Lignin degradation and detoxification of lignin-derived products
| Domain Name | Pfam ID | Position | E-value | Description |
|---|---|---|---|---|
| Cu-oxidase_2 | PF07731 | 2 - 39 | 3e-15 | Multicopper oxidase |
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
No orthologs found for this gene in the current database.
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AarI | CACCTGC | 1 cut(s) | 137 |
| Acc36I | ACCTGC | 1 cut(s) | 137 |
| AjnI | CCWGG | 1 cut(s) | 40 |
| AluBI | AGCT | 1 cut(s) | 73 |
| AluI | AGCT | 1 cut(s) | 73 |
| ApeKI | GCWGC | 2 cut(s) | 14, 73 |
| BbvI | GCAGC | 1 cut(s) | 60 |
| BciT130I | CCWGG | 1 cut(s) | 42 |
| BfmI | CTRYAG | 1 cut(s) | 130 |
| BfuAI | ACCTGC | 1 cut(s) | 137 |
| BisI | GCNGC | 2 cut(s) | 15, 74 |
| BlsI | GCNGC | 2 cut(s) | 16, 75 |
| Bme1390I | CCNGG | 1 cut(s) | 42 |
| BmrFI | CCNGG | 1 cut(s) | 42 |
| BseBI | CCWGG | 1 cut(s) | 42 |
| BseXI | GCAGC | 1 cut(s) | 60 |
| BspMAI | CTGCAG | 1 cut(s) | 134 |
| BspMI | ACCTGC | 1 cut(s) | 137 |
| Bst2UI | CCWGG | 1 cut(s) | 42 |
| Bst4CI | ACNGT | 1 cut(s) | 62 |
| BstNI | CCWGG | 1 cut(s) | 42 |
| BstSCI | CCNGG | 1 cut(s) | 40 |
| BstSFI | CTRYAG | 1 cut(s) | 130 |
| BstV1I | GCAGC | 1 cut(s) | 60 |
| BstXI | CCANNNNNNTGG | 1 cut(s) | 48 |
| BtsIMutI | CAGTG | 1 cut(s) | 58 |
| BveI | ACCTGC | 1 cut(s) | 137 |
| CviAII | CATG | 1 cut(s) | 55 |
| CviJI | RGCY | 3 cut(s) | 14, 32, 73 |
| CviKI_1 | RGCY | 3 cut(s) | 14, 32, 73 |
| EcoRII | CCWGG | 1 cut(s) | 40 |
| FaeI | CATG | 1 cut(s) | 58 |
| FaiI | YATR | 4 cut(s) | 20, 56, 78, 83 |
| FatI | CATG | 1 cut(s) | 54 |
| Fnu4HI | GCNGC | 2 cut(s) | 15, 74 |
| Fsp4HI | GCNGC | 2 cut(s) | 15, 74 |
| GluI | GCNGC | 2 cut(s) | 15, 74 |
| Hin1II | CATG | 1 cut(s) | 58 |
| HpyAV | CCTTC | 1 cut(s) | 147 |
| HpyCH4III | ACNGT | 1 cut(s) | 62 |
| HpyCH4V | TGCA | 3 cut(s) | 58, 76, 132 |
| Hsp92II | CATG | 1 cut(s) | 58 |
| LmnI | GCTCC | 1 cut(s) | 70 |
| LpnPI | CCDG | 5 cut(s) | 13, 27, 54, 132, 142 |
| Lsp1109I | GCAGC | 1 cut(s) | 60 |
| MaeIII | GTNAC | 1 cut(s) | 62 |
| MboII | GAAGA | 1 cut(s) | 106 |
| MnlI | CCTC | 1 cut(s) | 133 |
| MspR9I | CCNGG | 1 cut(s) | 42 |
| MvaI | CCWGG | 1 cut(s) | 42 |
| NlaIII | CATG | 1 cut(s) | 58 |
| NmuCI | GTSAC | 1 cut(s) | 62 |
| PaqCI | CACCTGC | 1 cut(s) | 137 |
| PkrI | GCNGC | 2 cut(s) | 16, 75 |
| Psp6I | CCWGG | 1 cut(s) | 40 |
| PspGI | CCWGG | 1 cut(s) | 40 |
| PstI | CTGCAG | 1 cut(s) | 134 |
| SatI | GCNGC | 2 cut(s) | 15, 74 |
| ScrFI | CCNGG | 1 cut(s) | 42 |
| SetI | ASST | 5 cut(s) | 26, 46, 75, 131, 139 |
| SfcI | CTRYAG | 1 cut(s) | 130 |
| SgeI | CNNG | 8 cut(s) | 40, 53, 54, 67, 79, 116, 131, 141 |
| StyD4I | CCNGG | 1 cut(s) | 40 |
| TaaI | ACNGT | 1 cut(s) | 62 |
| TscAI | CASTG | 1 cut(s) | 65 |
| TseFI | GTSAC | 1 cut(s) | 62 |
| TseI | GCWGC | 2 cut(s) | 14, 73 |
| Tsp45I | GTSAC | 1 cut(s) | 62 |
| TspDTI | ATGAA | 2 cut(s) | 43, 107 |
| TspRI | CASTG | 1 cut(s) | 65 |