RchiOBHm_Chr6g0299941

Belongs to the cytochrome P450 family

Basic Information

Type: gene
Biological Identity
rosa_chinensis
6
N/A
Physical Location & Seq
Forward (+)
60903302 .. 60904067
766 bp
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UTR
Exon/CDS
Intron
N/A

Sequence Viewer

Length: 354 bp
ATGACGAATAATATCGTTGAAGATTTTCCAGCAACGTCGTTTTCGATCCTTGTTGCACTCGCTGCTCTTTCGATTCTTTTCTGTTGCTATATGTCAAATTCACCAAGAATTATAAGGGATCATATGCCAAACGCCATACTGTGCCAGGGCTCGGTGACAAGACGTTCCTCCATCTCCATGAGAAAGCTATCGACGGCGCTAAAGGTTCTCACTTCCAATAAATGTTTGATTGCAGCAAGTGACTACGATGATTTTCACAAGATGACCAAACGATGCGTATTCCAAAATGTTCTTGGACCAAATGCTCAGGTATATACCTACATATTGACAATTATTTGCGTACATAAAGTCTAA

Protein Analysis

117

Amino Acids

13.06

Weight (kDa)

9.19

Isoelectric Point (pI)

53.17

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Orthologous Genes

No orthologs found for this gene in the current database.

