RchiOBHm_Chr6g0287391

Glutathione gamma-glutamylcysteinyltransferase

Basic Information

Type: gene
Biological Identity
rosa_chinensis
6
N/A
Physical Location & Seq
Reverse (-)
50748167 .. 50748449
283 bp
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UTR
Exon/CDS
Intron
N/A

Sequence Viewer

Length: 195 bp
ATGGCGGTGGCTGGTCTTTACCGGAGAGAGCTTCCCTCTCCTCCTGCGATTGAGTTTGCTTCACCAGAAGGCAAGGGATCTGGATTTTTGCAGAAACTGTTTTCTGAAGCTTTGGGAAATGGAACCATGGAAGGGTTTTTGAAGCTCATCTCTTACTACCAAACGCAATTGGAGCCGGCCTATTGTGGGTTGTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

64

Amino Acids

6.94

Weight (kDa)

5.15

Isoelectric Point (pI)

56.67

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Phytochelatin PF05023 7 - 64 8.9e-11 Phytochelatin synthase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes

No orthologs found for this gene in the current database.

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AciI CCGC 1 cut(s) 5
AclWI GGATC 1 cut(s) 85
AcuI CTGAAG 1 cut(s) 126
AfiI CCNNNNNNNGG 2 cut(s) 132, 186
AgsI TTSAA 1 cut(s) 142
AluBI AGCT 3 cut(s) 31, 110, 145
AluI AGCT 3 cut(s) 31, 110, 145
AlwI GGATC 1 cut(s) 85
AlwNI CAGNNNCTG 1 cut(s) 97
AoxI GGCC 1 cut(s) 177
AsuHPI GGTGA 1 cut(s) 54
BmiI GGNNCC 2 cut(s) 124, 174
BplI GAGNNNNNCTC 2 cut(s) 20, 52
BsaJI CCNNGG 1 cut(s) 126
BsaWI WCCGGW 1 cut(s) 21
Bsc4I CCNNNNNNNGG 2 cut(s) 132, 186
Bse118I RCCGGY 1 cut(s) 175
BseDI CCNNGG 1 cut(s) 126
BseLI CCNNNNNNNGG 2 cut(s) 132, 186
BseRI GAGGAG 1 cut(s) 30
BshFI GGCC 1 cut(s) 179
BsiSI CCGG 2 cut(s) 22, 176
BslI CCNNNNNNNGG 2 cut(s) 132, 186
BsnI GGCC 1 cut(s) 179
Bsp143I GATC 1 cut(s) 77
Bsp19I CCATGG 1 cut(s) 126
BspACI CCGC 1 cut(s) 5
BspANI GGCC 1 cut(s) 179
BspLI GGNNCC 2 cut(s) 124, 174
BspPI GGATC 1 cut(s) 85
BsrFI RCCGGY 1 cut(s) 175
BssAI RCCGGY 1 cut(s) 175
BssECI CCNNGG 1 cut(s) 126
BssMI GATC 1 cut(s) 77
BssT1I CCWWGG 1 cut(s) 126
Bst4CI ACNGT 1 cut(s) 99
BstC8I GCNNGC 1 cut(s) 177
BstDSI CCRYGG 1 cut(s) 126
BstKTI GATC 1 cut(s) 80
BstMBI GATC 1 cut(s) 77
BstMWI GCNNNNNNNGC 1 cut(s) 172
BstX2I RGATCY 1 cut(s) 77
BstYI RGATCY 1 cut(s) 77
BsuRI GGCC 1 cut(s) 179
BtgI CCRYGG 1 cut(s) 126
Cac8I GCNNGC 1 cut(s) 177
CaiI CAGNNNCTG 1 cut(s) 97
Cfr10I RCCGGY 1 cut(s) 175
CviAII CATG 1 cut(s) 127
CviJI RGCY 6 cut(s) 11, 31, 110, 145, 175, 179
CviKI_1 RGCY 6 cut(s) 11, 31, 110, 145, 175, 179
DpnI GATC 1 cut(s) 79
DpnII GATC 1 cut(s) 77
Eco130I CCWWGG 1 cut(s) 126
Eco57I CTGAAG 1 cut(s) 126
EcoT14I CCWWGG 1 cut(s) 126
ErhI CCWWGG 1 cut(s) 126
FaeI CATG 1 cut(s) 130
FaiI YATR 1 cut(s) 128
FatI CATG 1 cut(s) 126
HaeIII GGCC 1 cut(s) 179
HapII CCGG 2 cut(s) 22, 176
Hin1II CATG 1 cut(s) 130
HindIII AAGCTT 1 cut(s) 108
HpaII CCGG 2 cut(s) 22, 176
HphI GGTGA 1 cut(s) 54
Hpy188I TCNGA 1 cut(s) 106
Hpy188III TCNNGA 1 cut(s) 81
HpyAV CCTTC 2 cut(s) 62, 125
HpyCH4III ACNGT 1 cut(s) 99
HpyCH4V TGCA 1 cut(s) 91
HpyF10VI GCNNNNNNNGC 1 cut(s) 172
Hsp92II CATG 1 cut(s) 130
KroI GCCGGC 1 cut(s) 175
KroNI GCCGGC 1 cut(s) 177
Kzo9I GATC 1 cut(s) 77
LmnI GCTCC 1 cut(s) 172
LpnPI CCDG 5 cut(s) 35, 57, 66, 78, 189
MalI GATC 1 cut(s) 79
MboI GATC 1 cut(s) 77
MfeI CAATTG 1 cut(s) 167
MflI RGATCY 1 cut(s) 77
MluCI AATT 1 cut(s) 167
MnlI CCTC 2 cut(s) 46, 51
MroNI GCCGGC 1 cut(s) 175
MspI CCGG 2 cut(s) 22, 176
MunI CAATTG 1 cut(s) 167
MwoI GCNNNNNNNGC 1 cut(s) 172
NaeI GCCGGC 1 cut(s) 177
NcoI CCATGG 1 cut(s) 126
NdeII GATC 1 cut(s) 77
NgoMIV GCCGGC 1 cut(s) 175
NlaIII CATG 1 cut(s) 130
NlaIV GGNNCC 2 cut(s) 124, 174
PdiI GCCGGC 1 cut(s) 177
PspN4I GGNNCC 2 cut(s) 124, 174
PstNI CAGNNNCTG 1 cut(s) 97
PsuI RGATCY 1 cut(s) 77
Sau3AI GATC 1 cut(s) 77
SetI ASST 3 cut(s) 33, 112, 147
SgeI CNNG 8 cut(s) 24, 34, 56, 77, 85, 93, 139, 188
Sse9I AATT 1 cut(s) 167
SsiI CCGC 1 cut(s) 5
StyI CCWWGG 1 cut(s) 126
TaaI ACNGT 1 cut(s) 99
TasI AATT 1 cut(s) 167
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.