RchiOBHm_Chr6g0270461

Protein of unknown function (DUF760)

Basic Information

Type: gene
Biological Identity
rosa_chinensis
6
N/A
Physical Location & Seq
Reverse (-)
28252051 .. 28252723
673 bp
Loading structure...
UTR
Exon/CDS
Intron
N/A

Sequence Viewer

Length: 123 bp
ATGGAGCTGTTTGTAAAGAGAGCACCCCTGCAGGTGGTTGATGCAATGCGCCAAACTGTGACAAACATGATTGGAACACTACCCCCACAATTTTTTACAGTCACAGTGTCCACAGTTGCCTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

40

Amino Acids

4.44

Weight (kDa)

8.5

Isoelectric Point (pI)

29.87

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
DUF760 PF05542 4 - 38 5.3e-06 Protein of unknown function (DUF760)
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

Orthologous Genes

No orthologs found for this gene in the current database.

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 22
Acc36I ACCTGC 1 cut(s) 22
AfiI CCNNNNNNNGG 1 cut(s) 34
AluBI AGCT 1 cut(s) 7
AluI AGCT 1 cut(s) 7
Alw21I GWGCWC 1 cut(s) 25
AspLEI GCGC 1 cut(s) 51
Bbv12I GWGCWC 1 cut(s) 25
BfmI CTRYAG 1 cut(s) 29
BfuAI ACCTGC 1 cut(s) 22
BmsI GCATC 1 cut(s) 31
Bsc4I CCNNNNNNNGG 1 cut(s) 34
Bse3DI GCAATG 1 cut(s) 51
BseLI CCNNNNNNNGG 1 cut(s) 34
BseMI GCAATG 1 cut(s) 51
BsiHKAI GWGCWC 1 cut(s) 25
BslI CCNNNNNNNGG 1 cut(s) 34
Bsp1286I GDGCHC 1 cut(s) 25
BspMAI CTGCAG 1 cut(s) 33
BspMI ACCTGC 1 cut(s) 22
BsrDI GCAATG 1 cut(s) 51
Bst4CI ACNGT 4 cut(s) 58, 100, 106, 115
BstHHI GCGC 1 cut(s) 51
BstSFI CTRYAG 1 cut(s) 29
BtsIMutI CAGTG 1 cut(s) 111
BveI ACCTGC 1 cut(s) 22
CfoI GCGC 1 cut(s) 51
CviAII CATG 1 cut(s) 67
CviJI RGCY 1 cut(s) 7
CviKI_1 RGCY 1 cut(s) 7
FaeI CATG 1 cut(s) 70
FaiI YATR 1 cut(s) 68
FatI CATG 1 cut(s) 66
GlaI GCGC 1 cut(s) 50
HhaI GCGC 1 cut(s) 51
Hin1II CATG 1 cut(s) 70
Hin6I GCGC 1 cut(s) 49
HinP1I GCGC 1 cut(s) 49
Hpy166II GTNNAC 1 cut(s) 111
Hpy8I GTNNAC 1 cut(s) 111
HpyCH4III ACNGT 4 cut(s) 58, 100, 106, 115
HpyCH4V TGCA 2 cut(s) 31, 44
Hsp92II CATG 1 cut(s) 70
HspAI GCGC 1 cut(s) 49
LmnI GCTCC 1 cut(s) 4
LpnPI CCDG 2 cut(s) 17, 41
LweI GCATC 1 cut(s) 31
MaeIII GTNAC 2 cut(s) 58, 100
MhlI GDGCHC 1 cut(s) 25
MluCI AATT 1 cut(s) 89
NlaIII CATG 1 cut(s) 70
NmuCI GTSAC 2 cut(s) 58, 100
PaqCI CACCTGC 1 cut(s) 22
PstI CTGCAG 1 cut(s) 33
SbfI CCTGCAGG 1 cut(s) 33
SdaI CCTGCAGG 1 cut(s) 33
SduI GDGCHC 1 cut(s) 25
SetI ASST 2 cut(s) 9, 36
SfaNI GCATC 1 cut(s) 31
SfcI CTRYAG 1 cut(s) 29
SgeI CNNG 3 cut(s) 40, 44, 79
Sse8387I CCTGCAGG 1 cut(s) 33
Sse9I AATT 1 cut(s) 89
TaaI ACNGT 4 cut(s) 58, 100, 106, 115
TasI AATT 1 cut(s) 89
TscAI CASTG 1 cut(s) 111
TseFI GTSAC 2 cut(s) 58, 100
Tsp45I GTSAC 2 cut(s) 58, 100
TspRI CASTG 1 cut(s) 111
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.