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 113
AclWI GGATC 2 cut(s) 40, 126
AcsI RAATTY 1 cut(s) 97
AfaI GTAC 1 cut(s) 342
AfiI CCNNNNNNNGG 1 cut(s) 151
AgsI TTSAA 1 cut(s) 20
AjnI CCWGG 1 cut(s) 144
AluBI AGCT 1 cut(s) 187
AluI AGCT 1 cut(s) 187
AlwI GGATC 2 cut(s) 40, 126
ApeKI GCWGC 2 cut(s) 62, 233
ApoI RAATTY 1 cut(s) 97
Asp700I GAANNNNTTC 1 cut(s) 24
AspLEI GCGC 1 cut(s) 199
AspS9I GGNCC 1 cut(s) 296
AsuHPI GGTGA 2 cut(s) 93, 166
AvaII GGWCC 1 cut(s) 296
BanII GRGCYC 1 cut(s) 152
BbvI GCAGC 2 cut(s) 49, 245
BccI CCATC 1 cut(s) 179
BceAI ACGGC 1 cut(s) 210
BciT130I CCWGG 1 cut(s) 146
BfoI RGCGCY 1 cut(s) 200
BisI GCNGC 2 cut(s) 63, 234
BlsI GCNGC 2 cut(s) 64, 235
Bme1390I CCNGG 1 cut(s) 146
Bme18I GGWCC 1 cut(s) 296
BmgT120I GGNCC 1 cut(s) 296
BmrFI CCNGG 1 cut(s) 146
BmsI GCATC 1 cut(s) 263
Bpu10I CCTNAGC 1 cut(s) 306
BsaJI CCNNGG 1 cut(s) 145
Bsc4I CCNNNNNNNGG 1 cut(s) 151
BseBI CCWGG 1 cut(s) 146
BseDI CCNNGG 1 cut(s) 145
BseLI CCNNNNNNNGG 1 cut(s) 151
BseMII CTCAG 1 cut(s) 320
BseXI GCAGC 2 cut(s) 49, 245
BslI CCNNNNNNNGG 1 cut(s) 151
Bsp1286I GDGCHC 1 cut(s) 152
Bsp143I GATC 2 cut(s) 45, 118
BspCNI CTCAG 1 cut(s) 319
BspPI GGATC 2 cut(s) 40, 126
BssECI CCNNGG 1 cut(s) 145
BssMI GATC 2 cut(s) 45, 118
Bst2UI CCWGG 1 cut(s) 146
Bst4CI ACNGT 1 cut(s) 141
BstAPI GCANNNNNTGC 1 cut(s) 62
BstDEI CTNAG 1 cut(s) 306
BstH2I RGCGCY 1 cut(s) 200
BstHHI GCGC 1 cut(s) 199
BstKTI GATC 2 cut(s) 48, 121
BstMBI GATC 2 cut(s) 45, 118
BstMWI GCNNNNNNNGC 1 cut(s) 62
BstNI CCWGG 1 cut(s) 146
BstSCI CCNGG 1 cut(s) 144
BstV1I GCAGC 2 cut(s) 49, 245
CfoI GCGC 1 cut(s) 199
Cfr13I GGNCC 1 cut(s) 296
Csp6I GTAC 1 cut(s) 341
CviAII CATG 1 cut(s) 178
CviJI RGCY 2 cut(s) 150, 187
CviKI_1 RGCY 2 cut(s) 150, 187
CviQI GTAC 1 cut(s) 341
DdeI CTNAG 1 cut(s) 306
DpnI GATC 2 cut(s) 47, 120
DpnII GATC 2 cut(s) 45, 118
Eco24I GRGCYC 1 cut(s) 152
Eco47I GGWCC 1 cut(s) 296
EcoRII CCWGG 1 cut(s) 144
EcoT38I GRGCYC 1 cut(s) 152
FaeI CATG 1 cut(s) 181
FatI CATG 1 cut(s) 177
FauNDI CATATG 1 cut(s) 123
Fnu4HI GCNGC 2 cut(s) 63, 234
FriOI GRGCYC 1 cut(s) 152
Fsp4HI GCNGC 2 cut(s) 63, 234
GlaI GCGC 1 cut(s) 198
GluI GCNGC 2 cut(s) 63, 234
HaeII RGCGCY 1 cut(s) 200
HhaI GCGC 1 cut(s) 199
Hin1II CATG 1 cut(s) 181
Hin6I GCGC 1 cut(s) 197
HinP1I GCGC 1 cut(s) 197
HinfI GANTC 1 cut(s) 73
HphI GGTGA 2 cut(s) 93, 166
Hpy99I CGWCG 2 cut(s) 40, 196
HpyCH4III ACNGT 1 cut(s) 141
HpyCH4IV ACGT 2 cut(s) 35, 163
HpyCH4V TGCA 2 cut(s) 56, 233
HpyF10VI GCNNNNNNNGC 1 cut(s) 62
HpyF3I CTNAG 1 cut(s) 306
HpySE526I ACGT 2 cut(s) 35, 163
Hsp92II CATG 1 cut(s) 181
HspAI GCGC 1 cut(s) 197
Kzo9I GATC 2 cut(s) 45, 118
LpnPI CCDG 4 cut(s) 42, 131, 158, 293
Lsp1109I GCAGC 2 cut(s) 49, 245
LweI GCATC 1 cut(s) 263
MaeII ACGT 2 cut(s) 35, 163
MaeIII GTNAC 2 cut(s) 154, 239
MalI GATC 2 cut(s) 47, 120
MboI GATC 2 cut(s) 45, 118
MboII GAAGA 1 cut(s) 32
MhlI GDGCHC 1 cut(s) 152
MluCI AATT 3 cut(s) 97, 108, 330
MnlI CCTC 1 cut(s) 178
MroXI GAANNNNTTC 1 cut(s) 24
MslI CAYNNNNRTG 1 cut(s) 176
MspR9I CCNGG 1 cut(s) 146
MvaI CCWGG 1 cut(s) 146
MwoI GCNNNNNNNGC 1 cut(s) 62
NdeI CATATG 1 cut(s) 123
NdeII GATC 2 cut(s) 45, 118
NlaIII CATG 1 cut(s) 181
NmuCI GTSAC 2 cut(s) 154, 239
PcsI WCGNNNNNNNCGW 1 cut(s) 41
PdmI GAANNNNTTC 1 cut(s) 24
PfeI GAWTC 1 cut(s) 73
PkrI GCNGC 2 cut(s) 64, 235
PsiI TTATAA 1 cut(s) 113
Psp6I CCWGG 1 cut(s) 144
PspGI CCWGG 1 cut(s) 144
PspPI GGNCC 1 cut(s) 296
RsaI GTAC 1 cut(s) 342
RsaNI GTAC 1 cut(s) 341
RseI CAYNNNNRTG 1 cut(s) 176
SatI GCNGC 2 cut(s) 63, 234
Sau3AI GATC 2 cut(s) 45, 118
Sau96I GGNCC 1 cut(s) 296
ScrFI CCNGG 1 cut(s) 146
SduI GDGCHC 1 cut(s) 152
SetI ASST 6 cut(s) 38, 166, 189, 207, 312, 320
SfaNI GCATC 1 cut(s) 263
SinI GGWCC 1 cut(s) 296
SmiMI CAYNNNNRTG 1 cut(s) 176
Sse9I AATT 3 cut(s) 97, 108, 330
StyD4I CCNGG 1 cut(s) 144
TaaI ACNGT 1 cut(s) 141
TaiI ACGT 2 cut(s) 38, 166
TaqI TCGA 3 cut(s) 44, 71, 191
TasI AATT 3 cut(s) 97, 108, 330
TfiI GAWTC 1 cut(s) 73
TseFI GTSAC 2 cut(s) 154, 239
TseI GCWGC 2 cut(s) 62, 233
Tsp45I GTSAC 2 cut(s) 154, 239
VpaK11BI GGWCC 1 cut(s) 296
XapI RAATTY 1 cut(s) 97
XcmI CCANNNNNNNNNTGG 1 cut(s) 290
XmnI GAANNNNTTC 1 cut(s) 24
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.