RchiOBHm_Chr6g0268671

histone H3

Basic Information

Type: gene
Biological Identity
rosa_chinensis
6
Physical Location & Seq
Reverse (-)
25724626 .. 25724781
156 bp
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UTR
Exon/CDS
Intron
N/A

Sequence Viewer

Length: 156 bp
ATGAAGCAGCTGGCAACCAAGGCGACCTGGAAGTCATCTCCGGTGATCGAAGGACGGAAGAAGCTCCACCACTTCAGAGGGGGAACAGTGGCTCTGAGAGAGATCAAGAAGTACCAAAAGAGCACGGAGTTTCTGATATGCAAGCTTCCATTCTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
Pfam Domains
Protein Families

Protein Analysis

51

Amino Acids

5.93

Weight (kDa)

10.36

Isoelectric Point (pI)

47.22

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0030367)

Species Orthologous Gene IDs
rosa_chinensis RchiOBHm_Chr6g0268671 RchiOBHm_Chr6g0268771

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 31
AcuI CTGAAG 1 cut(s) 58
AfaI GTAC 1 cut(s) 113
AjnI CCWGG 1 cut(s) 26
AluBI AGCT 3 cut(s) 10, 64, 145
AluI AGCT 3 cut(s) 10, 64, 145
Alw21I GWGCWC 1 cut(s) 125
ApeKI GCWGC 1 cut(s) 7
AsuHPI GGTGA 1 cut(s) 55
Bbv12I GWGCWC 1 cut(s) 125
BbvI GCAGC 1 cut(s) 19
BciT130I CCWGG 1 cut(s) 28
BisI GCNGC 1 cut(s) 8
BlsI GCNGC 1 cut(s) 9
Bme1390I CCNGG 1 cut(s) 28
BmrFI CCNGG 1 cut(s) 28
BsaJI CCNNGG 1 cut(s) 18
BsaWI WCCGGW 1 cut(s) 40
BseBI CCWGG 1 cut(s) 28
BseDI CCNNGG 1 cut(s) 18
BseMII CTCAG 1 cut(s) 86
BseXI GCAGC 1 cut(s) 19
BsiHKAI GWGCWC 1 cut(s) 125
BsiSI CCGG 1 cut(s) 41
Bsp1286I GDGCHC 1 cut(s) 125
Bsp143I GATC 2 cut(s) 45, 102
BspCNI CTCAG 1 cut(s) 87
BssECI CCNNGG 1 cut(s) 18
BssMI GATC 2 cut(s) 45, 102
BssT1I CCWWGG 1 cut(s) 18
Bst2UI CCWGG 1 cut(s) 28
Bst4CI ACNGT 1 cut(s) 88
BstC8I GCNNGC 2 cut(s) 12, 143
BstDEI CTNAG 1 cut(s) 95
BstKTI GATC 2 cut(s) 48, 105
BstMBI GATC 2 cut(s) 45, 102
BstMWI GCNNNNNNNGC 1 cut(s) 20
BstNI CCWGG 1 cut(s) 28
BstSCI CCNGG 1 cut(s) 26
BstV1I GCAGC 1 cut(s) 19
BtsIMutI CAGTG 1 cut(s) 93
Cac8I GCNNGC 2 cut(s) 12, 143
Csp6I GTAC 1 cut(s) 112
CviJI RGCY 4 cut(s) 10, 64, 92, 145
CviKI_1 RGCY 4 cut(s) 10, 64, 92, 145
CviQI GTAC 1 cut(s) 112
DdeI CTNAG 1 cut(s) 95
DpnI GATC 2 cut(s) 47, 104
DpnII GATC 2 cut(s) 45, 102
DrdI GACNNNNNNGTC 1 cut(s) 31
DseDI GACNNNNNNGTC 1 cut(s) 31
Eco130I CCWWGG 1 cut(s) 18
Eco57I CTGAAG 1 cut(s) 58
EcoRII CCWGG 1 cut(s) 26
EcoT14I CCWWGG 1 cut(s) 18
ErhI CCWWGG 1 cut(s) 18
FaiI YATR 1 cut(s) 139
Fnu4HI GCNGC 1 cut(s) 8
Fsp4HI GCNGC 1 cut(s) 8
GluI GCNGC 1 cut(s) 8
HapII CCGG 1 cut(s) 41
HindIII AAGCTT 1 cut(s) 143
HpaII CCGG 1 cut(s) 41
HphI GGTGA 1 cut(s) 55
Hpy188I TCNGA 3 cut(s) 77, 96, 135
Hpy188III TCNNGA 1 cut(s) 106
HpyAV CCTTC 1 cut(s) 44
HpyCH4III ACNGT 1 cut(s) 88
HpyCH4V TGCA 1 cut(s) 141
HpyF10VI GCNNNNNNNGC 1 cut(s) 20
HpyF3I CTNAG 1 cut(s) 95
Kzo9I GATC 2 cut(s) 45, 102
LmnI GCTCC 1 cut(s) 69
LpnPI CCDG 3 cut(s) 13, 40, 54
Lsp1109I GCAGC 1 cut(s) 19
MalI GATC 2 cut(s) 47, 104
MboI GATC 2 cut(s) 45, 102
MboII GAAGA 1 cut(s) 70
MhlI GDGCHC 1 cut(s) 125
MnlI CCTC 1 cut(s) 71
MspA1I CMGCKG 1 cut(s) 10
MspI CCGG 1 cut(s) 41
MspR9I CCNGG 1 cut(s) 28
MvaI CCWGG 1 cut(s) 28
MwoI GCNNNNNNNGC 1 cut(s) 20
NdeII GATC 2 cut(s) 45, 102
PkrI GCNGC 1 cut(s) 9
Psp6I CCWGG 1 cut(s) 26
PspGI CCWGG 1 cut(s) 26
PvuII CAGCTG 1 cut(s) 10
RsaI GTAC 1 cut(s) 113
RsaNI GTAC 1 cut(s) 112
SatI GCNGC 1 cut(s) 8
Sau3AI GATC 2 cut(s) 45, 102
ScrFI CCNGG 1 cut(s) 28
SduI GDGCHC 1 cut(s) 125
SetI ASST 4 cut(s) 12, 29, 66, 147
SgeI CNNG 7 cut(s) 23, 31, 39, 40, 53, 118, 136
StyD4I CCNGG 1 cut(s) 26
StyI CCWWGG 1 cut(s) 18
TaaI ACNGT 1 cut(s) 88
TaqI TCGA 1 cut(s) 48
TscAI CASTG 1 cut(s) 93
TseI GCWGC 1 cut(s) 7
TspDTI ATGAA 1 cut(s) 17
TspGWI ACGGA 2 cut(s) 70, 140
TspRI CASTG 1 cut(s) 93
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.