cut(s) 313
MalI GATC 1 cut(s) 153
MboI GATC 1 cut(s) 151
MboII GAAGA 4 cut(s) 91, 120, 266, 269
MluCI AATT 1 cut(s) 116
MlyI GAGTC 1 cut(s) 312
MnlI CCTC 5 cut(s) 69, 79, 147, 253, 309
MslI CAYNNNNRTG 1 cut(s) 311
NdeII GATC 1 cut(s) 151
NlaIII CATG 3 cut(s) 94, 158, 239
NmuCI GTSAC 1 cut(s) 313
PaeR7I CTCGAG 1 cut(s) 300
PagI TCATGA 1 cut(s) 90
PfeI GAWTC 1 cut(s) 67
PleI GAGTC 1 cut(s) 311
PpsI GAGTC 1 cut(s) 311
PspXI VCTCGAGB 1 cut(s) 300
RsaI GTAC 1 cut(s) 295
RsaNI GTAC 1 cut(s) 294
RseI CAYNNNNRTG 1 cut(s) 311
Sau3AI GATC 1 cut(s) 151
ScaI AGTACT 1 cut(s) 295
SchI GAGTC 1 cut(s) 312
SetI ASST 7 cut(s) 90, 192, 200, 205, 244, 284, 333
SfaNI GCATC 2 cut(s) 123, 160
Sfr274I CTCGAG 1 cut(s) 300
SlaI CTCGAG 1 cut(s) 300
SmiMI CAYNNNNRTG 1 cut(s) 311
SmlI CTYRAG 1 cut(s) 300
SmoI CTYRAG 1 cut(s) 300
Sse9I AATT 1 cut(s) 116
SspMI CTAG 1 cut(s) 243
TaqI TCGA 2 cut(s) 150, 301
TasI AATT 1 cut(s) 116
TatI WGTACW 1 cut(s) 293
TfiI GAWTC 1 cut(s) 67
TscAI CASTG 1 cut(s) 229
TseFI GTSAC 1 cut(s) 313
Tsp45I GTSAC 1 cut(s) 313
TspDTI ATGAA 3 cut(s) 107, 252, 267
TspRI CASTG 1 cut(s) 229
XhoI CTCGAG 1 cut(s) 300
XspI CTAG 1 cut(s) 243
ZrmI AGTACT 1 cut(s) 295
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.