Belongs to the DEAD box helicase family
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Species | Orthologous Gene IDs |
|---|---|
| rosa_chinensis | RchiOBHm_Chr6g0275451 |
| rosa_samantha | Rh6DG201200 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AanI | TTATAA | 1 cut(s) | 172 |
| AclWI | GGATC | 1 cut(s) | 18 |
| AfaI | GTAC | 1 cut(s) | 137 |
| AfiI | CCNNNNNNNGG | 1 cut(s) | 96 |
| AluBI | AGCT | 2 cut(s) | 34, 143 |
| AluI | AGCT | 2 cut(s) | 34, 143 |
| AlwI | GGATC | 1 cut(s) | 18 |
| ApeKI | GCWGC | 1 cut(s) | 143 |
| BbvI | GCAGC | 1 cut(s) | 130 |
| BfaI | CTAG | 1 cut(s) | 102 |
| BisI | GCNGC | 1 cut(s) | 144 |
| BlsI | GCNGC | 1 cut(s) | 145 |
| BpmI | CTGGAG | 2 cut(s) | 56, 79 |
| BpuEI | CTTGAG | 1 cut(s) | 132 |
| Bsc4I | CCNNNNNNNGG | 1 cut(s) | 96 |
| Bse1I | ACTGG | 1 cut(s) | 62 |
| BseLI | CCNNNNNNNGG | 1 cut(s) | 96 |
| BseMII | CTCAG | 1 cut(s) | 39 |
| BseNI | ACTGG | 1 cut(s) | 62 |
| BseRI | GAGGAG | 2 cut(s) | 53, 136 |
| BseXI | GCAGC | 1 cut(s) | 130 |
| BslFI | GGGAC | 1 cut(s) | 68 |
| BslI | CCNNNNNNNGG | 1 cut(s) | 96 |
| BsmFI | GGGAC | 1 cut(s) | 68 |
| Bsp143I | GATC | 1 cut(s) | 10 |
| BspCNI | CTCAG | 1 cut(s) | 40 |
| BspPI | GGATC | 1 cut(s) | 18 |
| BsrI | ACTGG | 1 cut(s) | 62 |
| BssMI | GATC | 1 cut(s) | 10 |
| BstDEI | CTNAG | 1 cut(s) | 48 |
| BstKTI | GATC | 1 cut(s) | 13 |
| BstMBI | GATC | 1 cut(s) | 10 |
| BstV1I | GCAGC | 1 cut(s) | 130 |
| Csp6I | GTAC | 1 cut(s) | 136 |
| CviJI | RGCY | 4 cut(s) | 34, 143, 153, 165 |
| CviKI_1 | RGCY | 4 cut(s) | 34, 143, 153, 165 |
| CviQI | GTAC | 1 cut(s) | 136 |
| DdeI | CTNAG | 1 cut(s) | 48 |
| DpnI | GATC | 1 cut(s) | 12 |
| DpnII | GATC | 1 cut(s) | 10 |
| FaiI | YATR | 3 cut(s) | 86, 119, 172 |
| FaqI | GGGAC | 1 cut(s) | 68 |
| Fnu4HI | GCNGC | 1 cut(s) | 144 |
| Fsp4HI | GCNGC | 1 cut(s) | 144 |
| FspBI | CTAG | 1 cut(s) | 102 |
| GluI | GCNGC | 1 cut(s) | 144 |
| GsuI | CTGGAG | 2 cut(s) | 56, 79 |
| HinfI | GANTC | 1 cut(s) | 106 |
| Hpy188I | TCNGA | 1 cut(s) | 71 |
| HpyF3I | CTNAG | 1 cut(s) | 48 |
| Kzo9I | GATC | 1 cut(s) | 10 |
| LmnI | GCTCC | 1 cut(s) | 140 |
| LpnPI | CCDG | 3 cut(s) | 20, 43, 151 |
| Lsp1109I | GCAGC | 1 cut(s) | 130 |
| MaeI | CTAG | 1 cut(s) | 102 |
| MalI | GATC | 1 cut(s) | 12 |
| MboI | GATC | 1 cut(s) | 10 |
| MnlI | CCTC | 7 cut(s) | 31, 45, 54, 67, 114, 120, 154 |
| MseI | TTAA | 1 cut(s) | 81 |
| NdeII | GATC | 1 cut(s) | 10 |
| PfeI | GAWTC | 1 cut(s) | 106 |
| PkrI | GCNGC | 1 cut(s) | 145 |
| PsiI | TTATAA | 1 cut(s) | 172 |
| RsaI | GTAC | 1 cut(s) | 137 |
| RsaNI | GTAC | 1 cut(s) | 136 |
| SaqAI | TTAA | 1 cut(s) | 81 |
| SatI | GCNGC | 1 cut(s) | 144 |
| Sau3AI | GATC | 1 cut(s) | 10 |
| SetI | ASST | 2 cut(s) | 36, 145 |
| SgeI | CNNG | 6 cut(s) | 47, 70, 83, 114, 123, 161 |
| SmlI | CTYRAG | 1 cut(s) | 147 |
| SmoI | CTYRAG | 1 cut(s) | 147 |
| SspMI | CTAG | 1 cut(s) | 102 |
| TfiI | GAWTC | 1 cut(s) | 106 |
| Tru1I | TTAA | 1 cut(s) | 81 |
| Tru9I | TTAA | 1 cut(s) | 81 |
| TseI | GCWGC | 1 cut(s) | 143 |
| TspGWI | ACGGA | 1 cut(s) | 153 |
| XspI | CTAG | 1 cut(s) | 102 |