RchiOBHm_Chr6g0279651

Lysine histidine transporter-like

Basic Information

Type: gene
Biological Identity
rosa_chinensis
6
N/A
Physical Location & Seq
Reverse (-)
42738202 .. 42741103
2902 bp
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UTR
Exon/CDS
Intron
N/A

Sequence Viewer

Length: 183 bp
ATGGCAATGCTTTCATTTACTTTGTTCCGGCTAATTTTGGCCATGGGGAACTGTATGCTTGTCATTGGCATTCACATGGCAGCTCTGCACCATATGGCATGCTTGTCATTGGCATTCACATGGCAGCTCTACACCATATGGCTTCTCGTACGCCTACACGAATCTGACTCTGGAACTCGTTAA

Protein Analysis

60

Amino Acids

6.85

Weight (kDa)

7.91

Isoelectric Point (pI)

37.07

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Orthologous Genes

No orthologs found for this gene in the current database.

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AcoI YGGCCR 1 cut(s) 39
AfaI GTAC 1 cut(s) 150
AluBI AGCT 2 cut(s) 83, 127
AluI AGCT 2 cut(s) 83, 127
AoxI GGCC 1 cut(s) 39
ApeKI GCWGC 2 cut(s) 80, 124
BalI TGGCCA 1 cut(s) 41
BbvI GCAGC 2 cut(s) 92, 136
BisI GCNGC 2 cut(s) 81, 125
BlsI GCNGC 2 cut(s) 82, 126
BsaJI CCNNGG 1 cut(s) 42
Bse3DI GCAATG 1 cut(s) 12
BseDI CCNNGG 1 cut(s) 42
BseMI GCAATG 1 cut(s) 12
BseXI GCAGC 2 cut(s) 92, 136
BsgI GTGCAG 1 cut(s) 71
BshFI GGCC 1 cut(s) 41
BsiSI CCGG 1 cut(s) 28
BsiWI CGTACG 1 cut(s) 148
BsmI GAATGC 2 cut(s) 69, 113
BsnI GGCC 1 cut(s) 41
Bsp19I CCATGG 1 cut(s) 42
BspANI GGCC 1 cut(s) 41
BsrDI GCAATG 1 cut(s) 12
BssECI CCNNGG 1 cut(s) 42
BssT1I CCWWGG 1 cut(s) 42
Bst4CI ACNGT 1 cut(s) 53
BstC8I GCNNGC 1 cut(s) 100
BstDSI CCRYGG 1 cut(s) 42
BstNSI RCATGY 1 cut(s) 102
BstV1I GCAGC 2 cut(s) 92, 136
BsuRI GGCC 1 cut(s) 41
BtgI CCRYGG 1 cut(s) 42
Cac8I GCNNGC 1 cut(s) 100
Csp6I GTAC 1 cut(s) 149
CviAII CATG 4 cut(s) 43, 76, 99, 120
CviJI RGCY 5 cut(s) 31, 41, 83, 127, 142
CviKI_1 RGCY 5 cut(s) 31, 41, 83, 127, 142
CviQI GTAC 1 cut(s) 149
EaeI YGGCCR 1 cut(s) 39
Eco130I CCWWGG 1 cut(s) 42
EcoT14I CCWWGG 1 cut(s) 42
ErhI CCWWGG 1 cut(s) 42
FaeI CATG 4 cut(s) 46, 79, 102, 123
FaiI YATR 9 cut(s) 44, 56, 77, 93, 95, 100, 121, 137, 139
FatI CATG 4 cut(s) 42, 75, 98, 119
FauNDI CATATG 2 cut(s) 93, 137
Fnu4HI GCNGC 2 cut(s) 81, 125
Fsp4HI GCNGC 2 cut(s) 81, 125
GluI GCNGC 2 cut(s) 81, 125
HaeIII GGCC 1 cut(s) 41
HapII CCGG 1 cut(s) 28
Hin1II CATG 4 cut(s) 46, 79, 102, 123
HinfI GANTC 2 cut(s) 161, 167
HpaII CCGG 1 cut(s) 28
Hpy188I TCNGA 1 cut(s) 166
Hpy188III TCNNGA 1 cut(s) 171
HpyCH4III ACNGT 1 cut(s) 53
HpyCH4V TGCA 1 cut(s) 88
Hsp92II CATG 4 cut(s) 46, 79, 102, 123
LpnPI CCDG 2 cut(s) 41, 156
Lsp1109I GCAGC 2 cut(s) 92, 136
MlsI TGGCCA 1 cut(s) 41
MluCI AATT 1 cut(s) 33
MluNI TGGCCA 1 cut(s) 41
MlyI GAGTC 1 cut(s) 161
Mox20I TGGCCA 1 cut(s) 41
MscI TGGCCA 1 cut(s) 41
MseI TTAA 1 cut(s) 181
MslI CAYNNNNRTG 2 cut(s) 74, 118
Msp20I TGGCCA 1 cut(s) 41
MspI CCGG 1 cut(s) 28
Mva1269I GAATGC 2 cut(s) 69, 113
NcoI CCATGG 1 cut(s) 42
NdeI CATATG 2 cut(s) 93, 137
NlaIII CATG 4 cut(s) 46, 79, 102, 123
NspI RCATGY 1 cut(s) 102
PaeI GCATGC 1 cut(s) 102
PctI GAATGC 2 cut(s) 69, 113
PfeI GAWTC 1 cut(s) 161
Pfl23II CGTACG 1 cut(s) 148
PkrI GCNGC 2 cut(s) 82, 126
PleI GAGTC 1 cut(s) 161
PpsI GAGTC 1 cut(s) 161
PspLI CGTACG 1 cut(s) 148
RsaI GTAC 1 cut(s) 150
RsaNI GTAC 1 cut(s) 149
RseI CAYNNNNRTG 2 cut(s) 74, 118
SaqAI TTAA 1 cut(s) 181
SatI GCNGC 2 cut(s) 81, 125
SchI GAGTC 1 cut(s) 161
SetI ASST 2 cut(s) 85, 129
SgeI CNNG 9 cut(s) 40, 55, 71, 88, 111, 115, 132, 158, 170
SmiMI CAYNNNNRTG 2 cut(s) 74, 118
SphI GCATGC 1 cut(s) 102
Sse9I AATT 1 cut(s) 33
StyI CCWWGG 1 cut(s) 42
TaaI ACNGT 1 cut(s) 53
TasI AATT 1 cut(s) 33
TfiI GAWTC 1 cut(s) 161
Tru1I TTAA 1 cut(s) 181
Tru9I TTAA 1 cut(s) 181
TseI GCWGC 2 cut(s) 80, 124
XceI RCATGY 1 cut(s) 102
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.